| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782098
Identifier: 91782098
GI number: 91782098
Start: 807017
End: 807370
Strand: Direct
Name: 91782098
Synonym: Bxe_A3737
Alternate gene names: NA
Gene position: 807017-807370 (Clockwise)
Preceding gene: 91782097
Following gene: 91782099
Centisome position: 16.48
GC content: 59.32
Gene sequence:
>354_bases ATGTTTCGCTTCGAAGCTGATTTGAAGGTGTTCCTGCACCGCGAGCCAATCGACTTCCGGGCAGGCATCAACAGTCTGGT GACGCTGGTCGAGCAATCCATGCAACTGGACCCGTTTGCGCGTGCCGTGTACGCCTTCCACAACCGCAGACGCAACCGGA TCAAGCTGCTACTTTACGAGCGCAACGGTTTCTGGCTGATGTTGCGGCGTCTGGAAGAAGATCACTTCATCTGGCCGCGT CGGCAACAGGCGGTGATCGAACTGACGACCGAGCAGCTACGCTGGCTGCTCGAGGGTATCGACATCGAGGCAATGTGCCG TCATCCGGCGCGGCGGTACCGCCACGCCAGCTAA
Upstream 100 bases:
>100_bases TGTCGGCCCAGTTGCCCAATGGCGTAAAGCTTGAGCTCGAATGCTCGGAACGCGACGCCGCGCTCGTGAGCGCCATGATC GCGGCACTGGGACGGCGCTG
Downstream 100 bases:
>100_bases TGACCGGCCTGCCGGCCAGCAACGCGCGCGAGGGACTGTTACAAATCTCCGTAAACCTGTAGCGCGCGGCATTCGACTAT CCTGGGAGCATGAATGAAGA
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MFRFEADLKVFLHREPIDFRAGINSLVTLVEQSMQLDPFARAVYAFHNRRRNRIKLLLYERNGFWLMLRRLEEDHFIWPR RQQAVIELTTEQLRWLLEGIDIEAMCRHPARRYRHAS
Sequences:
>Translated_117_residues MFRFEADLKVFLHREPIDFRAGINSLVTLVEQSMQLDPFARAVYAFHNRRRNRIKLLLYERNGFWLMLRRLEEDHFIWPR RQQAVIELTTEQLRWLLEGIDIEAMCRHPARRYRHAS >Mature_117_residues MFRFEADLKVFLHREPIDFRAGINSLVTLVEQSMQLDPFARAVYAFHNRRRNRIKLLLYERNGFWLMLRRLEEDHFIWPR RQQAVIELTTEQLRWLLEGIDIEAMCRHPARRYRHAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 34 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008878 [H]
Pfam domain/function: PF05717 Transposase_34 [H]
EC number: NA
Molecular weight: Translated: 14338; Mature: 14338
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRFEADLKVFLHREPIDFRAGINSLVTLVEQSMQLDPFARAVYAFHNRRRNRIKLLLYE CCEECCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEE RNGFWLMLRRLEEDHFIWPRRQQAVIELTTEQLRWLLEGIDIEAMCRHPARRYRHAS CCCEEEEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHCCCCC >Mature Secondary Structure MFRFEADLKVFLHREPIDFRAGINSLVTLVEQSMQLDPFARAVYAFHNRRRNRIKLLLYE CCEECCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEE RNGFWLMLRRLEEDHFIWPRRQQAVIELTTEQLRWLLEGIDIEAMCRHPARRYRHAS CCCEEEEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]