| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782095
Identifier: 91782095
GI number: 91782095
Start: 804171
End: 805709
Strand: Direct
Name: 91782095
Synonym: Bxe_A3740
Alternate gene names: NA
Gene position: 804171-805709 (Clockwise)
Preceding gene: 91782094
Following gene: 91782096
Centisome position: 16.43
GC content: 58.74
Gene sequence:
>1539_bases ATGGCATTTCCAAAGTTGACCATGCGTAAAATTCGAGAAGCGCTGCGCCTACATTTCGATTGCGGCTTCAATCATCGGGA AGTTGCTCGCGCGCTGGGCACTTCGCCCACGACCGTTGGGCAATATGTTCGCCGTCTGGAGCGTGCCGGCTTAAGCTACC CGCTGCCGTCAGCGCTCGGTGACGTCGAACTCGAGGCACGCCTGTTTCCGCCACCGCCGCGCGTGGAAGGAGAGCGTCCT GCGCCGCACTGGCCGACTGTGAGGCGCGAGCTCGCCCGCAAAGGCGTGACGCTCGATCTGCTCTGGAACGAGTACAAGGC CGAGCACCCCGACGGTTACGCGTACACCTGGTTTTGCACACGATACAGCGAATGGGCGAATTCGCTCCCGCTAACCTTGC GGCAAACACATGCTCCGGGCGAGAAGCTGTTCGTCGACTACTCGGGCGACAAGGTTGCGATCATCAATGCGGAAACGGGT GAGAATCGGGAGGCCGAGTTGTTCGTGGCCGTATTGGGGGCGTCGAACTACACCTATGCGGAAGCAACTTGGACCCAGCA GAGTTCTGATTGGATCGGCTCTCACATTCGAACCTTCGAATTTATGGGCGGTTGTCCTGAGATCGTCACGCCCGACAACC TTAAATCGGGCGTGCACAAGCCGAGCTTCTACGATCCCATTATCAATCGGACATACGGAGAAATGGCCTCGCATTATTCT GTGGCAGTCATCCCAGCCCGCAGTAAAAAGCCCCGTGATAAAGCTAAGGTTGAGCAAGGCGTGCTCCTTGTCCAGCGCTA CATTCTCGCTCGACTTCGCAAACACCGCTTCTTCAGCCTGACCGAGGCAAACTCCGCGATCGCGACACTCCTGGTCGACT TGAACAACAAAGCCTTCAAGAAGCTGCCGGGATCTCGCCGCAGCACTTTCGATGAATTCGAGCGCTCATCGCTGAAAGCG CTTCCGTCACAGCGCTATCAATATGCTGATTGGAAGGTAGCGCGCGTGGGGCCTGATTACCACGTCGACATTGACGTTCA CTACTACTCTGTACCGCACCGCTTCGCGCGTCAACAGGTCGACGTTCGATATACGAACGGGACAGTCGAGATCTTCCACC AAGGCACGCGTATCGCCGCTCACGTGCGAAGCAGTCGGCGCGGTCACCATAGTACGGTTAATGCGCACATGCCGCCTCAT CATCAAGAGGTCAGTGGGTGGGGGCCGCAGCGTCTGTACGACTGGGCCATACGCATCGGGCCGCACACCGCCGCCGTGAT CCAGCACCTGCTTGGCGGCCGGCAGCATCCCCAACAAGCCTATCGCGCTTGCCTTGGCGTCCTTCGCCTGGGCAAAGACC ACGGCAATGCACGGCTGGAGGCCGCGTGCTGCCGTGCCATCGATCTGAAGGCGCCAAGCTACCGCTTCATTAGCTCGACG CTCAAGAACGGCCTGGACCAGTCGCCTCAGACAAAAACGGATCAGGCCAGCTTACCGCTCACACATCCCAATGTGCGCGG ACCGGACTACTATCATTGA
Upstream 100 bases:
>100_bases CAAGCTGGACAGCGATTTCGCGTCAAGCTGGACAGTAAGTTCGTAAAATAGCGACGCAGGTCAACCGGGGCACCCTCGAT GATTTCGTCGGGGCGTCTAC
Downstream 100 bases:
>100_bases AGAGGCCATATGCTCAAACATCCAACGATCGACAAGCTTCACGCGCTGAGGCTGAGCGGCATGGCATCCGCCTTGACGCA ACAGCAGAACAATCCTGATA
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MAFPKLTMRKIREALRLHFDCGFNHREVARALGTSPTTVGQYVRRLERAGLSYPLPSALGDVELEARLFPPPPRVEGERP APHWPTVRRELARKGVTLDLLWNEYKAEHPDGYAYTWFCTRYSEWANSLPLTLRQTHAPGEKLFVDYSGDKVAIINAETG ENREAELFVAVLGASNYTYAEATWTQQSSDWIGSHIRTFEFMGGCPEIVTPDNLKSGVHKPSFYDPIINRTYGEMASHYS VAVIPARSKKPRDKAKVEQGVLLVQRYILARLRKHRFFSLTEANSAIATLLVDLNNKAFKKLPGSRRSTFDEFERSSLKA LPSQRYQYADWKVARVGPDYHVDIDVHYYSVPHRFARQQVDVRYTNGTVEIFHQGTRIAAHVRSSRRGHHSTVNAHMPPH HQEVSGWGPQRLYDWAIRIGPHTAAVIQHLLGGRQHPQQAYRACLGVLRLGKDHGNARLEAACCRAIDLKAPSYRFISST LKNGLDQSPQTKTDQASLPLTHPNVRGPDYYH
Sequences:
