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The map label for this gene is rfaF [H]

Identifier: 91782120

GI number: 91782120

Start: 830349

End: 831497

Strand: Direct

Name: rfaF [H]

Synonym: Bxe_A3715

Alternate gene names: 91782120

Gene position: 830349-831497 (Clockwise)

Preceding gene: 91782118

Following gene: 91782121

Centisome position: 16.96

GC content: 55.35

Gene sequence:

>1149_bases
ATGAAAAATGAGCGTGGACAGAACCTTCTGAAGCGCGTCGATCTTGTTGTCGGCGGCGCCCTCCTGTCCCTGTTGGGGAT
GTTTCGCAGAAAGCGGCGCCCGCCGGCCGAATGCACGACGGCGGGCATTTTCGCGTTCGCCGCAATCGGCGATTCGATCT
TGTCCTCGATAATTATTTCTGAGTTGAGGAAAGTAAGAAACATTTCTAAAGTAGTAGTATTCGCATCGCGCAGCAACGCG
CGCATTTACGATCTGTTCGACGGGCTGGACGAGGTCGTGGTGGTTCCGTTGACGAGCCCGTTGAATGCGTTGAGGGAAAT
AAGGAAGCATGACGTCGATGTCCTGATCGATACGTCGCAATGGCCGAGGATCTCCGCCATTCTGGCCGCCTTCATGAAGG
CAAAGTTCACGGTTGGTTTCAAGACCCGGCGTCAGTTCCGCCATTACGCTTACGATGCATGCGTCGAACATCGCGACGAC
ATTCACGAACTGGATAATTTTAGAAGGCTGCTGCGGCCGCTAGGAATTGAATCCACGGAAACGCCCCAGATCGGCAAAAG
TATTCGCCCATCCGGTCTGCCGTTCGTCATGGACGATAGATATATCGTCTTTCACCCTTGGGCTTCTGGAACAAATTTCG
CCATGCGCGAGTGGCCAGCGGAGTACTGGCAAAAGTTCGCCCGCATGCTGATTGGGAGTGGATACGCCATTGTCATCACC
GGGGGGCCGGAAGACGCTGCACGGGCGCAGCAACTCGTCGACCTGATCGGCAGCAGCAAGGTGGTCAGCGTCGCGGCCAA
GGTGAGCCTCGCCGAGGTGGTGGGAATCGTAAGGCGGGCGGACTGCATAGTTTGCGTGAACACCGGCATCATGCATTTGT
CCGCAATGCTGGATACCCCGATGATCAGTTTGCATGGTCCAACCAATCCATTCCGATGGGGCCCTGTCAGTAAGGAGCGC
GGCGTCCTCGCGGTGTCCAGACAGGACGGCGGAATGTTTCTGAACCTCGGGTTCGAATATCCGAAAGATGCGAAGTATGT
GATGGACAAGATAAGCGTCGCTTCTGTCGCCGACGTTCTGAGTGAAGTTTATTCAATCAATTTAGGCCGCCATGACAAGA
AACCCGCTGGTGAAGCTTTCGCCCCCTGA

Upstream 100 bases:

>100_bases
ACGATTGCACGCTCGTCTCGCCTTTCGCGTGCAAGCCGGCGAAGCTGTGCGACCGCCCGGCTTCGTGCCTGAAGTTAAAT
TCGATGGTGCTGGGCCCGAA

Downstream 100 bases:

>100_bases
GTTCGACTGCGCTCAGTTAATGGTCGTAGGCGACGTGATGCTCGATTGGTATTGGCATGGTTCGACCTCCCGGATTTCGC
CGGAGGCGCCTGTTCCTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: ADP-heptose--LPS heptosyltransferase II [H]

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MKNERGQNLLKRVDLVVGGALLSLLGMFRRKRRPPAECTTAGIFAFAAIGDSILSSIIISELRKVRNISKVVVFASRSNA
RIYDLFDGLDEVVVVPLTSPLNALREIRKHDVDVLIDTSQWPRISAILAAFMKAKFTVGFKTRRQFRHYAYDACVEHRDD
IHELDNFRRLLRPLGIESTETPQIGKSIRPSGLPFVMDDRYIVFHPWASGTNFAMREWPAEYWQKFARMLIGSGYAIVIT
GGPEDAARAQQLVDLIGSSKVVSVAAKVSLAEVVGIVRRADCIVCVNTGIMHLSAMLDTPMISLHGPTNPFRWGPVSKER
GVLAVSRQDGGMFLNLGFEYPKDAKYVMDKISVASVADVLSEVYSINLGRHDKKPAGEAFAP

Sequences:

