Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

Click here to switch to the map view.

The map label for this gene is 91782054

Identifier: 91782054

GI number: 91782054

Start: 761173

End: 761598

Strand: Reverse

Name: 91782054

Synonym: Bxe_A3790

Alternate gene names: NA

Gene position: 761598-761173 (Counterclockwise)

Preceding gene: 91782055

Following gene: 91782051

Centisome position: 15.56

GC content: 56.57

Gene sequence:

>426_bases
ATGACGCGCGCTCACACGGTCGTCAAACGTGCATTCGTCTCGAAGAGCTTCCTGCTGTTTCTGTTGGCCGGCGGCTTCGC
CGCCGCGGTCAACTGGTGCAGCCGGATGGTCTACAATCTGTGGATGCCGTACTCGGCCGCGATCGTGGTCGCCTATATCA
CTGGGATGATTACGGCGTTCGTGCTCGCGAAGCTGTTTGTATTTACGGAGAGTACACAATCGACAGGGCGGTCAGTGTTC
TTCTTTACTCTCGTGAATCTGGTTGCCGTCGTACAAACGTGGGCAGTCAGCGTTGGACTGGCTTACTACGTGTTCCCTCG
GACGGGGATGACTTGGCATGCGCGAGATGTTGCGCATGCGGTCGGAGTCGCTGTGCCGGTCTTTACGAGTTATGTGGGGC
ATAAGCGGTGGAGTTTTAAGCACTGA

Upstream 100 bases:

>100_bases
CTGTAAAGGGCTTGCTCGTGGCGGACACCTCCTACTACTATCCCGAAGATCGTGGCATCTCGGAGAGTATCGGACTGTCC
CGCAAGATGGCAAAGATGAT

Downstream 100 bases:

>100_bases
GCTGGCAACAGGCTGCGCATACTAGCGGCCAAGCCTTCGCGGCACGATCTTGTCGTGCCGCGCCAAAATTACTTCGCAAA
TATCACCCGCTGTCTGATTC

Product: hypothetical protein

Products: NA

Alternate protein names: GtrA-Like Protein

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MTRAHTVVKRAFVSKSFLLFLLAGGFAAAVNWCSRMVYNLWMPYSAAIVVAYITGMITAFVLAKLFVFTESTQSTGRSVF
FFTLVNLVAVVQTWAVSVGLAYYVFPRTGMTWHARDVAHAVGVAVPVFTSYVGHKRWSFKH

Sequences:

>Translated_141_residues
MTRAHTVVKRAFVSKSFLLFLLAGGFAAAVNWCSRMVYNLWMPYSAAIVVAYITGMITAFVLAKLFVFTESTQSTGRSVF
FFTLVNLVAVVQTWAVSVGLAYYVFPRTGMTWHARDVAHAVGVAVPVFTSYVGHKRWSFKH
>Mature_140_residues
TRAHTVVKRAFVSKSFLLFLLAGGFAAAVNWCSRMVYNLWMPYSAAIVVAYITGMITAFVLAKLFVFTESTQSTGRSVFF
FTLVNLVAVVQTWAVSVGLAYYVFPRTGMTWHARDVAHAVGVAVPVFTSYVGHKRWSFKH

Specific function: Unknown

COG id: COG2246

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15726; Mature: 15594

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRAHTVVKRAFVSKSFLLFLLAGGFAAAVNWCSRMVYNLWMPYSAAIVVAYITGMITAF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VLAKLFVFTESTQSTGRSVFFFTLVNLVAVVQTWAVSVGLAYYVFPRTGMTWHARDVAHA
HHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHH
VGVAVPVFTSYVGHKRWSFKH
HHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TRAHTVVKRAFVSKSFLLFLLAGGFAAAVNWCSRMVYNLWMPYSAAIVVAYITGMITAF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VLAKLFVFTESTQSTGRSVFFFTLVNLVAVVQTWAVSVGLAYYVFPRTGMTWHARDVAHA
HHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHH
VGVAVPVFTSYVGHKRWSFKH
HHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA