| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782024
Identifier: 91782024
GI number: 91782024
Start: 726573
End: 727292
Strand: Direct
Name: 91782024
Synonym: Bxe_A3820
Alternate gene names: NA
Gene position: 726573-727292 (Clockwise)
Preceding gene: 91782019
Following gene: 91782027
Centisome position: 14.84
GC content: 58.06
Gene sequence:
>720_bases ATGGCCCAAGGTCATCAGGAAAACGAAAATCATCTGCTGGCCGTGCTGCCCGACCTGGAGTGGGAGCGTTTGGCGCCACA TCTTGTGCTCATGGATATGCCGTTGGGCAACGTCGTCTACGAATCGGGCGATCGCCTCAATTACGTGTATTTCCCGACCA CCTGTATCGTGTCGCTGCTGTACGTGATGGAGGACGGTGCTTCCGCCGAAATCGCGATTGTCGGCAACGAGGGGCTTATT GGCATCGCGCTGTTCATGGGTGGCGAGACCACGCCCAGCCGGGCGGTCGTGCAGAGCGCCGGCAAGGCGTATCGGCTGGA CGCTCAAATCCTGAAAGAAGAATTTCATCGCGCGGGCCCCGTGCAGCGCCTTCTGCTTCGCTATACGCAGGCGCTGATCA CGCAGATGGCGCAGACCGCCGTGTGCAATCGACACCATTCGATTGACCAGCAGTTGTGCAGGTGGCTTCTGCTCAGCATT GACCGCCTGTCTTCAAACGAATTGAAGATGACCCAGGAACTGATCGCCAATATGCTGGGTGTGCGCCGGTCCGGGGTAAC CGAGGCCGCGCTGAAATTGCAGGACGCGGGGTTGATTCGCTACAGTCACGGCCACATCGAGGTACAGGACAGACCGGGGC TCGAAAAACGTGTGTGCGAATGTTATGGCGTGGTGAAGCGCGAATTCGACCGGTTGTTGCCTGCTTTGAAAGCGTTATAA
Upstream 100 bases:
>100_bases CCGTCGAGACCCTGGAGCATTCCTCCTTCTATCCATTTTTATCGTCAGGAAATCGTCGGCGAAAGCGGCGCGGTTCCGGG CGAGTTGCGGAGAGTGTGAA
Downstream 100 bases:
>100_bases GGATCTCGCGAGGATCTGGCGTCGGCCGGCTGGAAAATCCTGCTTCTTGCGTACCAAGGCATTTCCTGGTGCGGCGGCCG TCAATTAACTTCGAACTTTC
Product: cyclic nucleotide-binding domain-containing protein
Products: NA
Alternate protein names: CRP/FNR Family Transcriptional Regulator; Crp/FNR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator-Related Protein; Regulatory Protein Crp; Transcriptional Regulator Protein; Transcriptional Regulator; Regulatory Subunit Of CAMP-Dependent Protein Kinases; Transcription Regulator Crp Family; Transcriptional Regulatory Protein; GntR Family Transcriptional Regulator; Two-Component Response Regulator Protein; Transcriptional Regulator CAP/Crp Family; Transcriptional Regulator Crp/Fnr Family Protein
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MAQGHQENENHLLAVLPDLEWERLAPHLVLMDMPLGNVVYESGDRLNYVYFPTTCIVSLLYVMEDGASAEIAIVGNEGLI GIALFMGGETTPSRAVVQSAGKAYRLDAQILKEEFHRAGPVQRLLLRYTQALITQMAQTAVCNRHHSIDQQLCRWLLLSI DRLSSNELKMTQELIANMLGVRRSGVTEAALKLQDAGLIRYSHGHIEVQDRPGLEKRVCECYGVVKREFDRLLPALKAL
Sequences:
>Translated_239_residues MAQGHQENENHLLAVLPDLEWERLAPHLVLMDMPLGNVVYESGDRLNYVYFPTTCIVSLLYVMEDGASAEIAIVGNEGLI GIALFMGGETTPSRAVVQSAGKAYRLDAQILKEEFHRAGPVQRLLLRYTQALITQMAQTAVCNRHHSIDQQLCRWLLLSI DRLSSNELKMTQELIANMLGVRRSGVTEAALKLQDAGLIRYSHGHIEVQDRPGLEKRVCECYGVVKREFDRLLPALKAL >Mature_238_residues AQGHQENENHLLAVLPDLEWERLAPHLVLMDMPLGNVVYESGDRLNYVYFPTTCIVSLLYVMEDGASAEIAIVGNEGLIG IALFMGGETTPSRAVVQSAGKAYRLDAQILKEEFHRAGPVQRLLLRYTQALITQMAQTAVCNRHHSIDQQLCRWLLLSID RLSSNELKMTQELIANMLGVRRSGVTEAALKLQDAGLIRYSHGHIEVQDRPGLEKRVCECYGVVKREFDRLLPALKAL
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26763; Mature: 26632
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQGHQENENHLLAVLPDLEWERLAPHLVLMDMPLGNVVYESGDRLNYVYFPTTCIVSLL CCCCCCCCCCCEEEEECCCCHHHHCCEEEEEECCCCHHEECCCCEEEEEEECHHHHHHHH YVMEDGASAEIAIVGNEGLIGIALFMGGETTPSRAVVQSAGKAYRLDAQILKEEFHRAGP HHHCCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHCCCEEEHHHHHHHHHHHCCCH VQRLLLRYTQALITQMAQTAVCNRHHSIDQQLCRWLLLSIDRLSSNELKMTQELIANMLG HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VRRSGVTEAALKLQDAGLIRYSHGHIEVQDRPGLEKRVCECYGVVKREFDRLLPALKAL HHHCCHHHHHHHHHCCCEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AQGHQENENHLLAVLPDLEWERLAPHLVLMDMPLGNVVYESGDRLNYVYFPTTCIVSLL CCCCCCCCCCEEEEECCCCHHHHCCEEEEEECCCCHHEECCCCEEEEEEECHHHHHHHH YVMEDGASAEIAIVGNEGLIGIALFMGGETTPSRAVVQSAGKAYRLDAQILKEEFHRAGP HHHCCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHCCCEEEHHHHHHHHHHHCCCH VQRLLLRYTQALITQMAQTAVCNRHHSIDQQLCRWLLLSIDRLSSNELKMTQELIANMLG HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VRRSGVTEAALKLQDAGLIRYSHGHIEVQDRPGLEKRVCECYGVVKREFDRLLPALKAL HHHCCHHHHHHHHHCCCEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA