| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781934
Identifier: 91781934
GI number: 91781934
Start: 618101
End: 618565
Strand: Direct
Name: 91781934
Synonym: Bxe_A3909
Alternate gene names: NA
Gene position: 618101-618565 (Clockwise)
Preceding gene: 91781933
Following gene: 91781938
Centisome position: 12.63
GC content: 63.23
Gene sequence:
>465_bases ATGAAGCCGCATACATCCGCTTTCACGTTGCTCGAATTGATGATCACGCTGGCAATCGCTGCCGCGCTGGCCGTGTTCGC CGTGCCTTCGTACCGCAGCCATGTCGCGCGAACGCATCGAATCGATGCGGCATCCGCGCTCTATCGCGCAGCCCAATTCG TCGAGGGAGCAACGAGCGACAGCGTTCCGGCATTGCCACCGGGCCTCGATCAGGCGCCGCAATTCGGCACGCCTGTCTAT CGCCTGCACGCGCTGCCCGCGGACGACGCCAACGGTGGCTACGCGATAGAGGCAGCGCCGAGTGAATCCGGCCCGATGCG CGACGACCCCTGCGGCATTTTCACGCTCGATGCAACAGGATTACGTGGCAACAGAAGCCGGACAAGCGGTGAGACCGGCG GCCGAGCAAACAGTGGGTCGAACGCATCGACTCCTGCCAGCGGCGATTGCTGGAATACAACCTAG
Upstream 100 bases:
>100_bases GAGTCTCAGGTGTGGTTGCAGATCGAGTTGGTGATAGACGGAGACAAAATTGAACGTCATTGGCGCCACGTTGCCAGCAG GCCTTTTTGACGGAGGCGCC
Downstream 100 bases:
>100_bases CGAACCGGCAGGCCACAAACCGTAGCCCGCAACGGCACCCCGCAACGGCACCCCGCAACGGCACCCCGCAACGGCACCCC GCAACGGCACCCCCCATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Type IV Pilus Biogenesis Protein; Fimbrial Protein
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MKPHTSAFTLLELMITLAIAAALAVFAVPSYRSHVARTHRIDAASALYRAAQFVEGATSDSVPALPPGLDQAPQFGTPVY RLHALPADDANGGYAIEAAPSESGPMRDDPCGIFTLDATGLRGNRSRTSGETGGRANSGSNASTPASGDCWNTT
Sequences:
>Translated_154_residues MKPHTSAFTLLELMITLAIAAALAVFAVPSYRSHVARTHRIDAASALYRAAQFVEGATSDSVPALPPGLDQAPQFGTPVY RLHALPADDANGGYAIEAAPSESGPMRDDPCGIFTLDATGLRGNRSRTSGETGGRANSGSNASTPASGDCWNTT >Mature_154_residues MKPHTSAFTLLELMITLAIAAALAVFAVPSYRSHVARTHRIDAASALYRAAQFVEGATSDSVPALPPGLDQAPQFGTPVY RLHALPADDANGGYAIEAAPSESGPMRDDPCGIFTLDATGLRGNRSRTSGETGGRANSGSNASTPASGDCWNTT
Specific function: Unknown
COG id: COG4968
COG function: function code NU; Tfp pilus assembly protein PilE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15932; Mature: 15932
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPHTSAFTLLELMITLAIAAALAVFAVPSYRSHVARTHRIDAASALYRAAQFVEGATSD CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC SVPALPPGLDQAPQFGTPVYRLHALPADDANGGYAIEAAPSESGPMRDDPCGIFTLDATG CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCC LRGNRSRTSGETGGRANSGSNASTPASGDCWNTT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKPHTSAFTLLELMITLAIAAALAVFAVPSYRSHVARTHRIDAASALYRAAQFVEGATSD CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC SVPALPPGLDQAPQFGTPVYRLHALPADDANGGYAIEAAPSESGPMRDDPCGIFTLDATG CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCC LRGNRSRTSGETGGRANSGSNASTPASGDCWNTT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA