| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is braC [H]
Identifier: 91782129
GI number: 91782129
Start: 840667
End: 841884
Strand: Reverse
Name: braC [H]
Synonym: Bxe_A3706
Alternate gene names: 91782129
Gene position: 841884-840667 (Counterclockwise)
Preceding gene: 91782130
Following gene: 91782128
Centisome position: 17.2
GC content: 61.74
Gene sequence:
>1218_bases ATGGGAATTCGCTTGAAAAGCGTTGTGGGTGCGCTCGCGCTTTGTGCCCTCGCCAATGTCGGCTATGCGGCGGATCCGAT CAAGATCGGCGTTGACGGACCTTTCACCGGCGGCTCGTCTTCGATGGGCGTGAGCATGCGAGACGGCGTGCGTCTCGCCA CTGCCGAGATCAATAAGGCCGGCGGCGTGCTGGGCCGCCAGATCGTGCTGGTGGAGCGCGACGACGAAGCGAAGAACGAA CGCGGCGTGCAGATTGCGCAAGAGCTGATCAATAAGGAAAAAGTCGTGGCGGTGGTCGGCTACATCAACACCGGCGTCGC CCTCGCCTCGCAGCGCTTCTTCCAGGAAGCGAAGATTCCGGTCTTCAACAACGTCGCCACAGGCAGCGTCGTGACGAAGC AGTTCACCGATCAGCCCGATAACTACGTGTTCCGCAATGCCGCCGCGGACCGCATCCAGGCGCCCATGATCGTCGAAGAA GCCGTGACCAGACGCGGTTTCAGGAAGGTCGCGATTCTCGCCGACTCGACCAACTATGGCCAGCTCGGCCGCGAAGACCT CGAAAAGGCGCTTGCCGCCAAAGGCGTAAAACCTGTCGCCGTCGAAAAATTCAATATCAAGGACGTCGACATGACCGCGC AGCTGCTCAAGGCCAAAGAGGCCGGCGCGGAAGCGGTGCTGACATATGGCATTGGACCGGAACTCGCTCAGATCGCCAAC GGCATGGCCAAGCTCGGCTGGAAAGTGCCGCTGATCGGCAGCTGGACTCTTTCGATGGCGAACTACATCGACAACGCGAG CACCAACGGCGAAGGCGCGCGCATGCCGCAGACCTTCATTCAGGAAGCGAACACGCCGAAACGCAAAGCCTTCATCGACG CATATCTGAAGGAATTCAAGCCGAAGAACAACCGCATCGACTCACCGGTTTCCGCCGCGCAAGGCTACGACTCGATCTAT CTGCTGGCCGCCGCGATCACCCAGGCCGGCTCGACCGACGGCCCGAAGGTGCGCGCCGCGCTCGAAAACCTCAATACGAA AGTGGAAGGCGTCGTGATGGTCTACGACAAGCCGTTCACCCACGACGACCACGAAGCGATCAGCCCGAACGTGCCGGTGG TCGGCGAGGTCAAGGGCGGCCGCGTGGTCTACGCGTACGAGGCCGACCGCAAAGGCGGCGGCCAGTTGCGCACCAAGCAG GCGAGCGCCGCGAATTGA
Upstream 100 bases:
>100_bases CTCACCGGTTGACGGTCAGGCTTCCTAAGAACGTTCGAATCGGCGCGCACGGGCCTGGTTCGAGGCTTCGTGCAAGAAAA GACATGCTACGGAGACAGTC
Downstream 100 bases:
>100_bases GCTCGAAATAAGCGCAGCAGCAGCATGTTACGGAGCCGCGCCCGCCTGAAGGCGGGCGCGGCTTTGCTTCATATCCGGTG AATTCGAGGGCGCCCGGCGA
Product: branched chain amino acid ABC transporter periplasmic ligand-binding protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: LIVAT-BP; Leu/Ile/Val/Thr/Ala-binding protein [H]
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MGIRLKSVVGALALCALANVGYAADPIKIGVDGPFTGGSSSMGVSMRDGVRLATAEINKAGGVLGRQIVLVERDDEAKNE RGVQIAQELINKEKVVAVVGYINTGVALASQRFFQEAKIPVFNNVATGSVVTKQFTDQPDNYVFRNAAADRIQAPMIVEE AVTRRGFRKVAILADSTNYGQLGREDLEKALAAKGVKPVAVEKFNIKDVDMTAQLLKAKEAGAEAVLTYGIGPELAQIAN GMAKLGWKVPLIGSWTLSMANYIDNASTNGEGARMPQTFIQEANTPKRKAFIDAYLKEFKPKNNRIDSPVSAAQGYDSIY LLAAAITQAGSTDGPKVRAALENLNTKVEGVVMVYDKPFTHDDHEAISPNVPVVGEVKGGRVVYAYEADRKGGGQLRTKQ ASAAN
Sequences:
