Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is yibD [C]

Identifier: 91782112

GI number: 91782112

Start: 823953

End: 824954

Strand: Direct

Name: yibD [C]

Synonym: Bxe_A3723

Alternate gene names: 91782112

Gene position: 823953-824954 (Clockwise)

Preceding gene: 91782111

Following gene: 91782113

Centisome position: 16.83

GC content: 58.98

Gene sequence:

>1002_bases
ATGGGAGCTACCCTTAATTCACCGGTCCCGGAGCGAACTGCGCCGGTATTGTCGGTCATCGTGCTTTGTTACCGGCAGGA
CGAGTACGTCGGTGCATGTCTGCAAAGCGTCGTCGACCAGCATCTCGATGTGCCATTCGAGATCATCGTGGGCGATGACA
ATTCGCCCGACAATTCACTGGCTGTCATCGAGTCCTTCCGGGCGCGTTACCCGGACCTGATCAAGGTCGTTGCGCACGAC
ACCAACGTCGGCTGCGCAGCGAATTTCGCCGATACCGTGGCGATCGCGAAGGGCGAATTCATCGCGAACATCGACGGCGA
CGATGTCATGCTGCCCGGCAAGCTTCAGCGCCAGCTCGACTTCCTGAAAGCGCATCCCGAATGCGGCCTCGTGGTGCACA
GGATGCGCACGGTGGACCAGGATACTTTGGAGCCCGTGCTGTATCCGTTGCCGAAAAAAAAGCCCGCCACGTTCGACGCT
GCCTACCTCATCAGAAATGGACCGTACTTCTTTCACAGCTCCGAAATGTATCGGGCTCGCCTGCGCCGTCGCGGGCCCGT
CGACGTAGGTCTGAAAGCAGTCTGCGATCTGGCCCATCTGCTACAGGTCGTGGTCGGTACGCAAGGCTGCTACCTGGACG
AAGAGTTGGGTCTTTACCGCGTCAACCGGACCGGCATGACCTCCATGCGAATCAGGAATCCGGAGCGTCATAGGGAAAGC
ATGAACGACATGATCGAGACCTGTCTGATTGCGGCCAATCTGGGTGTGGAGAGTGATGCGGTCAACCGGGGCCGCGCGAG
GTTCTATCTGACCTCGGCCATCTTCTATCTGGAGCATGGGCGCGAGGACAGTTTCGAGGATTGCATCGAAGCGAGCCGGC
GTTCCGCACGAATCGGTATGAAGCAACTGGTTCTGTACTCCATGCGCCGGTGGCCGCGTGTGTTGTGCACTGTCTATACG
CGAGCCAAGCAGGTGGCGGGACGACAACGGATGAACGCATGA

Upstream 100 bases:

>100_bases
TGGCTCGCGATGGTTGCCTTGACCATCGCGGTATCGCCAATCATCCAACGAAAGGCTCGCCACCTGGCCGGGCGACTCGC
CTTCAACTGAGAGAAACAGC

Downstream 100 bases:

>100_bases
GTACAGCCATGCAGGAAAACGAGAGGCCCGTTACGACCGGAGTGAGGCTTCTCGACGTAATGAACCGGATCTTGCTGGCC
TGGTATCGGCTCAAGACCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MGATLNSPVPERTAPVLSVIVLCYRQDEYVGACLQSVVDQHLDVPFEIIVGDDNSPDNSLAVIESFRARYPDLIKVVAHD
TNVGCAANFADTVAIAKGEFIANIDGDDVMLPGKLQRQLDFLKAHPECGLVVHRMRTVDQDTLEPVLYPLPKKKPATFDA
AYLIRNGPYFFHSSEMYRARLRRRGPVDVGLKAVCDLAHLLQVVVGTQGCYLDEELGLYRVNRTGMTSMRIRNPERHRES
MNDMIETCLIAANLGVESDAVNRGRARFYLTSAIFYLEHGREDSFEDCIEASRRSARIGMKQLVLYSMRRWPRVLCTVYT
RAKQVAGRQRMNA

Sequences:

>Translated_333_residues
MGATLNSPVPERTAPVLSVIVLCYRQDEYVGACLQSVVDQHLDVPFEIIVGDDNSPDNSLAVIESFRARYPDLIKVVAHD
TNVGCAANFADTVAIAKGEFIANIDGDDVMLPGKLQRQLDFLKAHPECGLVVHRMRTVDQDTLEPVLYPLPKKKPATFDA
AYLIRNGPYFFHSSEMYRARLRRRGPVDVGLKAVCDLAHLLQVVVGTQGCYLDEELGLYRVNRTGMTSMRIRNPERHRES
MNDMIETCLIAANLGVESDAVNRGRARFYLTSAIFYLEHGREDSFEDCIEASRRSARIGMKQLVLYSMRRWPRVLCTVYT
RAKQVAGRQRMNA
>Mature_332_residues
GATLNSPVPERTAPVLSVIVLCYRQDEYVGACLQSVVDQHLDVPFEIIVGDDNSPDNSLAVIESFRARYPDLIKVVAHDT
NVGCAANFADTVAIAKGEFIANIDGDDVMLPGKLQRQLDFLKAHPECGLVVHRMRTVDQDTLEPVLYPLPKKKPATFDAA
YLIRNGPYFFHSSEMYRARLRRRGPVDVGLKAVCDLAHLLQVVVGTQGCYLDEELGLYRVNRTGMTSMRIRNPERHRESM
NDMIETCLIAANLGVESDAVNRGRARFYLTSAIFYLEHGREDSFEDCIEASRRSARIGMKQLVLYSMRRWPRVLCTVYTR
AKQVAGRQRMNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 37500; Mature: 37368

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGATLNSPVPERTAPVLSVIVLCYRQDEYVGACLQSVVDQHLDVPFEIIVGDDNSPDNSL
CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHH
AVIESFRARYPDLIKVVAHDTNVGCAANFADTVAIAKGEFIANIDGDDVMLPGKLQRQLD
HHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHEEECCCEEEECCCCCEECCHHHHHHHH
FLKAHPECGLVVHRMRTVDQDTLEPVLYPLPKKKPATFDAAYLIRNGPYFFHSSEMYRAR
HHHCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHEEEEECCCEEEECHHHHHHH
LRRRGPVDVGLKAVCDLAHLLQVVVGTQGCYLDEELGLYRVNRTGMTSMRIRNPERHRES
HHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCEEEECCCCCCCEEECCHHHHHHH
MNDMIETCLIAANLGVESDAVNRGRARFYLTSAIFYLEHGREDSFEDCIEASRRSARIGM
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
KQLVLYSMRRWPRVLCTVYTRAKQVAGRQRMNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GATLNSPVPERTAPVLSVIVLCYRQDEYVGACLQSVVDQHLDVPFEIIVGDDNSPDNSL
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHH
AVIESFRARYPDLIKVVAHDTNVGCAANFADTVAIAKGEFIANIDGDDVMLPGKLQRQLD
HHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHEEECCCEEEECCCCCEECCHHHHHHHH
FLKAHPECGLVVHRMRTVDQDTLEPVLYPLPKKKPATFDAAYLIRNGPYFFHSSEMYRAR
HHHCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHEEEEECCCEEEECHHHHHHH
LRRRGPVDVGLKAVCDLAHLLQVVVGTQGCYLDEELGLYRVNRTGMTSMRIRNPERHRES
HHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCEEEECCCCCCCEEECCHHHHHHH
MNDMIETCLIAANLGVESDAVNRGRARFYLTSAIFYLEHGREDSFEDCIEASRRSARIGM
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
KQLVLYSMRRWPRVLCTVYTRAKQVAGRQRMNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]