| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is pmi [H]
Identifier: 91782122
GI number: 91782122
Start: 832613
End: 833647
Strand: Reverse
Name: pmi [H]
Synonym: Bxe_A3713
Alternate gene names: 91782122
Gene position: 833647-832613 (Counterclockwise)
Preceding gene: 91782123
Following gene: 91782119
Centisome position: 17.03
GC content: 64.06
Gene sequence:
>1035_bases ATGCATCTGCCTTACGAAGCCGTCAGCGCCAAGGCGGGGCATTCGCCCATGCCGGTCGAACGCTATCGCGCGATGGCGTG CGCACGGCAGCTGTTCGTGTTCTCGCAGGCCGGCGAAGCGGCCCACGCTCACGTGCTGTTCGAGGCGCTGCTGCACTACT TCAAGGACAGGCAACGCGGCGGCTGGTTTTACAGCATCGACGCACACGGTCAGCCGCTCGATACGACAAAGGATCTTTAT ACGCATGCGTTCCTGGTCTTCGCATGTGCCGAATACGCCGCACGCTTTGGCAGCGGGGACGCACTCGACGTCGTGCGTAG CACCTCGGCGCTCATCGAAACGCGTTTCGCCGCGCCACACGGATTGTTCAATGCGTCGCTCAACGCGGATTTCTCGACGG TGACCGGCACGCCGGTGCAAAACCCGTTGATGCATCTCACCGAAGCCTGGCTCGCCGCGCGCGAGTCGACCCAGGACAGC GCGTTCGACTCCGCGTTGCGCAAACTGGCCAATGCGATCGAACGCACCTTCGTGCATGCACCGACGGGCTGCATCGCGGA ACTCCCGGTGGGTGCCGACGACAACCGTCTGGAGCCCGGTCACCAGTTCGAGTGGTTCTGGCTGGCCAGACAGGCGAGCT CCGTACTGAACGGAACGGCGCTCGACGACGCGCTCTCGCGAGCCTTCATATTTGCCCAGCAGCATGGCGTGGATCCTGCA ACGGGGGGCGTATGCGCTTCGCTCGACGAAACCGGCCAGGTCAGGGACGCCACACAGCGCATCTGGGCACAAAGCGAATA TTTGCGTGCCCTTGCTACCCGCGACCACGACGCAGCAGGCGCCGCCGCACTGTCCGGGCAAATCGGGCGCTTTCGCCAGC GGTTTCTGCATCCGCTCGGCTGGCGTGAATGCATGACCGCGACCGGTGAAGTGTCGCGCGCTGACATGCCATCCACTACG CCTTATCATCTCGCCACCGCGTATGCGGCGCTCCCGGTTGAAGAGAACGCCGCTCGCAACGTTGCCGCGGCTTGA
Upstream 100 bases:
>100_bases GAATGCACCTGCCTCCCCGATCGCCTCTGCCGCCACGCTACGACACCACTTCGCACACGTCGTCCTGCCGATCTGGCGCG GGCCAGGCTTCAACAGCGCG
Downstream 100 bases:
>100_bases TTCCAGCCTGAAAAAACAAGGCCCGCGAACAGTTTCGGTTCGCGGGCCCTTACTCTTCAGGCCGCTCATCCCATGCGCGC GAATCAACCCATCAGGTACC
Product: putative isomerase
Products: NA
Alternate protein names: Phosphohexomutase; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MHLPYEAVSAKAGHSPMPVERYRAMACARQLFVFSQAGEAAHAHVLFEALLHYFKDRQRGGWFYSIDAHGQPLDTTKDLY THAFLVFACAEYAARFGSGDALDVVRSTSALIETRFAAPHGLFNASLNADFSTVTGTPVQNPLMHLTEAWLAARESTQDS AFDSALRKLANAIERTFVHAPTGCIAELPVGADDNRLEPGHQFEWFWLARQASSVLNGTALDDALSRAFIFAQQHGVDPA TGGVCASLDETGQVRDATQRIWAQSEYLRALATRDHDAAGAAALSGQIGRFRQRFLHPLGWRECMTATGEVSRADMPSTT PYHLATAYAALPVEENAARNVAAA
Sequences:
