| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781962
Identifier: 91781962
GI number: 91781962
Start: 649845
End: 650495
Strand: Reverse
Name: 91781962
Synonym: Bxe_A3882
Alternate gene names: NA
Gene position: 650495-649845 (Counterclockwise)
Preceding gene: 91781963
Following gene: 91781961
Centisome position: 13.29
GC content: 62.21
Gene sequence:
>651_bases ATGACCGTTGGCATCGACGCCAGACAACCGCTGTGGTTTTACGACTTTGTCTCGCCGTTCACGTACCTGTTGCTCGAGCA ACATGACAAATGGCCGGGCTTCGACTTCGTGTTCACGCCGGTCGTGCTGAACGACCTCTATCGTCACTGGGGGCAGCGGC CGGCTTACGGCGTGCCCTCGAAGCGCACCTTCATGTACCGGCACGCGCTGTTTCGCGCGGAACAGCTCGGCATTCCGTAC AGGATGCCGCCGGCTCATCCGTTCGATTCCATGAAGCCCCTGTTGCTCGCCACCGCCGCGAACGGCGACGTCAATTTCGT GCGCGAGATTTTCCGCTTCATCTGGCGCGAAGGCCGCGATCCGTCCACGAACGAGGCCTTTGCGGAACTGTGCGAGCGCG TCGGCCTGCCCGAGGGCCCGGAACTCATCAAGGATCCGGAAGTGAAGGCGCAACTGCAGCGCAACACGGCGGACGCGATC GGCCTGGGTGTCTACGGCGTGCCGACCTTCCGTCTGAACGATCAGTTGTTCTGGGGCGAAGACGCGCTGCCTATGGTGCT GTACTGCGCCCGCACGCCGAACTGGCTCGAATCGAAAGAAGTCAAACGGATCAGCACGCTGCCGTCCGGACTCGTGGATT CGCAGACGTAG
Upstream 100 bases:
>100_bases GTTATTGACGGGTGCAAGCCGCGACCGCACCGCGTAAGATCATTACAATTTCGACGGTTTAGCAGACGCGCCGTTCGGAC CAGCAATCCGGGAGACATTT
Downstream 100 bases:
>100_bases GCGACACGGAAGCCTGAAGCAGGCGTGAGGCGCGTCCCGCGCGGCACCCTGGCGCGTTTGTCAGGGCGAAATGGTCCTGC TGATGCCGGCCATACCGTGC
Product: putative isomerase
Products: NA
Alternate protein names: 2-Hydroxychromene-2-Carboxylate Isomerase; 2-Hydroxychromene-2-Carboxylate Isomerase Family Protein; Dsba Oxidoreductase; Isomerase; DSBA-Like Thioredoxin Domain Protein; Thioredoxin Domain Protein; Thioredoxin Oxidoreductase
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MTVGIDARQPLWFYDFVSPFTYLLLEQHDKWPGFDFVFTPVVLNDLYRHWGQRPAYGVPSKRTFMYRHALFRAEQLGIPY RMPPAHPFDSMKPLLLATAANGDVNFVREIFRFIWREGRDPSTNEAFAELCERVGLPEGPELIKDPEVKAQLQRNTADAI GLGVYGVPTFRLNDQLFWGEDALPMVLYCARTPNWLESKEVKRISTLPSGLVDSQT
Sequences:
>Translated_216_residues MTVGIDARQPLWFYDFVSPFTYLLLEQHDKWPGFDFVFTPVVLNDLYRHWGQRPAYGVPSKRTFMYRHALFRAEQLGIPY RMPPAHPFDSMKPLLLATAANGDVNFVREIFRFIWREGRDPSTNEAFAELCERVGLPEGPELIKDPEVKAQLQRNTADAI GLGVYGVPTFRLNDQLFWGEDALPMVLYCARTPNWLESKEVKRISTLPSGLVDSQT >Mature_215_residues TVGIDARQPLWFYDFVSPFTYLLLEQHDKWPGFDFVFTPVVLNDLYRHWGQRPAYGVPSKRTFMYRHALFRAEQLGIPYR MPPAHPFDSMKPLLLATAANGDVNFVREIFRFIWREGRDPSTNEAFAELCERVGLPEGPELIKDPEVKAQLQRNTADAIG LGVYGVPTFRLNDQLFWGEDALPMVLYCARTPNWLESKEVKRISTLPSGLVDSQT
Specific function: Unknown
COG id: COG3917
COG function: function code Q; 2-hydroxychromene-2-carboxylate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24855; Mature: 24724
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVGIDARQPLWFYDFVSPFTYLLLEQHDKWPGFDFVFTPVVLNDLYRHWGQRPAYGVPS CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC KRTFMYRHALFRAEQLGIPYRMPPAHPFDSMKPLLLATAANGDVNFVREIFRFIWREGRD CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCC PSTNEAFAELCERVGLPEGPELIKDPEVKAQLQRNTADAIGLGVYGVPTFRLNDQLFWGE CCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHCCHHHHCCCEECCCEEEECCEEEECC DALPMVLYCARTPNWLESKEVKRISTLPSGLVDSQT CCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TVGIDARQPLWFYDFVSPFTYLLLEQHDKWPGFDFVFTPVVLNDLYRHWGQRPAYGVPS CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC KRTFMYRHALFRAEQLGIPYRMPPAHPFDSMKPLLLATAANGDVNFVREIFRFIWREGRD CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCC PSTNEAFAELCERVGLPEGPELIKDPEVKAQLQRNTADAIGLGVYGVPTFRLNDQLFWGE CCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHCCHHHHCCCEECCCEEEECCEEEECC DALPMVLYCARTPNWLESKEVKRISTLPSGLVDSQT CCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA