| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is purM [H]
Identifier: 91781909
GI number: 91781909
Start: 591828
End: 592895
Strand: Direct
Name: purM [H]
Synonym: Bxe_A3936
Alternate gene names: 91781909
Gene position: 591828-592895 (Clockwise)
Preceding gene: 91781908
Following gene: 91781912
Centisome position: 12.09
GC content: 64.04
Gene sequence:
>1068_bases ATGAATCAACCGAAATCCGCCCCGAATTCAACTGATTCGGCCCAAGGTTTGTCGTATCGCGACGCCGGCGTGGACATCGA CGCGGGCGACGCCCTTGTCGACGCAATCAAGCCGTTTGCCAGAAAGACGATGCGCGACGGCGTGCTGGGTGGCATCGGCG GGTTTGGCGCGCTGTTCGAAGTGCCGAAGAAGTACAAGGAGCCGGTGCTGGTGTCCGGCACCGACGGCGTCGGCACCAAG CTGCGTCTCGCCTTTCAGCTGAACAAACACGACACCGTGGGCCAGGATCTGGTGGCGATGAGCGTGAACGACATTCTCGT GCAGGGCGCGGAGCCGCTGTTCTTCCTGGACTACTTCGCCTGCGGCAAGCTGGACGTCGGCACGGCGGCCACGGTCGTGA AGGGTATCGCATACGGCTGCGAACTGTCGGGTTGCGCGTTGATCGGCGGCGAGACGGCGGAAATGCCGGGCATGTACCCG GACGGCGAATACGATCTGGCGGGTTTCGCGGTCGGCGCGGTGGAAAAGAGCAAGATTATCGACGGCAGCACGATCGCCCC CGGCGACGTGGTGCTGGGCCTGGCTTCGAGCGGCATTCATTCGAACGGGTTTTCGCTGGTGCGCAAGATCATCGAGCGTG CGCAGCCTGATCTGAACGCGGACTTCGACGGCCGCTCGCTTGCCGACGCGTTGATGGCGCCCACGCATATCTATGTGAAG CCGCTGCTGGCGCTGATGCAGCAGATCGCCGTGAAGGGCATGGCGCACATCACGGGCGGCGGGCTGGTCGAGAACATTCC GCGCGTGTTGCGTGAAGGCCTGACGGCTGAGCTGGATCATCGCGGCTGGCCGTTGCCGCCGCTGTTCTCGTGGCTGCAAA AGCACGGCGGCGTGGCGGACGCGGAAATGCACCGCGTGTTCAACTGCGGTATCGGCATGGCCGTGGTGGTGTCGGCCGCG GATGCCGATGCGGCAATCGGTCTGCTGTCCGCAGCCGGCGAGCAGGTCTGGAAGATCGGCGTGATTCGCGAAAGTGCGGC CGGTGAGGCTCAGACCGTAGTGATCTAA
Upstream 100 bases:
>100_bases TAAAATCCTGAGGTCGTTCGAAGCGTAAGTACCTGTTTTAATTGCGATTTTCTACTTTTCCCAGTATCATCTCATTTTAC CGACCTTCGAGCTCGTCCTC
Downstream 100 bases:
>100_bases AAGCTTGTCAGACCGCGCGGCGTGCGGTTAGCCGGCGCCGCGCGGGTTTGAAGCTTCAACGCATCAGAGTTTCAAAGCGT CAAAGTTTCAAAGCAACGCT
Product: phosphoribosylaminoimidazole synthetase
Products: NA
Alternate protein names: AIR synthase; AIRS; Phosphoribosyl-aminoimidazole synthetase [H]
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MNQPKSAPNSTDSAQGLSYRDAGVDIDAGDALVDAIKPFARKTMRDGVLGGIGGFGALFEVPKKYKEPVLVSGTDGVGTK LRLAFQLNKHDTVGQDLVAMSVNDILVQGAEPLFFLDYFACGKLDVGTAATVVKGIAYGCELSGCALIGGETAEMPGMYP DGEYDLAGFAVGAVEKSKIIDGSTIAPGDVVLGLASSGIHSNGFSLVRKIIERAQPDLNADFDGRSLADALMAPTHIYVK PLLALMQQIAVKGMAHITGGGLVENIPRVLREGLTAELDHRGWPLPPLFSWLQKHGGVADAEMHRVFNCGIGMAVVVSAA DADAAIGLLSAAGEQVWKIGVIRESAAGEAQTVVI
Sequences:
>Translated_355_residues MNQPKSAPNSTDSAQGLSYRDAGVDIDAGDALVDAIKPFARKTMRDGVLGGIGGFGALFEVPKKYKEPVLVSGTDGVGTK LRLAFQLNKHDTVGQDLVAMSVNDILVQGAEPLFFLDYFACGKLDVGTAATVVKGIAYGCELSGCALIGGETAEMPGMYP DGEYDLAGFAVGAVEKSKIIDGSTIAPGDVVLGLASSGIHSNGFSLVRKIIERAQPDLNADFDGRSLADALMAPTHIYVK PLLALMQQIAVKGMAHITGGGLVENIPRVLREGLTAELDHRGWPLPPLFSWLQKHGGVADAEMHRVFNCGIGMAVVVSAA DADAAIGLLSAAGEQVWKIGVIRESAAGEAQTVVI >Mature_355_residues MNQPKSAPNSTDSAQGLSYRDAGVDIDAGDALVDAIKPFARKTMRDGVLGGIGGFGALFEVPKKYKEPVLVSGTDGVGTK LRLAFQLNKHDTVGQDLVAMSVNDILVQGAEPLFFLDYFACGKLDVGTAATVVKGIAYGCELSGCALIGGETAEMPGMYP DGEYDLAGFAVGAVEKSKIIDGSTIAPGDVVLGLASSGIHSNGFSLVRKIIERAQPDLNADFDGRSLADALMAPTHIYVK PLLALMQQIAVKGMAHITGGGLVENIPRVLREGLTAELDHRGWPLPPLFSWLQKHGGVADAEMHRVFNCGIGMAVVVSAA DADAAIGLLSAAGEQVWKIGVIRESAAGEAQTVVI
Specific function: De novo purine biosynthesis; fifth step. [C]
COG id: COG0150
COG function: function code F; Phosphoribosylaminoimidazole (AIR) synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR synthase family [H]
Homologues:
Organism=Homo sapiens, GI4503915, Length=363, Percent_Identity=51.5151515151515, Blast_Score=358, Evalue=5e-99, Organism=Homo sapiens, GI209869995, Length=363, Percent_Identity=51.5151515151515, Blast_Score=358, Evalue=5e-99, Organism=Homo sapiens, GI209869993, Length=363, Percent_Identity=51.5151515151515, Blast_Score=358, Evalue=5e-99, Organism=Escherichia coli, GI1788845, Length=340, Percent_Identity=60.2941176470588, Blast_Score=412, Evalue=1e-116, Organism=Caenorhabditis elegans, GI17567511, Length=343, Percent_Identity=43.731778425656, Blast_Score=254, Evalue=5e-68, Organism=Saccharomyces cerevisiae, GI6321203, Length=344, Percent_Identity=48.8372093023256, Blast_Score=322, Evalue=8e-89, Organism=Drosophila melanogaster, GI24582400, Length=317, Percent_Identity=45.7413249211356, Blast_Score=247, Evalue=7e-66,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR004733 - InterPro: IPR016188 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =6.3.3.1 [H]
Molecular weight: Translated: 37015; Mature: 37015
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQPKSAPNSTDSAQGLSYRDAGVDIDAGDALVDAIKPFARKTMRDGVLGGIGGFGALFE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH VPKKYKEPVLVSGTDGVGTKLRLAFQLNKHDTVGQDLVAMSVNDILVQGAEPLFFLDYFA HHHHHCCCEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHH CGKLDVGTAATVVKGIAYGCELSGCALIGGETAEMPGMYPDGEYDLAGFAVGAVEKSKII CCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCHHHHCC DGSTIAPGDVVLGLASSGIHSNGFSLVRKIIERAQPDLNADFDGRSLADALMAPTHIYVK CCCCCCCCHHEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHH PLLALMQQIAVKGMAHITGGGLVENIPRVLREGLTAELDHRGWPLPPLFSWLQKHGGVAD HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHCCCCH AEMHRVFNCGIGMAVVVSAADADAAIGLLSAAGEQVWKIGVIRESAAGEAQTVVI HHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCHHHEEEEEEECCCCCCCEEEEC >Mature Secondary Structure MNQPKSAPNSTDSAQGLSYRDAGVDIDAGDALVDAIKPFARKTMRDGVLGGIGGFGALFE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH VPKKYKEPVLVSGTDGVGTKLRLAFQLNKHDTVGQDLVAMSVNDILVQGAEPLFFLDYFA HHHHHCCCEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHH CGKLDVGTAATVVKGIAYGCELSGCALIGGETAEMPGMYPDGEYDLAGFAVGAVEKSKII CCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCHHHHCC DGSTIAPGDVVLGLASSGIHSNGFSLVRKIIERAQPDLNADFDGRSLADALMAPTHIYVK CCCCCCCCHHEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHH PLLALMQQIAVKGMAHITGGGLVENIPRVLREGLTAELDHRGWPLPPLFSWLQKHGGVAD HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHCCCCH AEMHRVFNCGIGMAVVVSAADADAAIGLLSAAGEQVWKIGVIRESAAGEAQTVVI HHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCHHHEEEEEEECCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA