| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781963
Identifier: 91781963
GI number: 91781963
Start: 650599
End: 652083
Strand: Reverse
Name: 91781963
Synonym: Bxe_A3881
Alternate gene names: NA
Gene position: 652083-650599 (Counterclockwise)
Preceding gene: 91781966
Following gene: 91781962
Centisome position: 13.32
GC content: 68.01
Gene sequence:
>1485_bases ATGAAGCCTGCCACCGGCCGCAGAAGCCCTCCCCGTCTCGTCGCCCGTTTCGTCGCGATCTCCTGGCGCGATCTCGCCGT CTCGTTCGGGCCGATCCTGCTGATCGCCGCCGTTGCGATCTGGGTCGCCGTGCGTCTGATCCAGCCGGCACCGCCCAACA CGCTGACAATCAGCGCCGGCCCGGAAGGCAGCACCTTCTGGAACGCGGCGCAGAAGTACAAGGAGATTCTGGCGCGCAAC CGCATCACGCTGAATGTGCTGTCCTCGGAAGGCTCGCTGCAGAATCTCAAGCGCCTGTCCGATCCGAAGTCGAACGTGGA TGTCGGCTTCGTGCAGGACGGCGTCGCGCCCGGCCCGGCAGCCCGAGGTCTCATGTCGCTCGGCAGCGTGGCCTATGTGC CGCTCGCGATCTTCTATCACGGCCCGACCGTCACGCGGCTCTCCGAATTCAAGGGCGAGCGGCTCGCGGTCGGCGCCGAA GGCAGTGGCACGCGCGAGCTGGCGCTCGCGCTCCTCAAGGCCAACGGCATCGTGCCGGGCGGCGCGACCCGGCTGCTGCC GCTCTCGGGCGACGACGCCGCCAGCGCACTCGTCTCCGGCAAGGTCGACGCGGCGTTCCTCGCCGGCGATTCGGCGCAAC CGGCTGTGATGGGCAAGCTCTACCGCACGCCGAACGTGCAGTTCTACGATTTCTCGCAGGCCGACGCCTACACGCGCCGC TTTCCCTATCTGACCCAGCTCACGATGCCCATGGGCGCGTTCGACCTCGGCAAGAATCTGCCGGCCGCGCCGATTCATAT GGTGGCGCCGACCGCCGAGCTGGTGGCGCGCGACTCGCTGCATCCCGCGCTGTCCGATCTGTTGATCGAGGCCGCGCGCG AGGTGCACGGCAAGGCGAACATCCTGCAGCGCGCCGGCGAATTCCCCGCGCCGCTCGCGCACGATTTCCCGATCAGCGAC GACGCCGCGCGCTACTACAAGTCGGGCAAGAGCTTCCTCTACCGGATCCTGCCGTTCTGGCTCGCGAGTCTCGCCGACCG GCTGCTGGTGGTCGTGGTGCCGCTGATCGTGCTGCTGGTGCCGGCCTTGCGTCTCGTGCCGTCGCTGTATGCATGGCGGG TGAAATCGCGCATCTATCGCTGGTACGGCGCGCTGATCGCGATCGAACGCAGCGCGCTCAGCGACCATTCGCCCACCGAA CGCGCGTCGCTGCTCGAACGGCTCGACGCTATCGAGGAATCCGTCAACGGTCTGAAGATGCCGCTCGCCTACGCCGATCA GTTTTACGTGCTGCGCGAGCACATCGGCTTCGTGCGCCAGCGTCTCACGCAGCCGCGCGAGACGCAGCGCGACGGCGCCG GGAATGAAACGCAAGGCACGGGCAACGGGCCCGGCGAAGCCGGCGCTCCGCCCGCGCCGTCCGCCGCGAACGAAGCGGCT GAAATCGGCGAAACGCCCAACGGCGGCGCCGCGAAACCATATTGA
Upstream 100 bases:
>100_bases GGTACCATCGGCGCGACGCCCGCTGCCGCGCGGCTCGTGCGCCATTCGCCGCAGCGCGCCGTCCCTGTTCACTTTCGACC GTAGCCGCCACCGTCATCCG
Downstream 100 bases:
>100_bases CGGGTTATTGACGGGTGCAAGCCGCGACCGCACCGCGTAAGATCATTACAATTTCGACGGTTTAGCAGACGCGCCGTTCG GACCAGCAATCCGGGAGACA
Product: hypothetical protein
Products: NA
Alternate protein names: TRAP Transporter Solute Receptor TAXI Family; TRAP-Type Transport System Periplasmic Component Protein; TRAP-Type Transport System Periplasmic Protein; Trap Transporter Solute Receptor Taxi Family Protein; TAXI Family TRAP Transporter Solute Receptor; Signal Peptide; TRAP-Type Transport System Periplasmic Component-Like; Trap Transporter Solute Receptor Taxi Family
Number of amino acids: Translated: 494; Mature: 494
Protein sequence:
>494_residues MKPATGRRSPPRLVARFVAISWRDLAVSFGPILLIAAVAIWVAVRLIQPAPPNTLTISAGPEGSTFWNAAQKYKEILARN RITLNVLSSEGSLQNLKRLSDPKSNVDVGFVQDGVAPGPAARGLMSLGSVAYVPLAIFYHGPTVTRLSEFKGERLAVGAE GSGTRELALALLKANGIVPGGATRLLPLSGDDAASALVSGKVDAAFLAGDSAQPAVMGKLYRTPNVQFYDFSQADAYTRR FPYLTQLTMPMGAFDLGKNLPAAPIHMVAPTAELVARDSLHPALSDLLIEAAREVHGKANILQRAGEFPAPLAHDFPISD DAARYYKSGKSFLYRILPFWLASLADRLLVVVVPLIVLLVPALRLVPSLYAWRVKSRIYRWYGALIAIERSALSDHSPTE RASLLERLDAIEESVNGLKMPLAYADQFYVLREHIGFVRQRLTQPRETQRDGAGNETQGTGNGPGEAGAPPAPSAANEAA EIGETPNGGAAKPY
Sequences:
