| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is groEL [H]
Identifier: 91782029
GI number: 91782029
Start: 729263
End: 730903
Strand: Direct
Name: groEL [H]
Synonym: Bxe_A3815
Alternate gene names: 91782029
Gene position: 729263-730903 (Clockwise)
Preceding gene: 91782028
Following gene: 91782031
Centisome position: 14.9
GC content: 60.15
Gene sequence:
>1641_bases ATGGCAGCTAAAGACGTCGTATTCGGTGATTCCGCCCGTGCCAAGATGGTTGAAGGCGTGAACATCCTCGCGAACGCTGT GAAGGTCACGCTGGGCCCGAAGGGTCGCAACGTTGTCCTGGAACGCAGCTTCGGCGGCCCCACGGTCACGAAAGACGGTG TGTCGGTCGCGAAAGAGATCGAACTGAAAGACAAGCTCCAGAACATGGGCGCGCAAATGGTCAAGGAAGTGGCTTCCAAG ACCAGCGACAACGCAGGTGACGGCACCACGACCGCAACGGTCCTGGCACAGTCCATCGTTCGCGAAGGCATGAAGTACGT TGCATCGGGCATGAACCCGATGGACCTGAAGCGCGGTATCGACAAGGCTGTGTTCGCAGCGATCGAAGAACTGCGCAAGA TCAGCAAGCCGTGCACGACCAACAAGGAAATTGCACAAGTCGGCGCGATCTCGGCAAACAGCGACTCGTCGATCGGCGAT CGTATCGCTGAAGCAATGGACAAGGTCGGCAAGGAAGGCGTCATCACCGTCGAAGACGGCAAGTCGCTGCAAGACGAGTT GGACGTTGTCGAAGGTATGCAGTTCGACCGCGGCTACCTGTCGCCGTACTTCATCAACAACCCGGACAAGCAGGTTGCCG TGTTGGAGAACCCGTTCGTGCTGCTGCACGACAAGAAGGTGTCGAACATCCGTGATCTGCTGCCGATTCTGGAACAGGTC GCCAAGGCTGGCCGTCCGCTGCTGATCATCGCGGAAGACGTTGAAGGCGAAGCACTGGCTACGCTGGTGGTGAACAACAT CCGCGGCATTCTGAAGACCGTTGCTGTCAAGGCTCCGGGCTTCGGCGATCGTCGTAAGGCCATGCTGGAAGACATCGCGA TCCTGACCGGTGGTCAGGTCATCGCTGAAGAAACCGGCCTGACGCTCGAAAAGGCAACGCTGGCCGAACTGGGTCAGGCG AAGCGTATCGAAGTGGCGAAGGAAAACACCACGATCATCGACGGCGCAGGCGAAGCGGCCAACATCGAAGCACGTGTGAA GCAGGTTCGCACGCAAATCGAAGAAGCTACGTCGGACTACGACCGTGAAAAGCTGCAGGAACGCGTTGCCAAGCTGGCAG GCGGCGTTGCAGTAATCAAGGTCGGCGCTGCGACCGAAGTCGAAATGAAGGAAAAGAAGGCACGTGTCGAAGACGCACTG CACGCAACGCGCGCAGCTGTGGAAGAAGGCATCGTCGCTGGCGGCGGCGTCGCGCTGATCCGCGCACGTACGGCTATCGC TGGCCTGAAGGGCGCTAACGCCGATCAGGACGCAGGTATCAAGATCGTGCTGCGCGCGATGGAAGAGCCGCTGCGTCAGA TCGTCACGAACGGTGGCGAAGAAGCCAGCGTCGTGGTGGCGGCAGTTGCTGCTGGCACGGGCAACTACGGCTACAACGCT GCAACCGGCGAGTACGTCGACCTGGTCGACGCTGGTGTTGTCGACCCGACGAAGGTAACGCGCACGGCGCTGCAGAACGC AGCTTCGGTGGCAGGTCTCCTGCTGACCACCGACGCAGCTGTTTGCGAACTGCCGAAGGAAGATGCACCGATGGCCGGCG GCATGCCCGGCGGCATGGGCGGCATGGGCATGGACATGTAA
Upstream 100 bases:
>100_bases GCTCGTGATGCGCGAAGAAGACATCATGGCCGTGGTGCAGAAGTAAGCGCAAGCCGCTACTTTTCCCGGTTATATCCCAG AGAATTCAAGGAGTTAGAAG
Downstream 100 bases:
>100_bases TTCCGGGTTGGGCCTCATTGCGAGGCTCACCAGGAAGACATGGGGAAGCGCGCTGAAAGGCGTGCTTCCCATAAAAAAAC CCGCAGACACTGCGGGTTTT
Product: chaperonin GroEL
Products: NA
Alternate protein names: GroEL protein; Protein Cpn60 [H]
Number of amino acids: Translated: 546; Mature: 545
Protein sequence:
>546_residues MAAKDVVFGDSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASK TSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVFAAIEELRKISKPCTTNKEIAQVGAISANSDSSIGD RIAEAMDKVGKEGVITVEDGKSLQDELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPILEQV AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQVIAEETGLTLEKATLAELGQA KRIEVAKENTTIIDGAGEAANIEARVKQVRTQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDAL HATRAAVEEGIVAGGGVALIRARTAIAGLKGANADQDAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGTGNYGYNA ATGEYVDLVDAGVVDPTKVTRTALQNAASVAGLLLTTDAAVCELPKEDAPMAGGMPGGMGGMGMDM
Sequences:
>Translated_546_residues MAAKDVVFGDSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASK TSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVFAAIEELRKISKPCTTNKEIAQVGAISANSDSSIGD RIAEAMDKVGKEGVITVEDGKSLQDELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPILEQV AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQVIAEETGLTLEKATLAELGQA KRIEVAKENTTIIDGAGEAANIEARVKQVRTQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDAL HATRAAVEEGIVAGGGVALIRARTAIAGLKGANADQDAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGTGNYGYNA ATGEYVDLVDAGVVDPTKVTRTALQNAASVAGLLLTTDAAVCELPKEDAPMAGGMPGGMGGMGMDM >Mature_545_residues AAKDVVFGDSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKT SDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVFAAIEELRKISKPCTTNKEIAQVGAISANSDSSIGDR IAEAMDKVGKEGVITVEDGKSLQDELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPILEQVA KAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQVIAEETGLTLEKATLAELGQAK RIEVAKENTTIIDGAGEAANIEARVKQVRTQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALH ATRAAVEEGIVAGGGVALIRARTAIAGLKGANADQDAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGTGNYGYNAA TGEYVDLVDAGVVDPTKVTRTALQNAASVAGLLLTTDAAVCELPKEDAPMAGGMPGGMGGMGMDM
Specific function: Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions [H]
COG id: COG0459
COG function: function code O; Chaperonin GroEL (HSP60 family)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chaperonin (HSP60) family [H]
Homologues:
Organism=Homo sapiens, GI41399285, Length=528, Percent_Identity=53.4090909090909, Blast_Score=546, Evalue=1e-155, Organism=Homo sapiens, GI31542947, Length=528, Percent_Identity=53.4090909090909, Blast_Score=546, Evalue=1e-155, Organism=Homo sapiens, GI24307939, Length=350, Percent_Identity=24, Blast_Score=78, Evalue=3e-14, Organism=Escherichia coli, GI1790586, Length=529, Percent_Identity=75.6143667296786, Blast_Score=800, Evalue=0.0, Organism=Caenorhabditis elegans, GI17555558, Length=529, Percent_Identity=52.1739130434783, Blast_Score=548, Evalue=1e-156, Organism=Caenorhabditis elegans, GI193210679, Length=218, Percent_Identity=50.9174311926605, Blast_Score=217, Evalue=1e-56, Organism=Caenorhabditis elegans, GI25144674, Length=293, Percent_Identity=23.8907849829352, Blast_Score=66, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6323288, Length=526, Percent_Identity=52.0912547528517, Blast_Score=533, Evalue=1e-152, Organism=Saccharomyces cerevisiae, GI6322524, Length=375, Percent_Identity=24, Blast_Score=70, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6322446, Length=555, Percent_Identity=21.2612612612613, Blast_Score=67, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6322350, Length=565, Percent_Identity=22.6548672566372, Blast_Score=64, Evalue=5e-11, Organism=Drosophila melanogaster, GI24641193, Length=527, Percent_Identity=51.8026565464896, Blast_Score=551, Evalue=1e-157, Organism=Drosophila melanogaster, GI24641191, Length=527, Percent_Identity=51.8026565464896, Blast_Score=551, Evalue=1e-157, Organism=Drosophila melanogaster, GI45550936, Length=527, Percent_Identity=50.6641366223909, Blast_Score=533, Evalue=1e-151, Organism=Drosophila melanogaster, GI45550132, Length=527, Percent_Identity=50.6641366223909, Blast_Score=533, Evalue=1e-151, Organism=Drosophila melanogaster, GI45550935, Length=527, Percent_Identity=50.6641366223909, Blast_Score=533, Evalue=1e-151, Organism=Drosophila melanogaster, GI17864606, Length=550, Percent_Identity=43.6363636363636, Blast_Score=458, Evalue=1e-129, Organism=Drosophila melanogaster, GI24584129, Length=526, Percent_Identity=37.2623574144487, Blast_Score=327, Evalue=1e-89, Organism=Drosophila melanogaster, GI19921262, Length=526, Percent_Identity=37.2623574144487, Blast_Score=327, Evalue=1e-89, Organism=Drosophila melanogaster, GI17647245, Length=473, Percent_Identity=23.6786469344609, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI24652903, Length=446, Percent_Identity=24.2152466367713, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: 2180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 360 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 15012 Molecules/Cell In: Growth Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018370 - InterPro: IPR001844 - InterPro: IPR002423 [H]
Pfam domain/function: PF00118 Cpn60_TCP1 [H]
EC number: NA
Molecular weight: Translated: 57198; Mature: 57067
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00296 CHAPERONINS_CPN60
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKDVVFGDSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEI CCCCCCEECCCHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHH ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGI HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH DKAVFAAIEELRKISKPCTTNKEIAQVGAISANSDSSIGDRIAEAMDKVGKEGVITVEDG HHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCC KSLQDELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPILEQV CCHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHH AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQV HHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEE IAEETGLTLEKATLAELGQAKRIEVAKENTTIIDGAGEAANIEARVKQVRTQIEEATSDY EECCCCCEEHHHHHHHCCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALI HHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH RARTAIAGLKGANADQDAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGTGNYGYNA HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCC ATGEYVDLVDAGVVDPTKVTRTALQNAASVAGLLLTTDAAVCELPKEDAPMAGGMPGGMG CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCC GMGMDM CCCCCC >Mature Secondary Structure AAKDVVFGDSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEI CCCCCEECCCHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHH ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGI HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH DKAVFAAIEELRKISKPCTTNKEIAQVGAISANSDSSIGDRIAEAMDKVGKEGVITVEDG HHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCC KSLQDELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPILEQV CCHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHH AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQV HHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEE IAEETGLTLEKATLAELGQAKRIEVAKENTTIIDGAGEAANIEARVKQVRTQIEEATSDY EECCCCCEEHHHHHHHCCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALI HHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH RARTAIAGLKGANADQDAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGTGNYGYNA HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCC ATGEYVDLVDAGVVDPTKVTRTALQNAASVAGLLLTTDAAVCELPKEDAPMAGGMPGGMG CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCC GMGMDM CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA