| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is insH10 [H]
Identifier: 91782083
GI number: 91782083
Start: 793108
End: 793575
Strand: Direct
Name: insH10 [H]
Synonym: Bxe_A3753
Alternate gene names: 91782083
Gene position: 793108-793575 (Clockwise)
Preceding gene: 91782080
Following gene: 91782084
Centisome position: 16.2
GC content: 59.19
Gene sequence:
>468_bases ATGACGCGTTTGCCGGACGAGGGCACGATTCTCCGGTTTCGCCACCTGCTCGAAACGCTCGGCCTGGCTGCGCAGATGCT CACGCTGGTCAATGAGATCTTGAGCGAGCAAGGCTTGATGCTTAAAACACGGTCGGCTGTCGACGCTACCTCGATCTCTG CACCCAGCTCTGCGAAGAACGGCTCTGGTACACGAGACCCGGAAATACACCAGACGAAGAAGGGAAATCAGTGGTACTTC GGGATGAAAGCGCATGTCGGCGTGGATGCAGACTCGGGGCTGGTGCACGCCGTCGTCGGTACTGCGGCCAACGTTCACGA CATCAACGCGGCCGAAGCGTTGTTGCACGGCAGGAAATGGATGTGTACGCTGACGCCGGATATCAGGGTATCGAAACGCA CTGCAAGGCAAAGGCGGTTCGCTGGCATGTCGCGATGCGGCCAGGCAGGCGTAGACAACTGGACCTGA
Upstream 100 bases:
>100_bases CAGCAGTGGTTTGGTCTGTCAGACCCGGCGATGGCCGGCGATGGAAGAGGCGCTTTATGACGCATCACTGTATCGTGAGT TTGCGGGGCTAGACGGCGGG
Downstream 100 bases:
>100_bases ACGATCGCCCGGACGCGATTCGTTCAGATTGAACGTCTGAAGGTCGGCGTCCGCGCCAAGGTCGAACATCCGTTCCGAGT CCTCAAGCAGCAGTTTGGCT
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MTRLPDEGTILRFRHLLETLGLAAQMLTLVNEILSEQGLMLKTRSAVDATSISAPSSAKNGSGTRDPEIHQTKKGNQWYF GMKAHVGVDADSGLVHAVVGTAANVHDINAAEALLHGRKWMCTLTPDIRVSKRTARQRRFAGMSRCGQAGVDNWT
Sequences:
>Translated_155_residues MTRLPDEGTILRFRHLLETLGLAAQMLTLVNEILSEQGLMLKTRSAVDATSISAPSSAKNGSGTRDPEIHQTKKGNQWYF GMKAHVGVDADSGLVHAVVGTAANVHDINAAEALLHGRKWMCTLTPDIRVSKRTARQRRFAGMSRCGQAGVDNWT >Mature_154_residues TRLPDEGTILRFRHLLETLGLAAQMLTLVNEILSEQGLMLKTRSAVDATSISAPSSAKNGSGTRDPEIHQTKKGNQWYFG MKAHVGVDADSGLVHAVVGTAANVHDINAAEALLHGRKWMCTLTPDIRVSKRTARQRRFAGMSRCGQAGVDNWT
Specific function: Involved in the transposition of the insertion sequence IS5 [H]
COG id: COG3039
COG function: function code L; Transposase and inactivated derivatives, IS5 family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
Organism=Escherichia coli, GI1787634, Length=120, Percent_Identity=57.5, Blast_Score=145, Evalue=9e-37, Organism=Escherichia coli, GI1789921, Length=116, Percent_Identity=59.4827586206897, Blast_Score=145, Evalue=1e-36, Organism=Escherichia coli, GI1789612, Length=116, Percent_Identity=59.4827586206897, Blast_Score=145, Evalue=1e-36, Organism=Escherichia coli, GI1789355, Length=116, Percent_Identity=59.4827586206897, Blast_Score=145, Evalue=1e-36, Organism=Escherichia coli, GI1788518, Length=116, Percent_Identity=59.4827586206897, Blast_Score=145, Evalue=1e-36, Organism=Escherichia coli, GI1788342, Length=116, Percent_Identity=59.4827586206897, Blast_Score=145, Evalue=1e-36, Organism=Escherichia coli, GI1787592, Length=116, Percent_Identity=59.4827586206897, Blast_Score=145, Evalue=1e-36, Organism=Escherichia coli, GI1786877, Length=116, Percent_Identity=59.4827586206897, Blast_Score=145, Evalue=1e-36, Organism=Escherichia coli, GI1786764, Length=116, Percent_Identity=59.4827586206897, Blast_Score=145, Evalue=1e-36, Organism=Escherichia coli, GI1786453, Length=116, Percent_Identity=59.4827586206897, Blast_Score=145, Evalue=1e-36, Organism=Escherichia coli, GI1788303, Length=116, Percent_Identity=59.4827586206897, Blast_Score=145, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 - InterPro: IPR008490 [H]
Pfam domain/function: PF05598 DUF772; PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 16867; Mature: 16735
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLPDEGTILRFRHLLETLGLAAQMLTLVNEILSEQGLMLKTRSAVDATSISAPSSAKN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHCCCCCCCCCC GSGTRDPEIHQTKKGNQWYFGMKAHVGVDADSGLVHAVVGTAANVHDINAAEALLHGRKW CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHCCCCCCCCHHHHHHHCCCCE MCTLTPDIRVSKRTARQRRFAGMSRCGQAGVDNWT EEEECCCCEEHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TRLPDEGTILRFRHLLETLGLAAQMLTLVNEILSEQGLMLKTRSAVDATSISAPSSAKN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHCCCCCCCCCC GSGTRDPEIHQTKKGNQWYFGMKAHVGVDADSGLVHAVVGTAANVHDINAAEALLHGRKW CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHCCCCCCCCHHHHHHHCCCCE MCTLTPDIRVSKRTARQRRFAGMSRCGQAGVDNWT EEEECCCCEEHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9097039; 9097040; 9278503 [H]