>Translated_405_residues MGIRLKSVVGALALCALANVGYAADPIKIGVDGPFTGGSSSMGVSMRDGVRLATAEINKAGGVLGRQIVLVERDDEAKNE RGVQIAQELINKEKVVAVVGYINTGVALASQRFFQEAKIPVFNNVATGSVVTKQFTDQPDNYVFRNAAADRIQAPMIVEE AVTRRGFRKVAILADSTNYGQLGREDLEKALAAKGVKPVAVEKFNIKDVDMTAQLLKAKEAGAEAVLTYGIGPELAQIAN GMAKLGWKVPLIGSWTLSMANYIDNASTNGEGARMPQTFIQEANTPKRKAFIDAYLKEFKPKNNRIDSPVSAAQGYDSIY LLAAAITQAGSTDGPKVRAALENLNTKVEGVVMVYDKPFTHDDHEAISPNVPVVGEVKGGRVVYAYEADRKGGGQLRTKQ ASAAN >Mature_404_residues GIRLKSVVGALALCALANVGYAADPIKIGVDGPFTGGSSSMGVSMRDGVRLATAEINKAGGVLGRQIVLVERDDEAKNER GVQIAQELINKEKVVAVVGYINTGVALASQRFFQEAKIPVFNNVATGSVVTKQFTDQPDNYVFRNAAADRIQAPMIVEEA VTRRGFRKVAILADSTNYGQLGREDLEKALAAKGVKPVAVEKFNIKDVDMTAQLLKAKEAGAEAVLTYGIGPELAQIANG MAKLGWKVPLIGSWTLSMANYIDNASTNGEGARMPQTFIQEANTPKRKAFIDAYLKEFKPKNNRIDSPVSAAQGYDSIYL LAAAITQAGSTDGPKVRAALENLNTKVEGVVMVYDKPFTHDDHEAISPNVPVVGEVKGGRVVYAYEADRKGGGQLRTKQA SAAN
Specific function: Component of the high-affinity leucine, isoleucine, valine transport system I (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=291, Percent_Identity=22.680412371134, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI48994941, Length=296, Percent_Identity=21.6216216216216, Blast_Score=69, Evalue=7e-13,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 43231; Mature: 43100
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIRLKSVVGALALCALANVGYAADPIKIGVDGPFTGGSSSMGVSMRDGVRLATAEINKA CCEEHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCEECCCCCEEEEEHHHHC GGVLGRQIVLVERDDEAKNERGVQIAQELINKEKVVAVVGYINTGVALASQRFFQEAKIP CCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHCCCC VFNNVATGSVVTKQFTDQPDNYVFRNAAADRIQAPMIVEEAVTRRGFRKVAILADSTNYG EECCCCCCCCHHHHHCCCCCCEEECCCCHHHHCCCHHHHHHHHHCCCEEEEEEECCCCCC QLGREDLEKALAAKGVKPVAVEKFNIKDVDMTAQLLKAKEAGAEAVLTYGIGPELAQIAN CCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHH GMAKLGWKVPLIGSWTLSMANYIDNASTNGEGARMPQTFIQEANTPKRKAFIDAYLKEFK HHHHCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCC PKNNRIDSPVSAAQGYDSIYLLAAAITQAGSTDGPKVRAALENLNTKVEGVVMVYDKPFT CCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCC HDDHEAISPNVPVVGEVKGGRVVYAYEADRKGGGQLRTKQASAAN CCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCEEECCCCCCC >Mature Secondary Structure GIRLKSVVGALALCALANVGYAADPIKIGVDGPFTGGSSSMGVSMRDGVRLATAEINKA CEEHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCEECCCCCEEEEEHHHHC GGVLGRQIVLVERDDEAKNERGVQIAQELINKEKVVAVVGYINTGVALASQRFFQEAKIP CCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHCCCC VFNNVATGSVVTKQFTDQPDNYVFRNAAADRIQAPMIVEEAVTRRGFRKVAILADSTNYG EECCCCCCCCHHHHHCCCCCCEEECCCCHHHHCCCHHHHHHHHHCCCEEEEEEECCCCCC QLGREDLEKALAAKGVKPVAVEKFNIKDVDMTAQLLKAKEAGAEAVLTYGIGPELAQIAN CCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHH GMAKLGWKVPLIGSWTLSMANYIDNASTNGEGARMPQTFIQEANTPKRKAFIDAYLKEFK HHHHCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCC PKNNRIDSPVSAAQGYDSIYLLAAAITQAGSTDGPKVRAALENLNTKVEGVVMVYDKPFT CCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCC HDDHEAISPNVPVVGEVKGGRVVYAYEADRKGGGQLRTKQASAAN CCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2509433; 2120183; 10984043 [H]