>Translated_512_residues MAFPKLTMRKIREALRLHFDCGFNHREVARALGTSPTTVGQYVRRLERAGLSYPLPSALGDVELEARLFPPPPRVEGERP APHWPTVRRELARKGVTLDLLWNEYKAEHPDGYAYTWFCTRYSEWANSLPLTLRQTHAPGEKLFVDYSGDKVAIINAETG ENREAELFVAVLGASNYTYAEATWTQQSSDWIGSHIRTFEFMGGCPEIVTPDNLKSGVHKPSFYDPIINRTYGEMASHYS VAVIPARSKKPRDKAKVEQGVLLVQRYILARLRKHRFFSLTEANSAIATLLVDLNNKAFKKLPGSRRSTFDEFERSSLKA LPSQRYQYADWKVARVGPDYHVDIDVHYYSVPHRFARQQVDVRYTNGTVEIFHQGTRIAAHVRSSRRGHHSTVNAHMPPH HQEVSGWGPQRLYDWAIRIGPHTAAVIQHLLGGRQHPQQAYRACLGVLRLGKDHGNARLEAACCRAIDLKAPSYRFISST LKNGLDQSPQTKTDQASLPLTHPNVRGPDYYH >Mature_511_residues AFPKLTMRKIREALRLHFDCGFNHREVARALGTSPTTVGQYVRRLERAGLSYPLPSALGDVELEARLFPPPPRVEGERPA PHWPTVRRELARKGVTLDLLWNEYKAEHPDGYAYTWFCTRYSEWANSLPLTLRQTHAPGEKLFVDYSGDKVAIINAETGE NREAELFVAVLGASNYTYAEATWTQQSSDWIGSHIRTFEFMGGCPEIVTPDNLKSGVHKPSFYDPIINRTYGEMASHYSV AVIPARSKKPRDKAKVEQGVLLVQRYILARLRKHRFFSLTEANSAIATLLVDLNNKAFKKLPGSRRSTFDEFERSSLKAL PSQRYQYADWKVARVGPDYHVDIDVHYYSVPHRFARQQVDVRYTNGTVEIFHQGTRIAAHVRSSRRGHHSTVNAHMPPHH QEVSGWGPQRLYDWAIRIGPHTAAVIQHLLGGRQHPQQAYRACLGVLRLGKDHGNARLEAACCRAIDLKAPSYRFISSTL KNGLDQSPQTKTDQASLPLTHPNVRGPDYYH
Specific function: Unknown
COG id: COG4584
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017895 - InterPro: IPR001584 - InterPro: IPR012337 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 58133; Mature: 58002
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFPKLTMRKIREALRLHFDCGFNHREVARALGTSPTTVGQYVRRLERAGLSYPLPSALG CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHCC DVELEARLFPPPPRVEGERPAPHWPTVRRELARKGVTLDLLWNEYKAEHPDGYAYTWFCT CCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECHHCCCCCCCCEEEEEEC RYSEWANSLPLTLRQTHAPGEKLFVDYSGDKVAIINAETGENREAELFVAVLGASNYTYA CHHHHHCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCEEEEEEECCCCCEEE EATWTQQSSDWIGSHIRTFEFMGGCPEIVTPDNLKSGVHKPSFYDPIINRTYGEMASHYS EEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCE VAVIPARSKKPRDKAKVEQGVLLVQRYILARLRKHRFFSLTEANSAIATLLVDLNNKAFK EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEEEECCCHHHH KLPGSRRSTFDEFERSSLKALPSQRYQYADWKVARVGPDYHVDIDVHYYSVPHRFARQQV HCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEEEEECCCHHHHHCCE DVRYTNGTVEIFHQGTRIAAHVRSSRRGHHSTVNAHMPPHHQEVSGWGPQRLYDWAIRIG EEEEECCEEEEEECCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHEEHEEEC PHTAAVIQHLLGGRQHPQQAYRACLGVLRLGKDHGNARLEAACCRAIDLKAPSYRFISST CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH LKNGLDQSPQTKTDQASLPLTHPNVRGPDYYH HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AFPKLTMRKIREALRLHFDCGFNHREVARALGTSPTTVGQYVRRLERAGLSYPLPSALG CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHCC DVELEARLFPPPPRVEGERPAPHWPTVRRELARKGVTLDLLWNEYKAEHPDGYAYTWFCT CCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECHHCCCCCCCCEEEEEEC RYSEWANSLPLTLRQTHAPGEKLFVDYSGDKVAIINAETGENREAELFVAVLGASNYTYA CHHHHHCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCCEEEEEEECCCCCEEE EATWTQQSSDWIGSHIRTFEFMGGCPEIVTPDNLKSGVHKPSFYDPIINRTYGEMASHYS EEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCE VAVIPARSKKPRDKAKVEQGVLLVQRYILARLRKHRFFSLTEANSAIATLLVDLNNKAFK EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEEEECCCHHHH KLPGSRRSTFDEFERSSLKALPSQRYQYADWKVARVGPDYHVDIDVHYYSVPHRFARQQV HCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEEEEECCCHHHHHCCE DVRYTNGTVEIFHQGTRIAAHVRSSRRGHHSTVNAHMPPHHQEVSGWGPQRLYDWAIRIG EEEEECCEEEEEECCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHEEHEEEC PHTAAVIQHLLGGRQHPQQAYRACLGVLRLGKDHGNARLEAACCRAIDLKAPSYRFISST CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH LKNGLDQSPQTKTDQASLPLTHPNVRGPDYYH HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8796346; 9163424 [H]