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The map label for this gene is nahR [H]

Identifier: 91781961

GI number: 91781961

Start: 648619

End: 649599

Strand: Reverse

Name: nahR [H]

Synonym: Bxe_A3883

Alternate gene names: 91781961

Gene position: 649599-648619 (Counterclockwise)

Preceding gene: 91781962

Following gene: 91781956

Centisome position: 13.27

GC content: 66.56

Gene sequence:

>981_bases
ATGGACGACACCGCCGCCTCCCTCGATATCTGGCTCGTGCGCGTGCTGCGCACGCTGCTGGTCGAGCGCAGCGTCACGCA
GACCGCGCTGCGCCTGAATCAGACCCAGCCGGCTATCAGCACCGCGCTGCGCAAACTGCGCGAGACGCTGAACGACCCGA
TTCTCGTGCGCGGCAAGTCGGGCATGGTGCCCACCGAATACGGAGAATCGCTGCTCGCCTCCGCGCAACGCGTGCTGCGC
GAAGTCGATTTCGTCGCGACGCCGCATGGCGACTTCGATCCCGGCCGCTCGCGCCGCACCTTTCGCGTCGCCGCGCCGGA
TTATCTGAACGACTTCTTCATGCCTACCGTGATCGCGCAGTTTCGCGAGGCGGCGCCGCACGCGCGGCTCGAAATCGATT
CGCTGAGTCCGATGCTCGATCATTGCGCCGCGCTCGATGCCGGCGAACTCGATCTGGTGATCGGCAACTGGCCGAAGCCC
GAGCCGCGCTTCGAACGCAGCGACCTGTTCTCCGATACCGTGGTGTGCATGATGCGCGCCGATCATCCGTTGACGCGCGT
GCCGCTTACGCGCGAAGCGTATCTCGCCGCGCCGCATCTCGCGCCAACGCCGTATAGCGGCGCGAGCAGCGGCGCCATCG
ACATGGGCTTTGCGCGGGCTCGCGCCGAACGCCGTATCGTCGCCACGCTGCCCTACTTCGGGCTGGTGCCGCAGACGCTG
CTGCAATCCGACCTGATCTTCACGACGACACGCCGTTTCGCGATGCACTACGCGGACATGCTGCCGCTCGCGGTGGTCGA
GGTGCCGATTCCGTTTCCGCGCATCAAGTGCTATCAGCTGTGGCATCCGCAACCGGATAGGCCGAGCGATGTCGGCTGGC
TGCGCGCACTGATGTCCAGGGTGTCGGACGGACTGGTCGCGCAGAAGGTGCGGCGCGCGAAGCGGGCGCCGCAAAAGGAA
AGGTCAGCCGCGACGGGTTGA

Upstream 100 bases:

>100_bases
GCGCCGTGCGCGCCGGCGCCCCGCTCTCCCGAGCCGTCTCGCGGGCGGCGCCGCACGGCGCTTCATCGGATCCGATCCGT
TTGCCCGCCTCGCTCAAATC

Downstream 100 bases:

>100_bases
GCGGGATGACATTCAGGTTTGCAGTTCGGCGGGCGCCGCTTGAGCGCCTCGTGCCGGCTGGCTAATTTCTGCCGTTGTTC
TTCAAACGCTCGCGTAGAGC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MDDTAASLDIWLVRVLRTLLVERSVTQTALRLNQTQPAISTALRKLRETLNDPILVRGKSGMVPTEYGESLLASAQRVLR
EVDFVATPHGDFDPGRSRRTFRVAAPDYLNDFFMPTVIAQFREAAPHARLEIDSLSPMLDHCAALDAGELDLVIGNWPKP
EPRFERSDLFSDTVVCMMRADHPLTRVPLTREAYLAAPHLAPTPYSGASSGAIDMGFARARAERRIVATLPYFGLVPQTL
LQSDLIFTTTRRFAMHYADMLPLAVVEVPIPFPRIKCYQLWHPQPDRPSDVGWLRALMSRVSDGLVAQKVRRAKRAPQKE
RSAATG

Sequences:

>Translated_326_residues
MDDTAASLDIWLVRVLRTLLVERSVTQTALRLNQTQPAISTALRKLRETLNDPILVRGKSGMVPTEYGESLLASAQRVLR
EVDFVATPHGDFDPGRSRRTFRVAAPDYLNDFFMPTVIAQFREAAPHARLEIDSLSPMLDHCAALDAGELDLVIGNWPKP
EPRFERSDLFSDTVVCMMRADHPLTRVPLTREAYLAAPHLAPTPYSGASSGAIDMGFARARAERRIVATLPYFGLVPQTL
LQSDLIFTTTRRFAMHYADMLPLAVVEVPIPFPRIKCYQLWHPQPDRPSDVGWLRALMSRVSDGLVAQKVRRAKRAPQKE
RSAATG
>Mature_326_residues
MDDTAASLDIWLVRVLRTLLVERSVTQTALRLNQTQPAISTALRKLRETLNDPILVRGKSGMVPTEYGESLLASAQRVLR
EVDFVATPHGDFDPGRSRRTFRVAAPDYLNDFFMPTVIAQFREAAPHARLEIDSLSPMLDHCAALDAGELDLVIGNWPKP
EPRFERSDLFSDTVVCMMRADHPLTRVPLTREAYLAAPHLAPTPYSGASSGAIDMGFARARAERRIVATLPYFGLVPQTL
LQSDLIFTTTRRFAMHYADMLPLAVVEVPIPFPRIKCYQLWHPQPDRPSDVGWLRALMSRVSDGLVAQKVRRAKRAPQKE
RSAATG

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=291, Percent_Identity=25.085910652921, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1790147, Length=296, Percent_Identity=25.6756756756757, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI87081766, Length=277, Percent_Identity=23.1046931407942, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI87081904, Length=232, Percent_Identity=28.0172413793103, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 36452; Mature: 36452

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDTAASLDIWLVRVLRTLLVERSVTQTALRLNQTQPAISTALRKLRETLNDPILVRGKS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCC
GMVPTEYGESLLASAQRVLREVDFVATPHGDFDPGRSRRTFRVAAPDYLNDFFMPTVIAQ
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHH
FREAAPHARLEIDSLSPMLDHCAALDAGELDLVIGNWPKPEPRFERSDLFSDTVVCMMRA
HHHHCCCCEEEHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHC
DHPLTRVPLTREAYLAAPHLAPTPYSGASSGAIDMGFARARAERRIVATLPYFGLVPQTL
CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCHHHHHHHH
LQSDLIFTTTRRFAMHYADMLPLAVVEVPIPFPRIKCYQLWHPQPDRPSDVGWLRALMSR
HHCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH
VSDGLVAQKVRRAKRAPQKERSAATG
HHCCHHHHHHHHHHCCCHHHHHCCCC
>Mature Secondary Structure
MDDTAASLDIWLVRVLRTLLVERSVTQTALRLNQTQPAISTALRKLRETLNDPILVRGKS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCC
GMVPTEYGESLLASAQRVLREVDFVATPHGDFDPGRSRRTFRVAAPDYLNDFFMPTVIAQ
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHH
FREAAPHARLEIDSLSPMLDHCAALDAGELDLVIGNWPKPEPRFERSDLFSDTVVCMMRA
HHHHCCCCEEEHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHC
DHPLTRVPLTREAYLAAPHLAPTPYSGASSGAIDMGFARARAERRIVATLPYFGLVPQTL
CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCHHHHHHHH
LQSDLIFTTTRRFAMHYADMLPLAVVEVPIPFPRIKCYQLWHPQPDRPSDVGWLRALMSR
HHCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH
VSDGLVAQKVRRAKRAPQKERSAATG
HHCCHHHHHHHHHHCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]