Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is 91782095

Identifier: 91782095

GI number: 91782095

Start: 804171

End: 805709

Strand: Direct

Name: 91782095

Synonym: Bxe_A3740

Alternate gene names: NA

Gene position: 804171-805709 (Clockwise)

Preceding gene: 91782094

Following gene: 91782096

Centisome position: 16.43

GC content: 58.74

Gene sequence:

>1539_bases
ATGGCATTTCCAAAGTTGACCATGCGTAAAATTCGAGAAGCGCTGCGCCTACATTTCGATTGCGGCTTCAATCATCGGGA
AGTTGCTCGCGCGCTGGGCACTTCGCCCACGACCGTTGGGCAATATGTTCGCCGTCTGGAGCGTGCCGGCTTAAGCTACC
CGCTGCCGTCAGCGCTCGGTGACGTCGAACTCGAGGCACGCCTGTTTCCGCCACCGCCGCGCGTGGAAGGAGAGCGTCCT
GCGCCGCACTGGCCGACTGTGAGGCGCGAGCTCGCCCGCAAAGGCGTGACGCTCGATCTGCTCTGGAACGAGTACAAGGC
CGAGCACCCCGACGGTTACGCGTACACCTGGTTTTGCACACGATACAGCGAATGGGCGAATTCGCTCCCGCTAACCTTGC
GGCAAACACATGCTCCGGGCGAGAAGCTGTTCGTCGACTACTCGGGCGACAAGGTTGCGATCATCAATGCGGAAACGGGT
GAGAATCGGGAGGCCGAGTTGTTCGTGGCCGTATTGGGGGCGTCGAACTACACCTATGCGGAAGCAACTTGGACCCAGCA
GAGTTCTGATTGGATCGGCTCTCACATTCGAACCTTCGAATTTATGGGCGGTTGTCCTGAGATCGTCACGCCCGACAACC
TTAAATCGGGCGTGCACAAGCCGAGCTTCTACGATCCCATTATCAATCGGACATACGGAGAAATGGCCTCGCATTATTCT
GTGGCAGTCATCCCAGCCCGCAGTAAAAAGCCCCGTGATAAAGCTAAGGTTGAGCAAGGCGTGCTCCTTGTCCAGCGCTA
CATTCTCGCTCGACTTCGCAAACACCGCTTCTTCAGCCTGACCGAGGCAAACTCCGCGATCGCGACACTCCTGGTCGACT
TGAACAACAAAGCCTTCAAGAAGCTGCCGGGATCTCGCCGCAGCACTTTCGATGAATTCGAGCGCTCATCGCTGAAAGCG
CTTCCGTCACAGCGCTATCAATATGCTGATTGGAAGGTAGCGCGCGTGGGGCCTGATTACCACGTCGACATTGACGTTCA
CTACTACTCTGTACCGCACCGCTTCGCGCGTCAACAGGTCGACGTTCGATATACGAACGGGACAGTCGAGATCTTCCACC
AAGGCACGCGTATCGCCGCTCACGTGCGAAGCAGTCGGCGCGGTCACCATAGTACGGTTAATGCGCACATGCCGCCTCAT
CATCAAGAGGTCAGTGGGTGGGGGCCGCAGCGTCTGTACGACTGGGCCATACGCATCGGGCCGCACACCGCCGCCGTGAT
CCAGCACCTGCTTGGCGGCCGGCAGCATCCCCAACAAGCCTATCGCGCTTGCCTTGGCGTCCTTCGCCTGGGCAAAGACC
ACGGCAATGCACGGCTGGAGGCCGCGTGCTGCCGTGCCATCGATCTGAAGGCGCCAAGCTACCGCTTCATTAGCTCGACG
CTCAAGAACGGCCTGGACCAGTCGCCTCAGACAAAAACGGATCAGGCCAGCTTACCGCTCACACATCCCAATGTGCGCGG
ACCGGACTACTATCATTGA

Upstream 100 bases:

>100_bases
CAAGCTGGACAGCGATTTCGCGTCAAGCTGGACAGTAAGTTCGTAAAATAGCGACGCAGGTCAACCGGGGCACCCTCGAT
GATTTCGTCGGGGCGTCTAC

Downstream 100 bases:

>100_bases
AGAGGCCATATGCTCAAACATCCAACGATCGACAAGCTTCACGCGCTGAGGCTGAGCGGCATGGCATCCGCCTTGACGCA
ACAGCAGAACAATCCTGATA

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MAFPKLTMRKIREALRLHFDCGFNHREVARALGTSPTTVGQYVRRLERAGLSYPLPSALGDVELEARLFPPPPRVEGERP
APHWPTVRRELARKGVTLDLLWNEYKAEHPDGYAYTWFCTRYSEWANSLPLTLRQTHAPGEKLFVDYSGDKVAIINAETG
ENREAELFVAVLGASNYTYAEATWTQQSSDWIGSHIRTFEFMGGCPEIVTPDNLKSGVHKPSFYDPIINRTYGEMASHYS
VAVIPARSKKPRDKAKVEQGVLLVQRYILARLRKHRFFSLTEANSAIATLLVDLNNKAFKKLPGSRRSTFDEFERSSLKA
LPSQRYQYADWKVARVGPDYHVDIDVHYYSVPHRFARQQVDVRYTNGTVEIFHQGTRIAAHVRSSRRGHHSTVNAHMPPH
HQEVSGWGPQRLYDWAIRIGPHTAAVIQHLLGGRQHPQQAYRACLGVLRLGKDHGNARLEAACCRAIDLKAPSYRFISST
LKNGLDQSPQTKTDQASLPLTHPNVRGPDYYH