>Translated_494_residues MKPATGRRSPPRLVARFVAISWRDLAVSFGPILLIAAVAIWVAVRLIQPAPPNTLTISAGPEGSTFWNAAQKYKEILARN RITLNVLSSEGSLQNLKRLSDPKSNVDVGFVQDGVAPGPAARGLMSLGSVAYVPLAIFYHGPTVTRLSEFKGERLAVGAE GSGTRELALALLKANGIVPGGATRLLPLSGDDAASALVSGKVDAAFLAGDSAQPAVMGKLYRTPNVQFYDFSQADAYTRR FPYLTQLTMPMGAFDLGKNLPAAPIHMVAPTAELVARDSLHPALSDLLIEAAREVHGKANILQRAGEFPAPLAHDFPISD DAARYYKSGKSFLYRILPFWLASLADRLLVVVVPLIVLLVPALRLVPSLYAWRVKSRIYRWYGALIAIERSALSDHSPTE RASLLERLDAIEESVNGLKMPLAYADQFYVLREHIGFVRQRLTQPRETQRDGAGNETQGTGNGPGEAGAPPAPSAANEAA EIGETPNGGAAKPY >Mature_494_residues MKPATGRRSPPRLVARFVAISWRDLAVSFGPILLIAAVAIWVAVRLIQPAPPNTLTISAGPEGSTFWNAAQKYKEILARN RITLNVLSSEGSLQNLKRLSDPKSNVDVGFVQDGVAPGPAARGLMSLGSVAYVPLAIFYHGPTVTRLSEFKGERLAVGAE GSGTRELALALLKANGIVPGGATRLLPLSGDDAASALVSGKVDAAFLAGDSAQPAVMGKLYRTPNVQFYDFSQADAYTRR FPYLTQLTMPMGAFDLGKNLPAAPIHMVAPTAELVARDSLHPALSDLLIEAAREVHGKANILQRAGEFPAPLAHDFPISD DAARYYKSGKSFLYRILPFWLASLADRLLVVVVPLIVLLVPALRLVPSLYAWRVKSRIYRWYGALIAIERSALSDHSPTE RASLLERLDAIEESVNGLKMPLAYADQFYVLREHIGFVRQRLTQPRETQRDGAGNETQGTGNGPGEAGAPPAPSAANEAA EIGETPNGGAAKPY
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53013; Mature: 53013
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPATGRRSPPRLVARFVAISWRDLAVSFGPILLIAAVAIWVAVRLIQPAPPNTLTISAG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC PEGSTFWNAAQKYKEILARNRITLNVLSSEGSLQNLKRLSDPKSNVDVGFVQDGVAPGPA CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCCCCEEEECCCCCCCHH ARGLMSLGSVAYVPLAIFYHGPTVTRLSEFKGERLAVGAEGSGTRELALALLKANGIVPG HHHHHHHCHHHHHHEEEEECCCCHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCC GATRLLPLSGDDAASALVSGKVDAAFLAGDSAQPAVMGKLYRTPNVQFYDFSQADAYTRR CCCEEEECCCCHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEECCHHHHHHHH FPYLTQLTMPMGAFDLGKNLPAAPIHMVAPTAELVARDSLHPALSDLLIEAAREVHGKAN CCHHHHHHCCCCHHHHCCCCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ILQRAGEFPAPLAHDFPISDDAARYYKSGKSFLYRILPFWLASLADRLLVVVVPLIVLLV HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PALRLVPSLYAWRVKSRIYRWYGALIAIERSALSDHSPTERASLLERLDAIEESVNGLKM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC PLAYADQFYVLREHIGFVRQRLTQPRETQRDGAGNETQGTGNGPGEAGAPPAPSAANEAA CHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH EIGETPNGGAAKPY HCCCCCCCCCCCCC >Mature Secondary Structure MKPATGRRSPPRLVARFVAISWRDLAVSFGPILLIAAVAIWVAVRLIQPAPPNTLTISAG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC PEGSTFWNAAQKYKEILARNRITLNVLSSEGSLQNLKRLSDPKSNVDVGFVQDGVAPGPA CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCCCCEEEECCCCCCCHH ARGLMSLGSVAYVPLAIFYHGPTVTRLSEFKGERLAVGAEGSGTRELALALLKANGIVPG HHHHHHHCHHHHHHEEEEECCCCHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCC GATRLLPLSGDDAASALVSGKVDAAFLAGDSAQPAVMGKLYRTPNVQFYDFSQADAYTRR CCCEEEECCCCHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEECCHHHHHHHH FPYLTQLTMPMGAFDLGKNLPAAPIHMVAPTAELVARDSLHPALSDLLIEAAREVHGKAN CCHHHHHHCCCCHHHHCCCCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ILQRAGEFPAPLAHDFPISDDAARYYKSGKSFLYRILPFWLASLADRLLVVVVPLIVLLV HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PALRLVPSLYAWRVKSRIYRWYGALIAIERSALSDHSPTERASLLERLDAIEESVNGLKM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC PLAYADQFYVLREHIGFVRQRLTQPRETQRDGAGNETQGTGNGPGEAGAPPAPSAANEAA CHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH EIGETPNGGAAKPY HCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA