| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is wcaL [H]
Identifier: 91782131
GI number: 91782131
Start: 843144
End: 844292
Strand: Reverse
Name: wcaL [H]
Synonym: Bxe_A3704
Alternate gene names: 91782131
Gene position: 844292-843144 (Counterclockwise)
Preceding gene: 91782132
Following gene: 91782130
Centisome position: 17.25
GC content: 62.92
Gene sequence:
>1149_bases ATGAAGCCTGCCCTGAAGTCGACGCCCGCGTTACGCATTACACTCGTCTGTAACACCGCCTGGGCAATCTATACCTACCG GCAAGGGCTGATCCGCATGCTGGTGGGGCGCGGCGTGGACGTGACGGTGCTCGCGCCGCGCGACCGCACGTTCGAACTGC TCGTGGCGATGGGCTGCCGCTGCATCGAGTTGCCGGTCGCCTCCAAAGGCACCAGTCCGCGCGACGACCTGCGCACGCTG TATGCGCTCTACCGGCAATACCGGTCGATCCGCCCGCACGTGGTGTTCCATTACACGATCAAGCCGAATATCTACGGGTC GATCGCCGCGAGGCTGGCGGGCGTGCAATCGGTTGCGGTCACAACCGGATTGGGCTATGTGTTCATCCAGCAGAGCCGCG CCGCCCAGGTGGCCAAAAAACTGTATCGTTTCGCCTTCCGTTTCCCGCGCGAAATATGGTTTTTGAATCGCGACGATCAG GCCGCGTTTGTCGAACAGAATTTGTTGGTGCATCCTGAGCGCGCGAGGTTGTTGCATGGCGAAGGCGTGGACCTCGAACA GTTCGCCTTCACGCCGTTGCCCGAGCGGGCCGATTACCGCTTCGTGCTGATCGGGCGGCTGCTGTGGGACAAGGGCGTGG GCGAATATGTCGAAGCCGCGCGGCGTTTGCGTGAACGTTATCCGCATGCACGGTTCCAACTGCTCGGCCCGGTGGGTGTC GACAATCCCAGTGCGATTACGCGCGAAGAAGTGGCGGCGTGGGAACGGGAAGGCATCATCGAGTATCTTGGGGAGGCGCA TGACGTGCGGCCTTTCATCGCCGAAGCGGACTGCGTGGTGTTGCCATCGTATCGCGAAGGCGTGCCGCGCACGCTGATGG AAGCCTCGGCAATGGGCCGGCCCATCGTCACGACGGACGTGCCGGGCTGCCGCGAGGTGGTGGCGGACGGCGTCAACGGA TTGCTGTGCGAGGCGCGCAATGCAGCAAGCCTCGCGGCCACGCTGGCGCGCATGCTCGACATGAGCGGCGCCGAACGGCG GGCCCTGGCTGAACGCGGCCGCAAGAAAGTCGCGGAAGAATTCGACGAGCGCGTGGTCGTCGAAATGTATAAGGACCTGG TGCAGAAAATGACGGGCGTTTTACTTTAA
Upstream 100 bases:
>100_bases GCCTTACCGCGCGCTGCAACGGATCAAGCGCAGCCTGCTCACGTCGCGCGCGAGCCACTGAATCATTCGCCACCTCATTC ACCGCCGAGTTCGTTCCCGC
Downstream 100 bases:
>100_bases CGGAGCAACAGCATGACCACGAAGGGCACGATTCTGGTAACGGGCGGCGCGGGCTTTATCGGCTCGCACACCTGTGTCGA ACTGCTGAACGGCGGTTACG
Product: putative glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MKPALKSTPALRITLVCNTAWAIYTYRQGLIRMLVGRGVDVTVLAPRDRTFELLVAMGCRCIELPVASKGTSPRDDLRTL YALYRQYRSIRPHVVFHYTIKPNIYGSIAARLAGVQSVAVTTGLGYVFIQQSRAAQVAKKLYRFAFRFPREIWFLNRDDQ AAFVEQNLLVHPERARLLHGEGVDLEQFAFTPLPERADYRFVLIGRLLWDKGVGEYVEAARRLRERYPHARFQLLGPVGV DNPSAITREEVAAWEREGIIEYLGEAHDVRPFIAEADCVVLPSYREGVPRTLMEASAMGRPIVTTDVPGCREVVADGVNG LLCEARNAASLAATLARMLDMSGAERRALAERGRKKVAEEFDERVVVEMYKDLVQKMTGVLL
Sequences:
>Translated_382_residues MKPALKSTPALRITLVCNTAWAIYTYRQGLIRMLVGRGVDVTVLAPRDRTFELLVAMGCRCIELPVASKGTSPRDDLRTL YALYRQYRSIRPHVVFHYTIKPNIYGSIAARLAGVQSVAVTTGLGYVFIQQSRAAQVAKKLYRFAFRFPREIWFLNRDDQ AAFVEQNLLVHPERARLLHGEGVDLEQFAFTPLPERADYRFVLIGRLLWDKGVGEYVEAARRLRERYPHARFQLLGPVGV DNPSAITREEVAAWEREGIIEYLGEAHDVRPFIAEADCVVLPSYREGVPRTLMEASAMGRPIVTTDVPGCREVVADGVNG LLCEARNAASLAATLARMLDMSGAERRALAERGRKKVAEEFDERVVVEMYKDLVQKMTGVLL >Mature_382_residues MKPALKSTPALRITLVCNTAWAIYTYRQGLIRMLVGRGVDVTVLAPRDRTFELLVAMGCRCIELPVASKGTSPRDDLRTL YALYRQYRSIRPHVVFHYTIKPNIYGSIAARLAGVQSVAVTTGLGYVFIQQSRAAQVAKKLYRFAFRFPREIWFLNRDDQ AAFVEQNLLVHPERARLLHGEGVDLEQFAFTPLPERADYRFVLIGRLLWDKGVGEYVEAARRLRERYPHARFQLLGPVGV DNPSAITREEVAAWEREGIIEYLGEAHDVRPFIAEADCVVLPSYREGVPRTLMEASAMGRPIVTTDVPGCREVVADGVNG LLCEARNAASLAATLARMLDMSGAERRALAERGRKKVAEEFDERVVVEMYKDLVQKMTGVLL
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
Organism=Escherichia coli, GI1788357, Length=205, Percent_Identity=29.2682926829268, Blast_Score=72, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 42997; Mature: 42997
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPALKSTPALRITLVCNTAWAIYTYRQGLIRMLVGRGVDVTVLAPRDRTFELLVAMGCR CCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCE CIELPVASKGTSPRDDLRTLYALYRQYRSIRPHVVFHYTIKPNIYGSIAARLAGVQSVAV EEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHH TTGLGYVFIQQSRAAQVAKKLYRFAFRFPREIWFLNRDDQAAFVEQNLLVHPERARLLHG HHCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCEECCHHHHEECC EGVDLEQFAFTPLPERADYRFVLIGRLLWDKGVGEYVEAARRLRERYPHARFQLLGPVGV CCCCHHHHCCCCCCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCC DNPSAITREEVAAWEREGIIEYLGEAHDVRPFIAEADCVVLPSYREGVPRTLMEASAMGR CCCCHHHHHHHHHHHHCCHHHHHCCCCCCCHHHCCCCEEEECHHHCCCCHHHHHHHHCCC PIVTTDVPGCREVVADGVNGLLCEARNAASLAATLARMLDMSGAERRALAERGRKKVAEE CEEECCCCCHHHHHHCCCCCEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FDERVVVEMYKDLVQKMTGVLL HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKPALKSTPALRITLVCNTAWAIYTYRQGLIRMLVGRGVDVTVLAPRDRTFELLVAMGCR CCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCE CIELPVASKGTSPRDDLRTLYALYRQYRSIRPHVVFHYTIKPNIYGSIAARLAGVQSVAV EEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHH TTGLGYVFIQQSRAAQVAKKLYRFAFRFPREIWFLNRDDQAAFVEQNLLVHPERARLLHG HHCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCEECCHHHHEECC EGVDLEQFAFTPLPERADYRFVLIGRLLWDKGVGEYVEAARRLRERYPHARFQLLGPVGV CCCCHHHHCCCCCCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCC DNPSAITREEVAAWEREGIIEYLGEAHDVRPFIAEADCVVLPSYREGVPRTLMEASAMGR CCCCHHHHHHHHHHHHCCHHHHHCCCCCCCHHHCCCCEEEECHHHCCCCHHHHHHHHCCC PIVTTDVPGCREVVADGVNGLLCEARNAASLAATLARMLDMSGAERRALAERGRKKVAEE CEEECCCCCHHHHHHCCCCCEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FDERVVVEMYKDLVQKMTGVLL HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1710759; 11677609 [H]