Sequences:

>Translated_512_residues
MAFPKLTMRKIREALRLHFDCGFNHREVARALGTSPTTVGQYVRRLERAGLSYPLPSALGDVELEARLFPPPPRVEGERP
APHWPTVRRELARKGVTLDLLWNEYKAEHPDGYAYTWFCTRYSEWANSLPLTLRQTHAPGEKLFVDYSGDKVAIINAETG
ENREAELFVAVLGASNYTYAEATWTQQSSDWIGSHIRTFEFMGGCPEIVTPDNLKSGVHKPSFYDPIINRTYGEMASHYS
VAVIPARSKKPRDKAKVEQGVLLVQRYILARLRKHRFFSLTEANSAIATLLVDLNNKAFKKLPGSRRSTFDEFERSSLKA
LPSQRYQYADWKVARVGPDYHVDIDVHYYSVPHRFARQQVDVRYTNGTVEIFHQGTRIAAHVRSSRRGHHSTVNAHMPPH
HQEVSGWGPQRLYDWAIRIGPHTAAVIQHLLGGRQHPQQAYRACLGVLRLGKDHGNARLEAACCRAIDLKAPSYRFISST
LKNGLDQSPQTKTDQASLPLTHPNVRGPDYYH
>Mature_511_residues
AFPKLTMRKIREALRLHFDCGFNHREVARALGTSPTTVGQYVRRLERAGLSYPLPSALGDVELEARLFPPPPRVEGERPA
PHWPTVRRELARKGVTLDLLWNEYKAEHPDGYAYTWFCTRYSEWANSLPLTLRQTHAPGEKLFVDYSGDKVAIINAETGE
NREAELFVAVLGASNYTYAEATWTQQSSDWIGSHIRTFEFMGGCPEIVTPDNLKSGVHKPSFYDPIINRTYGEMASHYSV
AVIPARSKKPRDKAKVEQGVLLVQRYILARLRKHRFFSLTEANSAIATLLVDLNNKAFKKLPGSRRSTFDEFERSSLKAL
PSQRYQYADWKVARVGPDYHVDIDVHYYSVPHRFARQQVDVRYTNGTVEIFHQGTRIAAHVRSSRRGHHSTVNAHMPPHH
QEVSGWGPQRLYDWAIRIGPHTAAVIQHLLGGRQHPQQAYRACLGVLRLGKDHGNARLEAACCRAIDLKAPSYRFISSTL
KNGLDQSPQTKTDQASLPLTHPNVRGPDYYH

Specific function: Unknown

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017895
- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 58133; Mature: 58002

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFPKLTMRKIREALRLHFDCGFNHREVARALGTSPTTVGQYVRRLERAGLSYPLPSALG
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHCC
DVELEARLFPPPPRVEGERPAPHWPTVRRELARKGVTLDLLWNEYKAEHPDGYAYTWFCT
CCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECHHCCCCCCCCEEEEEEC
RYSEWANSLPLTLRQTHAPGEKLFVDYSGDKVAIINAETGENREAELFVAVLGASNYTYA
CHHHHHCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCEEEEEEECCCCCEEE
EATWTQQSSDWIGSHIRTFEFMGGCPEIVTPDNLKSGVHKPSFYDPIINRTYGEMASHYS
EEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCE
VAVIPARSKKPRDKAKVEQGVLLVQRYILARLRKHRFFSLTEANSAIATLLVDLNNKAFK
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEEEECCCHHHH
KLPGSRRSTFDEFERSSLKALPSQRYQYADWKVARVGPDYHVDIDVHYYSVPHRFARQQV
HCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEEEEECCCHHHHHCCE
DVRYTNGTVEIFHQGTRIAAHVRSSRRGHHSTVNAHMPPHHQEVSGWGPQRLYDWAIRIG
EEEEECCEEEEEECCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHEEHEEEC
PHTAAVIQHLLGGRQHPQQAYRACLGVLRLGKDHGNARLEAACCRAIDLKAPSYRFISST
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH
LKNGLDQSPQTKTDQASLPLTHPNVRGPDYYH
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AFPKLTMRKIREALRLHFDCGFNHREVARALGTSPTTVGQYVRRLERAGLSYPLPSALG
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHCC
DVELEARLFPPPPRVEGERPAPHWPTVRRELARKGVTLDLLWNEYKAEHPDGYAYTWFCT
CCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECHHCCCCCCCCEEEEEEC
RYSEWANSLPLTLRQTHAPGEKLFVDYSGDKVAIINAETGENREAELFVAVLGASNYTYA
CHHHHHCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCEEEEEEECCCCCEEE
EATWTQQSSDWIGSHIRTFEFMGGCPEIVTPDNLKSGVHKPSFYDPIINRTYGEMASHYS
EEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCE
VAVIPARSKKPRDKAKVEQGVLLVQRYILARLRKHRFFSLTEANSAIATLLVDLNNKAFK
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEEEECCCHHHH
KLPGSRRSTFDEFERSSLKALPSQRYQYADWKVARVGPDYHVDIDVHYYSVPHRFARQQV
HCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEEEEECCCHHHHHCCE
DVRYTNGTVEIFHQGTRIAAHVRSSRRGHHSTVNAHMPPHHQEVSGWGPQRLYDWAIRIG
EEEEECCEEEEEECCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHEEHEEEC
PHTAAVIQHLLGGRQHPQQAYRACLGVLRLGKDHGNARLEAACCRAIDLKAPSYRFISST
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH
LKNGLDQSPQTKTDQASLPLTHPNVRGPDYYH
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]