| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yfeX [H]
Identifier: 91782011
GI number: 91782011
Start: 712512
End: 713576
Strand: Reverse
Name: yfeX [H]
Synonym: Bxe_A3833
Alternate gene names: 91782011
Gene position: 713576-712512 (Counterclockwise)
Preceding gene: 91782014
Following gene: 91782010
Centisome position: 14.58
GC content: 63.19
Gene sequence:
>1065_bases ATGCCCAAAGACATCCCAGAGCCGCAAGCCATTTGTAATGACGTTACCCGTAGCGCGATCTTCATTGTCGCGACGATCGA AGCCGGCCGCGATCACGCAGACAAGGTGCGTGCATGGTGCGGCGATGTTGCCGCCCTCGTGCGCTCGGTCGGCAGGCGGG TCCCCTCCGGCAATCTGTCGTGCGTGTGCGGCTTCGGCTCCGACGCATGGGATACGCTATTCGGCGCCCCGCGCCCCGCA GGCCTGCACCCGTTCCGGGAATTCGGCTCGGGCGAACGCCTGGCTGTAGCGACCCCCGGCGACATCCTGCTGCATATTCG CGCCGAGCACATGGACCTCTGTTTCGAGCTCGCCACGCAACTGCTGGGAGCGCTCGGCGACGCAGTCACGGTAACTGACG AAGTTCACGGCTTTCGCAACTTCGACATGCGCGCGATGGTGGGCTTCGTCGATGGCACGGAAAATCCGGCGGGTCGCGCC GCTGAGAAATTCACGCTGATCGCCGATGAGGATCCCGAGTTCGAGGGCGGCAGCTACGTTATCGTGCAGAAGTACCTGCA TGACATGGCCGGCTGGAATGCGCTCTCCGTCGAGACTCAGGAGCGCATTATCGGCCGCACGAAATTATCCGACATCGAAC TGGATGAAGCGGTGAAGCCGTCGTGCTCGCACAGCTCGCTCACCACCCTCACCGAGAACGGCGAGGAAGTGAAGATCCTG CGCGACAACATGCCGTTCGGCAGGCCCGGCGCAGGCGAGTTCGGCACCTACTTCATCGGTTATGCCCGCTCGCCCGCACC GACCGAGCAGATGCTGGAAAACATGTTCGTCGGGCGGCCGCCGGGCAACTACGACCGGCTGCTCGACTATAGCCGCGCGG TTACCGGCGGCCTCTTCTTCGTCCCATCGGCTACCCTGCTCGAAGCACTCGCAGACCGCGATCCGCAAGCGAGCGCTGCC GCTGCCGATGGCGGGCAACAGCCCGATACGTCTTCGTCCGCAGAGCCGCAGGAAGGCGGCTCGTTGAACATTGGCTCTCT CAAGGGAATCTCCCAATATGAATAA
Upstream 100 bases:
>100_bases CGAACCCTTCCTGGCTGTCCCGGGCAGGTGATCGCGCAGTCGGAACCGCATTCGCAGTACTGCTGCCGGAATTCGCAACG ATCTATCCATACCCAACCCG
Downstream 100 bases:
>100_bases CCTGCATCGCGAGCTCGCCCCCATCTCCCGTGCGGCCTGGTCGCAGATCGAAGATGAAGTGGCGCGCACCTTCAGGCGCA GCGTCGCCGGCCGTCGCGTG
Product: Dyp-type peroxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MPKDIPEPQAICNDVTRSAIFIVATIEAGRDHADKVRAWCGDVAALVRSVGRRVPSGNLSCVCGFGSDAWDTLFGAPRPA GLHPFREFGSGERLAVATPGDILLHIRAEHMDLCFELATQLLGALGDAVTVTDEVHGFRNFDMRAMVGFVDGTENPAGRA AEKFTLIADEDPEFEGGSYVIVQKYLHDMAGWNALSVETQERIIGRTKLSDIELDEAVKPSCSHSSLTTLTENGEEVKIL RDNMPFGRPGAGEFGTYFIGYARSPAPTEQMLENMFVGRPPGNYDRLLDYSRAVTGGLFFVPSATLLEALADRDPQASAA AADGGQQPDTSSSAEPQEGGSLNIGSLKGISQYE
Sequences:
>Translated_354_residues MPKDIPEPQAICNDVTRSAIFIVATIEAGRDHADKVRAWCGDVAALVRSVGRRVPSGNLSCVCGFGSDAWDTLFGAPRPA GLHPFREFGSGERLAVATPGDILLHIRAEHMDLCFELATQLLGALGDAVTVTDEVHGFRNFDMRAMVGFVDGTENPAGRA AEKFTLIADEDPEFEGGSYVIVQKYLHDMAGWNALSVETQERIIGRTKLSDIELDEAVKPSCSHSSLTTLTENGEEVKIL RDNMPFGRPGAGEFGTYFIGYARSPAPTEQMLENMFVGRPPGNYDRLLDYSRAVTGGLFFVPSATLLEALADRDPQASAA AADGGQQPDTSSSAEPQEGGSLNIGSLKGISQYE >Mature_353_residues PKDIPEPQAICNDVTRSAIFIVATIEAGRDHADKVRAWCGDVAALVRSVGRRVPSGNLSCVCGFGSDAWDTLFGAPRPAG LHPFREFGSGERLAVATPGDILLHIRAEHMDLCFELATQLLGALGDAVTVTDEVHGFRNFDMRAMVGFVDGTENPAGRAA EKFTLIADEDPEFEGGSYVIVQKYLHDMAGWNALSVETQERIIGRTKLSDIELDEAVKPSCSHSSLTTLTENGEEVKILR DNMPFGRPGAGEFGTYFIGYARSPAPTEQMLENMFVGRPPGNYDRLLDYSRAVTGGLFFVPSATLLEALADRDPQASAAA ADGGQQPDTSSSAEPQEGGSLNIGSLKGISQYE
Specific function: Unknown
COG id: COG2837
COG function: function code P; Predicted iron-dependent peroxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DyP-type peroxidase family [H]
Homologues:
Organism=Escherichia coli, GI87082102, Length=294, Percent_Identity=36.3945578231293, Blast_Score=179, Evalue=3e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011008 - InterPro: IPR006314 [H]
Pfam domain/function: PF04261 Dyp_perox [H]
EC number: NA
Molecular weight: Translated: 38016; Mature: 37885
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKDIPEPQAICNDVTRSAIFIVATIEAGRDHADKVRAWCGDVAALVRSVGRRVPSGNLS CCCCCCCHHHHHHHHHHCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCE CVCGFGSDAWDTLFGAPRPAGLHPFREFGSGERLAVATPGDILLHIRAEHMDLCFELATQ EEEECCCCHHHHHHCCCCCCCCCHHHHCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHH LLGALGDAVTVTDEVHGFRNFDMRAMVGFVDGTENPAGRAAEKFTLIADEDPEFEGGSYV HHHHCCCCEEEEHHHCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCEE IVQKYLHDMAGWNALSVETQERIIGRTKLSDIELDEAVKPSCSHSSLTTLTENGEEVKIL EHHHHHHHHHCCCEEEECHHHHHHHHCCCCCCCHHHHCCCCCCCCCCEEECCCCCEEEEE RDNMPFGRPGAGEFGTYFIGYARSPAPTEQMLENMFVGRPPGNYDRLLDYSRAVTGGLFF ECCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEE VPSATLLEALADRDPQASAAAADGGQQPDTSSSAEPQEGGSLNIGSLKGISQYE CCHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PKDIPEPQAICNDVTRSAIFIVATIEAGRDHADKVRAWCGDVAALVRSVGRRVPSGNLS CCCCCCHHHHHHHHHHCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCE CVCGFGSDAWDTLFGAPRPAGLHPFREFGSGERLAVATPGDILLHIRAEHMDLCFELATQ EEEECCCCHHHHHHCCCCCCCCCHHHHCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHH LLGALGDAVTVTDEVHGFRNFDMRAMVGFVDGTENPAGRAAEKFTLIADEDPEFEGGSYV HHHHCCCCEEEEHHHCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCEE IVQKYLHDMAGWNALSVETQERIIGRTKLSDIELDEAVKPSCSHSSLTTLTENGEEVKIL EHHHHHHHHHCCCEEEECHHHHHHHHCCCCCCCHHHHCCCCCCCCCCEEECCCCCEEEEE RDNMPFGRPGAGEFGTYFIGYARSPAPTEQMLENMFVGRPPGNYDRLLDYSRAVTGGLFF ECCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEE VPSATLLEALADRDPQASAAAADGGQQPDTSSSAEPQEGGSLNIGSLKGISQYE CCHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]