| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is livH [H]
Identifier: 91782151
GI number: 91782151
Start: 864381
End: 866039
Strand: Reverse
Name: livH [H]
Synonym: Bxe_A3684
Alternate gene names: 91782151
Gene position: 866039-864381 (Counterclockwise)
Preceding gene: 91782152
Following gene: 91782150
Centisome position: 17.69
GC content: 67.27
Gene sequence:
>1659_bases ATGGCGTCCTCATTCCTGACATCCACACGACGGTTCGCACAACGATTCGCCCGGCGGCTCGCACCGCGCATCGGCGGCAT GGCGCTCGTGCTCTTCGCCGGCGCGCCGCTGGCGGCCTTCGCACTGACCCCGGCCGATGTGGCGCCGCTTGCCGGCGACG ACTTCGATGCGAAATCCGCGGCCATCGACAAACTGATCGCCAATCACGACAAGGAGTCGATGGCGGTACTGAAGGCCCTG TCCGAAGACAGCGCGCTCGCCACCGACTCGGGCGCCGTGCTGCTGCAGGACGGCGACACCGCGAAGGACGCGGTCACCGG CAAGACCGTCGCCGCGGGCGACGCCCAGCCGGTCACGCTGAACAATCTGCTGCGCTCGAAAGTGGCGGGCGCACTGTCCG GCCTGCAACTCGATTCGCCAGACAGGGCAACGCGCGAAGCCGCGATCACCTCGTTGCTGCAGAACCCGGATCCGTCCATC AAACCGCTCGTCGATGCGGCTCGCGCGAAGGAAACCGATCCCGCGTTGAAGAAGCGCCTCGACACGCTGTGGGCCATGAC GGCGCTGCACGACGCCGATCCGGCCAAGCGCCTCGAAGCCGTGCAACTGGTGGCCGCCCGGCACGACCTCGACATGAACG AACTGCTGCGGCCGCTCATCGCGAAGAAGCCGGACGGCACCTTCGTGGAAGCCGACGACCGCGTGCGCGCCGCCGCGCAA AGCGGCATCGACGAACTCGACGCCATCCAGCGCCGCAGCCAGATCGCCGGCACGCTGTTCGCAGGCCTGTCGCTCGGCAG CGTGCTGCTGCTCGCCGCGCTGGGCCTCGCCATCACCTACGGGCTGATCGGCGTGATCAACATGGCGCACGGCGAATTCC TGATGATCGGCGCGTACGCCACCTACGTGGTGCAGAACCTCTTTCAGCGCTTCGCACCCGGCGCGTTCGACTGGTATCCG CTGCTGGCGGTGCCGGCGTCGTTCGCGGCGGCCGGCATCGTCGGCATCGTGCTCGAACGGCTGGTGCTGAAGCATCTGTA CGGCCGCCCGCTCGAAACGCTGCTGACCACTTTCGGCGTCAGCCTGATCCTGATTCAGGCGACCCGCATGCTGTTCGGCG CGCAGAACGTGCAGGTGGTCAACCCGGCGTGGATGAGCGGCGGCGTGACGGTGCTGCCCAATCTGATCCTGCCGTACAAC CGGCTGGCGATTCTCGCGTTCTCGCTGATCGTGGTCGGCATTGCGTGGGCCGTGCTCACGAAGACGCGTCTCGGTCTCTT CGTGCGCGCCGTCACGCAGAACCGGCGCATGGCGGCCTGCGTCGGCGTGAAGACCGCGCGGGTCGACTCGTATGCGTTCG CGTTCGGCGCGGGCATAGCCGGTTTGGGCGGCTGTGCGCTCTCGCAGATCGGCAACGTCGGACCGGACCTCGGCCAGAGC TACATCATCGATTCGTTCATGGCCGTGGTGCTGGGTGGCGTCGGTCAGTTGGCCGGCACGGTGATCGGCGGCTTCGGCCT CGGACTCGTCAGCAAGGCAATTGAGCCGTTCTGGGGCGCGGTGCTCGCCAAGATCGCGGTGCTCGTGCTGATCGTGTTGT TCATCCAGAAGCGTCCGCAGGGCATGTTCGCCCTCAAGGGCCGTAGCGCGGAGGCATGA
Upstream 100 bases:
>100_bases TTCCCGACGGTACGACTTTCGCGCGCAGCAACCCGACGGCGCAACTGCGGCGCGTGCCCACATACCGCGCCGCCCCGCCG GTTTTCCTTCAAGGGCCACT
Downstream 100 bases:
>100_bases GATGACGTCTGCAACTTCATCGGCTCACGTCGGCGCAAGCGGCGGCGCCCTGCCCGGCCGCGACGCGCAAGCGGGTTTCG CGCTCGGCCTGCCGCCGCGT
Product: branched chain amino acid ABC transporter inner membrane protein
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: LIV-I protein H [H]
Number of amino acids: Translated: 552; Mature: 551
Protein sequence:
>552_residues MASSFLTSTRRFAQRFARRLAPRIGGMALVLFAGAPLAAFALTPADVAPLAGDDFDAKSAAIDKLIANHDKESMAVLKAL SEDSALATDSGAVLLQDGDTAKDAVTGKTVAAGDAQPVTLNNLLRSKVAGALSGLQLDSPDRATREAAITSLLQNPDPSI KPLVDAARAKETDPALKKRLDTLWAMTALHDADPAKRLEAVQLVAARHDLDMNELLRPLIAKKPDGTFVEADDRVRAAAQ SGIDELDAIQRRSQIAGTLFAGLSLGSVLLLAALGLAITYGLIGVINMAHGEFLMIGAYATYVVQNLFQRFAPGAFDWYP LLAVPASFAAAGIVGIVLERLVLKHLYGRPLETLLTTFGVSLILIQATRMLFGAQNVQVVNPAWMSGGVTVLPNLILPYN RLAILAFSLIVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAFGAGIAGLGGCALSQIGNVGPDLGQS YIIDSFMAVVLGGVGQLAGTVIGGFGLGLVSKAIEPFWGAVLAKIAVLVLIVLFIQKRPQGMFALKGRSAEA
Sequences:
>Translated_552_residues MASSFLTSTRRFAQRFARRLAPRIGGMALVLFAGAPLAAFALTPADVAPLAGDDFDAKSAAIDKLIANHDKESMAVLKAL SEDSALATDSGAVLLQDGDTAKDAVTGKTVAAGDAQPVTLNNLLRSKVAGALSGLQLDSPDRATREAAITSLLQNPDPSI KPLVDAARAKETDPALKKRLDTLWAMTALHDADPAKRLEAVQLVAARHDLDMNELLRPLIAKKPDGTFVEADDRVRAAAQ SGIDELDAIQRRSQIAGTLFAGLSLGSVLLLAALGLAITYGLIGVINMAHGEFLMIGAYATYVVQNLFQRFAPGAFDWYP LLAVPASFAAAGIVGIVLERLVLKHLYGRPLETLLTTFGVSLILIQATRMLFGAQNVQVVNPAWMSGGVTVLPNLILPYN RLAILAFSLIVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAFGAGIAGLGGCALSQIGNVGPDLGQS YIIDSFMAVVLGGVGQLAGTVIGGFGLGLVSKAIEPFWGAVLAKIAVLVLIVLFIQKRPQGMFALKGRSAEA >Mature_551_residues ASSFLTSTRRFAQRFARRLAPRIGGMALVLFAGAPLAAFALTPADVAPLAGDDFDAKSAAIDKLIANHDKESMAVLKALS EDSALATDSGAVLLQDGDTAKDAVTGKTVAAGDAQPVTLNNLLRSKVAGALSGLQLDSPDRATREAAITSLLQNPDPSIK PLVDAARAKETDPALKKRLDTLWAMTALHDADPAKRLEAVQLVAARHDLDMNELLRPLIAKKPDGTFVEADDRVRAAAQS GIDELDAIQRRSQIAGTLFAGLSLGSVLLLAALGLAITYGLIGVINMAHGEFLMIGAYATYVVQNLFQRFAPGAFDWYPL LAVPASFAAAGIVGIVLERLVLKHLYGRPLETLLTTFGVSLILIQATRMLFGAQNVQVVNPAWMSGGVTVLPNLILPYNR LAILAFSLIVVGIAWAVLTKTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAFGAGIAGLGGCALSQIGNVGPDLGQSY IIDSFMAVVLGGVGQLAGTVIGGFGLGLVSKAIEPFWGAVLAKIAVLVLIVLFIQKRPQGMFALKGRSAEA
Specific function: Part of the binding-protein-dependent transport system for branched-chain amino acids. Probably responsible for the translocation of the substrates across the membrane [H]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789866, Length=300, Percent_Identity=28, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 57985; Mature: 57854
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSFLTSTRRFAQRFARRLAPRIGGMALVLFAGAPLAAFALTPADVAPLAGDDFDAKSA CCCHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCHHHHCCCCHHCCCCCCCCCCHHHH AIDKLIANHDKESMAVLKALSEDSALATDSGAVLLQDGDTAKDAVTGKTVAAGDAQPVTL HHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHCCCEEECCCCCCCHH NNLLRSKVAGALSGLQLDSPDRATREAAITSLLQNPDPSIKPLVDAARAKETDPALKKRL HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHH DTLWAMTALHDADPAKRLEAVQLVAARHDLDMNELLRPLIAKKPDGTFVEADDRVRAAAQ HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEECCCHHHHHHHH SGIDELDAIQRRSQIAGTLFAGLSLGSVLLLAALGLAITYGLIGVINMAHGEFLMIGAYA HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHH TYVVQNLFQRFAPGAFDWYPLLAVPASFAAAGIVGIVLERLVLKHLYGRPLETLLTTFGV HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH SLILIQATRMLFGAQNVQVVNPAWMSGGVTVLPNLILPYNRLAILAFSLIVVGIAWAVLT HHHHHHHHHHHHCCCCCEEECCHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH KTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAFGAGIAGLGGCALSQIGNVGPDLGQS HHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHH YIIDSFMAVVLGGVGQLAGTVIGGFGLGLVSKAIEPFWGAVLAKIAVLVLIVLFIQKRPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GMFALKGRSAEA CEEEECCCCCCC >Mature Secondary Structure ASSFLTSTRRFAQRFARRLAPRIGGMALVLFAGAPLAAFALTPADVAPLAGDDFDAKSA CCHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCHHHHCCCCHHCCCCCCCCCCHHHH AIDKLIANHDKESMAVLKALSEDSALATDSGAVLLQDGDTAKDAVTGKTVAAGDAQPVTL HHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHCCCEEECCCCCCCHH NNLLRSKVAGALSGLQLDSPDRATREAAITSLLQNPDPSIKPLVDAARAKETDPALKKRL HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHH DTLWAMTALHDADPAKRLEAVQLVAARHDLDMNELLRPLIAKKPDGTFVEADDRVRAAAQ HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEECCCHHHHHHHH SGIDELDAIQRRSQIAGTLFAGLSLGSVLLLAALGLAITYGLIGVINMAHGEFLMIGAYA HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHH TYVVQNLFQRFAPGAFDWYPLLAVPASFAAAGIVGIVLERLVLKHLYGRPLETLLTTFGV HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH SLILIQATRMLFGAQNVQVVNPAWMSGGVTVLPNLILPYNRLAILAFSLIVVGIAWAVLT HHHHHHHHHHHHCCCCCEEECCHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH KTRLGLFVRAVTQNRRMAACVGVKTARVDSYAFAFGAGIAGLGGCALSQIGNVGPDLGQS HHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHH YIIDSFMAVVLGGVGQLAGTVIGGFGLGLVSKAIEPFWGAVLAKIAVLVLIVLFIQKRPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GMFALKGRSAEA CEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]