| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is wcaI [H]
Identifier: 91781984
GI number: 91781984
Start: 677389
End: 678741
Strand: Direct
Name: wcaI [H]
Synonym: Bxe_A3860
Alternate gene names: 91781984
Gene position: 677389-678741 (Clockwise)
Preceding gene: 91781983
Following gene: 91781986
Centisome position: 13.84
GC content: 66.74
Gene sequence:
>1353_bases ATGAAGATACTGATCTACGGCATCAACTATGCGCCTGAACTGACGGGAGTGGGCAAGTACACGGCGGAAATGGCCGTGCT GCTGGCTGACCGCGGGCATGAAGTGCGCGTGGTGTGCGCGCCGCCGTATTACCCCGAGTGGCGCGTTTCAGAGGGCTACG CGTCGTGGCGGTATCAGCACGAGACACGCGACGGCGTGGCGGTCTGGCGCGCGCCGCTGTGGGTGCCGTCGCGCCCGAGC GGCCTGAAGCGCATGCTGCATCTGGCCACTTTCGCGGCAACCTCGCTGCCGCTGCTCGCATGGCAGGCGCTGTGGCGTCC GCACGCGGTGATGCTGATCGCACCGACCCTGATGTGCGCGCCGGCTTCGCTGATGCTCGCGCGTATCACACGCGCGAGCG CATGGCTGCATATTCAGGACTACGAGGTCGATGCGGCCTTCGATCTGGGTCTGCTGAAAAGCTCGCGCGCGGCCCGCACG GCGCGCTGGATCGAAAGCGCGTTGCTGAAGCGCTTCGATGCGGTGTCGTCGATTACGCGGCAGATGAGCGCGCGCGCGAC GACCAAGGGTGTCGATGCATCGAAGGTGGTCTGCCTGCCGAACTGGGTCGATGTGTCGACTATTTTCCCGCTTGCACGGC CGAGCGAATTCCGCCGTCTCCTCGGCATTCCCGCGGAGCAGAAAGTGGTGCTGTACTCCGGCAACATGGGCGCGAAGCAG GGCATTGAAACACTCGCCGACGCGGCGGTCGCGCTCGCCGCGCGTCCTGACCTCACCTTCGTGTTCTGCGGCAGCGGCGC CGCAAGAGAGAATCTGCTCGAACGCTGCTCCGGTTTGACGAATTGCGTGTTCATGCCGCTGCAACCGGTGGAACGTCTGA ACGAACTGCTCAATCTCGCCGATATTCACGTGCTCCCGCAACGCGGCGACGCGGCGGATCTCGTCATGCCGTCCAAGCTC ACCGGCATGTTCGCGAGCGGCCGCGCAACCATCGCGATGGCGCGCCGTGGCACGGCACTCTACGAAGCCGTGGCGCCGCG CGGCGTGGTCGTGCCGCCGGACAACGTGAAAGCGCTGGCGGCGGCGATCACGGTGCTGGCGGGCGACGCGGAACGGCGCA CGGCGCTCGGCAAGGCGGCACGCAATTACGCGGAGCGCGCGCTCTCGCCGGAGTCGACGATTCGCACCTTCGAGGAGCGG CTCGCGGTGCTGTTGCGTGAGTCGGGGCTAGAAGATGCGGAAGATGCGAAACGTGCGAAAGGCGCGCCACCTTCTTTCGG TCCGCGGCCTTCAGGAGCCGCGGGCCGGCGGCGACGCAAACCGGCCACGGCGGAGGAAGCCGCGCCGGATTGA
Upstream 100 bases:
>100_bases TGCCAATATCGCTCGCGGCTGTGCGTTGATGTTGAGCGACTGAGTCGCTTCGCACCACCGCGTTGCGCGCACGAAGCCCT AACCCGTTCTGGCAGTCACG
Downstream 100 bases:
>100_bases TCCGGCACGCGGCCTGATCATGAAGCTGATATCACCACGGAGAGCGATAGACGCCGCGCTTGCTCGCATAGGGATCGGCG TACGTGGTGGTCGCCGCGGC
Product: putative glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MKILIYGINYAPELTGVGKYTAEMAVLLADRGHEVRVVCAPPYYPEWRVSEGYASWRYQHETRDGVAVWRAPLWVPSRPS GLKRMLHLATFAATSLPLLAWQALWRPHAVMLIAPTLMCAPASLMLARITRASAWLHIQDYEVDAAFDLGLLKSSRAART ARWIESALLKRFDAVSSITRQMSARATTKGVDASKVVCLPNWVDVSTIFPLARPSEFRRLLGIPAEQKVVLYSGNMGAKQ GIETLADAAVALAARPDLTFVFCGSGAARENLLERCSGLTNCVFMPLQPVERLNELLNLADIHVLPQRGDAADLVMPSKL TGMFASGRATIAMARRGTALYEAVAPRGVVVPPDNVKALAAAITVLAGDAERRTALGKAARNYAERALSPESTIRTFEER LAVLLRESGLEDAEDAKRAKGAPPSFGPRPSGAAGRRRRKPATAEEAAPD
Sequences:
>Translated_450_residues MKILIYGINYAPELTGVGKYTAEMAVLLADRGHEVRVVCAPPYYPEWRVSEGYASWRYQHETRDGVAVWRAPLWVPSRPS GLKRMLHLATFAATSLPLLAWQALWRPHAVMLIAPTLMCAPASLMLARITRASAWLHIQDYEVDAAFDLGLLKSSRAART ARWIESALLKRFDAVSSITRQMSARATTKGVDASKVVCLPNWVDVSTIFPLARPSEFRRLLGIPAEQKVVLYSGNMGAKQ GIETLADAAVALAARPDLTFVFCGSGAARENLLERCSGLTNCVFMPLQPVERLNELLNLADIHVLPQRGDAADLVMPSKL TGMFASGRATIAMARRGTALYEAVAPRGVVVPPDNVKALAAAITVLAGDAERRTALGKAARNYAERALSPESTIRTFEER LAVLLRESGLEDAEDAKRAKGAPPSFGPRPSGAAGRRRRKPATAEEAAPD >Mature_450_residues MKILIYGINYAPELTGVGKYTAEMAVLLADRGHEVRVVCAPPYYPEWRVSEGYASWRYQHETRDGVAVWRAPLWVPSRPS GLKRMLHLATFAATSLPLLAWQALWRPHAVMLIAPTLMCAPASLMLARITRASAWLHIQDYEVDAAFDLGLLKSSRAART ARWIESALLKRFDAVSSITRQMSARATTKGVDASKVVCLPNWVDVSTIFPLARPSEFRRLLGIPAEQKVVLYSGNMGAKQ GIETLADAAVALAARPDLTFVFCGSGAARENLLERCSGLTNCVFMPLQPVERLNELLNLADIHVLPQRGDAADLVMPSKL TGMFASGRATIAMARRGTALYEAVAPRGVVVPPDNVKALAAAITVLAGDAERRTALGKAARNYAERALSPESTIRTFEER LAVLLRESGLEDAEDAKRAKGAPPSFGPRPSGAAGRRRRKPATAEEAAPD
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788363, Length=414, Percent_Identity=43.719806763285, Blast_Score=305, Evalue=3e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 48904; Mature: 48904
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILIYGINYAPELTGVGKYTAEMAVLLADRGHEVRVVCAPPYYPEWRVSEGYASWRYQH CEEEEEECCCCCCCCCCCHHHHHHHHEEECCCCEEEEEECCCCCCCCEECCCCHHCEEEC ETRDGVAVWRAPLWVPSRPSGLKRMLHLATFAATSLPLLAWQALWRPHAVMLIAPTLMCA CCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHC PASLMLARITRASAWLHIQDYEVDAAFDLGLLKSSRAARTARWIESALLKRFDAVSSITR HHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH QMSARATTKGVDASKVVCLPNWVDVSTIFPLARPSEFRRLLGIPAEQKVVLYSGNMGAKQ HHHHHHHHCCCCCCEEEECCCCCCHHHHCCCCCCHHHHHHHCCCCCCEEEEEECCCCHHH GIETLADAAVALAARPDLTFVFCGSGAARENLLERCSGLTNCVFMPLQPVERLNELLNLA HHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHH DIHVLPQRGDAADLVMPSKLTGMFASGRATIAMARRGTALYEAVAPRGVVVPPDNVKALA HEEEECCCCCCCCEECCHHHHHHCCCCCEEEEEECCCCHHHHHHCCCCEEECCCCHHHHH AAITVLAGDAERRTALGKAARNYAERALSPESTIRTFEERLAVLLRESGLEDAEDAKRAK HHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHC GAPPSFGPRPSGAAGRRRRKPATAEEAAPD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKILIYGINYAPELTGVGKYTAEMAVLLADRGHEVRVVCAPPYYPEWRVSEGYASWRYQH CEEEEEECCCCCCCCCCCHHHHHHHHEEECCCCEEEEEECCCCCCCCEECCCCHHCEEEC ETRDGVAVWRAPLWVPSRPSGLKRMLHLATFAATSLPLLAWQALWRPHAVMLIAPTLMCA CCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHC PASLMLARITRASAWLHIQDYEVDAAFDLGLLKSSRAARTARWIESALLKRFDAVSSITR HHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH QMSARATTKGVDASKVVCLPNWVDVSTIFPLARPSEFRRLLGIPAEQKVVLYSGNMGAKQ HHHHHHHHCCCCCCEEEECCCCCCHHHHCCCCCCHHHHHHHCCCCCCEEEEEECCCCHHH GIETLADAAVALAARPDLTFVFCGSGAARENLLERCSGLTNCVFMPLQPVERLNELLNLA HHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHH DIHVLPQRGDAADLVMPSKLTGMFASGRATIAMARRGTALYEAVAPRGVVVPPDNVKALA HEEEECCCCCCCCEECCHHHHHHCCCCCEEEEEECCCCHHHHHHCCCCEEECCCCHHHHH AAITVLAGDAERRTALGKAARNYAERALSPESTIRTFEERLAVLLRESGLEDAEDAKRAK HHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHC GAPPSFGPRPSGAAGRRRRKPATAEEAAPD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7815923; 8759852; 9097040; 9278503 [H]