>Translated_382_residues
MKNERGQNLLKRVDLVVGGALLSLLGMFRRKRRPPAECTTAGIFAFAAIGDSILSSIIISELRKVRNISKVVVFASRSNA
RIYDLFDGLDEVVVVPLTSPLNALREIRKHDVDVLIDTSQWPRISAILAAFMKAKFTVGFKTRRQFRHYAYDACVEHRDD
IHELDNFRRLLRPLGIESTETPQIGKSIRPSGLPFVMDDRYIVFHPWASGTNFAMREWPAEYWQKFARMLIGSGYAIVIT
GGPEDAARAQQLVDLIGSSKVVSVAAKVSLAEVVGIVRRADCIVCVNTGIMHLSAMLDTPMISLHGPTNPFRWGPVSKER
GVLAVSRQDGGMFLNLGFEYPKDAKYVMDKISVASVADVLSEVYSINLGRHDKKPAGEAFAP
>Mature_382_residues
MKNERGQNLLKRVDLVVGGALLSLLGMFRRKRRPPAECTTAGIFAFAAIGDSILSSIIISELRKVRNISKVVVFASRSNA
RIYDLFDGLDEVVVVPLTSPLNALREIRKHDVDVLIDTSQWPRISAILAAFMKAKFTVGFKTRRQFRHYAYDACVEHRDD
IHELDNFRRLLRPLGIESTETPQIGKSIRPSGLPFVMDDRYIVFHPWASGTNFAMREWPAEYWQKFARMLIGSGYAIVIT
GGPEDAARAQQLVDLIGSSKVVSVAAKVSLAEVVGIVRRADCIVCVNTGIMHLSAMLDTPMISLHGPTNPFRWGPVSKER
GVLAVSRQDGGMFLNLGFEYPKDAKYVMDKISVASVADVLSEVYSINLGRHDKKPAGEAFAP

Specific function: Heptose Transfer To The Lipopolysaccharide Core. It Transfers The Innnermost Heptose To [4'-P](3-Deoxy-D-Manno- Octulosonic Acid)2-IVa. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790051, Length=264, Percent_Identity=26.5151515151515, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011910 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 42404; Mature: 42404

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNERGQNLLKRVDLVVGGALLSLLGMFRRKRRPPAECTTAGIFAFAAIGDSILSSIIIS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ELRKVRNISKVVVFASRSNARIYDLFDGLDEVVVVPLTSPLNALREIRKHDVDVLIDTSQ
HHHHHHCCCEEEEEEECCCCEEEHHHCCCCCEEEEECCCHHHHHHHHHHCCCEEEEECCC
WPRISAILAAFMKAKFTVGFKTRRQFRHYAYDACVEHRDDIHELDNFRRLLRPLGIESTE
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TPQIGKSIRPSGLPFVMDDRYIVFHPWASGTNFAMREWPAEYWQKFARMLIGSGYAIVIT
CCCCCCCCCCCCCCEEECCCEEEEECCCCCCCCHHHHCCHHHHHHHHHHHHCCCCEEEEE
GGPEDAARAQQLVDLIGSSKVVSVAAKVSLAEVVGIVRRADCIVCVNTGIMHLSAMLDTP
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHCCC
MISLHGPTNPFRWGPVSKERGVLAVSRQDGGMFLNLGFEYPKDAKYVMDKISVASVADVL
EEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
SEVYSINLGRHDKKPAGEAFAP
HHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKNERGQNLLKRVDLVVGGALLSLLGMFRRKRRPPAECTTAGIFAFAAIGDSILSSIIIS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ELRKVRNISKVVVFASRSNARIYDLFDGLDEVVVVPLTSPLNALREIRKHDVDVLIDTSQ
HHHHHHCCCEEEEEEECCCCEEEHHHCCCCCEEEEECCCHHHHHHHHHHCCCEEEEECCC
WPRISAILAAFMKAKFTVGFKTRRQFRHYAYDACVEHRDDIHELDNFRRLLRPLGIESTE
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TPQIGKSIRPSGLPFVMDDRYIVFHPWASGTNFAMREWPAEYWQKFARMLIGSGYAIVIT
CCCCCCCCCCCCCCEEECCCEEEEECCCCCCCCHHHHCCHHHHHHHHHHHHCCCCEEEEE
GGPEDAARAQQLVDLIGSSKVVSVAAKVSLAEVVGIVRRADCIVCVNTGIMHLSAMLDTP
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHCCC
MISLHGPTNPFRWGPVSKERGVLAVSRQDGGMFLNLGFEYPKDAKYVMDKISVASVADVL
EEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
SEVYSINLGRHDKKPAGEAFAP
HHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferases; Glycosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]