Click here to switch to the map view.

The map label for this gene is yfbE [C]

Identifier: 91782116

GI number: 91782116

Start: 827817

End: 828962

Strand: Reverse

Name: yfbE [C]

Synonym: Bxe_A3719

Alternate gene names: 91782116

Gene position: 828962-827817 (Counterclockwise)

Preceding gene: 91782117

Following gene: 91782103

Centisome position: 16.93

GC content: 57.77

Gene sequence:

>1146_bases
ATGAATGCTGTCGTACCGCTTAGGGCTATTGCGCCACAGATAGACGAGCGCATTTACGTTACCCAACCGCATCTTCCGCC
GCTCGAAGAATTCATTCCCTATCTTCAGCAGATCTGGGACAGTAAGGTGCTGACCAACGGCGGCCCGTTTCACCAGCAGT
TCGAAGCCGCGCTGTGCAAGTACCTCGGGGTCAAGCATCTCGCGCTCTTCACCAACGGCACGCTTGCGCTGCTTACCGCG
CTGCAGACGCTGCGCATCACCGGCGAGGTCATCACAACGCCTTATTCATTCGTTGCAACCGCGCACTCGCTGGTCTGGAA
CGGTATCAAGCCGGTATTCGTCGACATCGATCCGCGCACGCTGAATCTCGACCCTTCAAAAATCGAGGCCGCGATCACGC
CGCAGACCACCGCCATCATGCCGGTGCATTGCTACGGCAAGGCATGCGACGTCGAAGCGATTCAGAAGATCGCTGACAAC
TACAATCTGAAGGTAATTTACGACGCTGCCCATGCCTTCGGTGTGCAGACCGAAACCGGAAGCGTGCTCGAGCACGGCGA
CCTCTCCATCCTCAGCTTCCACGCCACCAAGGTCTTCAACACGTTTGAAGGCGGCGCGATCATCTGTCAGGACGAGAGAA
CGAAACAGCGGATCGACCATTTGAAGAACTTCGGTTTTGTCGATGAAGTGACTGTCGTTGCATGCGGCATCAACGGCAAG
ATGAGCGAGATCAACGCGGCATTCGGGTTGCTCCAGCTACAGCATATCGATGACGCACTGGCACGGCGCGCCCGGATCGA
CGCGATCTATAGGGAACGGCTGCGCGACGTGCGCGGAATTGCTTGCGTGGCGAAGGCGGGCGAAACAGTGGCGAATCACG
CGTACTTCCCGATTCTCGTCGGCCCGGACTACCCTCTCAGCCGCGACGCGCTGTACCAGAAGTTCCGCGATCGCGATATT
TACACGCGCCGCTATTTTTACCCACTGGTCTCGGAGTTTCCGATCTATCGCAGCCTGCCTTCCGCGCGGCCCGATAATCT
CCCGGTCGCCCACGCCGCTTCACAACAGATACTGTGTCTGCCGATTTTCCCGGCGCTGACGGATGACATGCTCGATCACA
TCATCGGGATCATCTCGGATATCTGA

Upstream 100 bases:

>100_bases
CTGGTGCGGCGATCAGCCGCCCCTCGCGTTTCAGGTAACCGCAGAAGAAGCCATTGCCGCCACGGCGACTCCACCACGCC
GTCCAGAATAGGGAAAAAAA

Downstream 100 bases:

>100_bases
ACCGAAATTGGCCGATCCGTCGTCCTGTCATATCGAAACATTGCCAGGACGACGGATCCCCATACGTGGCAGCCTGCCGA
TCAATGATCCGCGACTGACA

Product: putative transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MNAVVPLRAIAPQIDERIYVTQPHLPPLEEFIPYLQQIWDSKVLTNGGPFHQQFEAALCKYLGVKHLALFTNGTLALLTA
LQTLRITGEVITTPYSFVATAHSLVWNGIKPVFVDIDPRTLNLDPSKIEAAITPQTTAIMPVHCYGKACDVEAIQKIADN
YNLKVIYDAAHAFGVQTETGSVLEHGDLSILSFHATKVFNTFEGGAIICQDERTKQRIDHLKNFGFVDEVTVVACGINGK
MSEINAAFGLLQLQHIDDALARRARIDAIYRERLRDVRGIACVAKAGETVANHAYFPILVGPDYPLSRDALYQKFRDRDI
YTRRYFYPLVSEFPIYRSLPSARPDNLPVAHAASQQILCLPIFPALTDDMLDHIIGIISDI

Sequences:

>Translated_381_residues
MNAVVPLRAIAPQIDERIYVTQPHLPPLEEFIPYLQQIWDSKVLTNGGPFHQQFEAALCKYLGVKHLALFTNGTLALLTA
LQTLRITGEVITTPYSFVATAHSLVWNGIKPVFVDIDPRTLNLDPSKIEAAITPQTTAIMPVHCYGKACDVEAIQKIADN
YNLKVIYDAAHAFGVQTETGSVLEHGDLSILSFHATKVFNTFEGGAIICQDERTKQRIDHLKNFGFVDEVTVVACGINGK
MSEINAAFGLLQLQHIDDALARRARIDAIYRERLRDVRGIACVAKAGETVANHAYFPILVGPDYPLSRDALYQKFRDRDI
YTRRYFYPLVSEFPIYRSLPSARPDNLPVAHAASQQILCLPIFPALTDDMLDHIIGIISDI
>Mature_381_residues
MNAVVPLRAIAPQIDERIYVTQPHLPPLEEFIPYLQQIWDSKVLTNGGPFHQQFEAALCKYLGVKHLALFTNGTLALLTA
LQTLRITGEVITTPYSFVATAHSLVWNGIKPVFVDIDPRTLNLDPSKIEAAITPQTTAIMPVHCYGKACDVEAIQKIADN
YNLKVIYDAAHAFGVQTETGSVLEHGDLSILSFHATKVFNTFEGGAIICQDERTKQRIDHLKNFGFVDEVTVVACGINGK
MSEINAAFGLLQLQHIDDALARRARIDAIYRERLRDVRGIACVAKAGETVANHAYFPILVGPDYPLSRDALYQKFRDRDI
YTRRYFYPLVSEFPIYRSLPSARPDNLPVAHAASQQILCLPIFPALTDDMLDHIIGIISDI

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=377, Percent_Identity=30.2387267904509, Blast_Score=146, Evalue=2e-36,
Organism=Escherichia coli, GI2367285, Length=269, Percent_Identity=33.457249070632, Blast_Score=111, Evalue=6e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 42456; Mature: 42456

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVVPLRAIAPQIDERIYVTQPHLPPLEEFIPYLQQIWDSKVLTNGGPFHQQFEAALCK
CCCCCCHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHH
YLGVKHLALFTNGTLALLTALQTLRITGEVITTPYSFVATAHSLVWNGIKPVFVDIDPRT
HHCHHHEEEECCCHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCE
LNLDPSKIEAAITPQTTAIMPVHCYGKACDVEAIQKIADNYNLKVIYDAAHAFGVQTETG
ECCCHHHEEEEECCCCEEEEEEEECCCCCCHHHHHHHHCCCCEEEEEECHHHHCCCCCCC
SVLEHGDLSILSFHATKVFNTFEGGAIICQDERTKQRIDHLKNFGFVDEVTVVACGINGK
CCEECCCEEEEEEHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCCC
MSEINAAFGLLQLQHIDDALARRARIDAIYRERLRDVRGIACVAKAGETVANHAYFPILV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEE
GPDYPLSRDALYQKFRDRDIYTRRYFYPLVSEFPIYRSLPSARPDNLPVAHAASQQILCL
CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCEECCCCCCEEEE
PIFPALTDDMLDHIIGIISDI
ECCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNAVVPLRAIAPQIDERIYVTQPHLPPLEEFIPYLQQIWDSKVLTNGGPFHQQFEAALCK
CCCCCCHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHH
YLGVKHLALFTNGTLALLTALQTLRITGEVITTPYSFVATAHSLVWNGIKPVFVDIDPRT
HHCHHHEEEECCCHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCE
LNLDPSKIEAAITPQTTAIMPVHCYGKACDVEAIQKIADNYNLKVIYDAAHAFGVQTETG
ECCCHHHEEEEECCCCEEEEEEEECCCCCCHHHHHHHHCCCCEEEEEECHHHHCCCCCCC
SVLEHGDLSILSFHATKVFNTFEGGAIICQDERTKQRIDHLKNFGFVDEVTVVACGINGK
CCEECCCEEEEEEHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCCC
MSEINAAFGLLQLQHIDDALARRARIDAIYRERLRDVRGIACVAKAGETVANHAYFPILV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEE
GPDYPLSRDALYQKFRDRDIYTRRYFYPLVSEFPIYRSLPSARPDNLPVAHAASQQILCL
CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCEECCCCCCEEEE
PIFPALTDDMLDHIIGIISDI
ECCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]