>Translated_344_residues MHLPYEAVSAKAGHSPMPVERYRAMACARQLFVFSQAGEAAHAHVLFEALLHYFKDRQRGGWFYSIDAHGQPLDTTKDLY THAFLVFACAEYAARFGSGDALDVVRSTSALIETRFAAPHGLFNASLNADFSTVTGTPVQNPLMHLTEAWLAARESTQDS AFDSALRKLANAIERTFVHAPTGCIAELPVGADDNRLEPGHQFEWFWLARQASSVLNGTALDDALSRAFIFAQQHGVDPA TGGVCASLDETGQVRDATQRIWAQSEYLRALATRDHDAAGAAALSGQIGRFRQRFLHPLGWRECMTATGEVSRADMPSTT PYHLATAYAALPVEENAARNVAAA >Mature_344_residues MHLPYEAVSAKAGHSPMPVERYRAMACARQLFVFSQAGEAAHAHVLFEALLHYFKDRQRGGWFYSIDAHGQPLDTTKDLY THAFLVFACAEYAARFGSGDALDVVRSTSALIETRFAAPHGLFNASLNADFSTVTGTPVQNPLMHLTEAWLAARESTQDS AFDSALRKLANAIERTFVHAPTGCIAELPVGADDNRLEPGHQFEWFWLARQASSVLNGTALDDALSRAFIFAQQHGVDPA TGGVCASLDETGQVRDATQRIWAQSEYLRALATRDHDAAGAAALSGQIGRFRQRFLHPLGWRECMTATGEVSRADMPSTT PYHLATAYAALPVEENAARNVAAA
Specific function: Unknown
COG id: COG2942
COG function: function code G; N-acyl-D-glucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N-acylglucosamine 2-epimerase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR010819 [H]
Pfam domain/function: PF07221 GlcNAc_2-epim [H]
EC number: =5.3.1.8 [H]
Molecular weight: Translated: 37465; Mature: 37465
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLPYEAVSAKAGHSPMPVERYRAMACARQLFVFSQAGEAAHAHVLFEALLHYFKDRQRG CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC GWFYSIDAHGQPLDTTKDLYTHAFLVFACAEYAARFGSGDALDVVRSTSALIETRFAAPH CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC GLFNASLNADFSTVTGTPVQNPLMHLTEAWLAARESTQDSAFDSALRKLANAIERTFVHA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC PTGCIAELPVGADDNRLEPGHQFEWFWLARQASSVLNGTALDDALSRAFIFAQQHGVDPA CCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC TGGVCASLDETGQVRDATQRIWAQSEYLRALATRDHDAAGAAALSGQIGRFRQRFLHPLG CCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC WRECMTATGEVSRADMPSTTPYHLATAYAALPVEENAARNVAAA HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHCCCCCCC >Mature Secondary Structure MHLPYEAVSAKAGHSPMPVERYRAMACARQLFVFSQAGEAAHAHVLFEALLHYFKDRQRG CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC GWFYSIDAHGQPLDTTKDLYTHAFLVFACAEYAARFGSGDALDVVRSTSALIETRFAAPH CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC GLFNASLNADFSTVTGTPVQNPLMHLTEAWLAARESTQDSAFDSALRKLANAIERTFVHA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC PTGCIAELPVGADDNRLEPGHQFEWFWLARQASSVLNGTALDDALSRAFIFAQQHGVDPA CCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC TGGVCASLDETGQVRDATQRIWAQSEYLRALATRDHDAAGAAALSGQIGRFRQRFLHPLG CCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC WRECMTATGEVSRADMPSTTPYHLATAYAALPVEENAARNVAAA HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1452036; 11481430 [H]