| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781883
Identifier: 91781883
GI number: 91781883
Start: 564497
End: 564943
Strand: Direct
Name: 91781883
Synonym: Bxe_A3962
Alternate gene names: NA
Gene position: 564497-564943 (Clockwise)
Preceding gene: 91781882
Following gene: 91781884
Centisome position: 11.53
GC content: 63.98
Gene sequence:
>447_bases ATGGCCAACATTCCCGTCGACTCCACCGCGTTCGCGGTGTTCGGCATGCAGGAGTTGAGCGCCGCGTCATTCGACGCCGC GCTCGCCGAAGCAGGGGATGAACTGGCCGTGGTGTTTTTCTGGGGTCTCGACTGCTTCAACTGCGAGATCGCCAAGAAGG CCATGCTGGCGCAGCCGGACGCGATTCGCGCACTCGGCCTCAAATGGTTTCACAGCAACGTTTACGAGCATCGCGAACTG GGCCGGCGCTTCATGCTGCATGGCGTGCCCACATGGTTCTTCTTTTATCGCGGCAAGCGGCTCGGCCGGGCAACCGGCTG GCACGGCCTCGGGCAATTCCAGGCCGCGGTCGCGGCCGCGCGGGAGAAGATCCGGGCAGGCAATGCAGCAAATGCTGCCG GTGGGCACATTGAGGCGGCAGATTCGGGCGGAAGTTCGCCCGATTGA
Upstream 100 bases:
>100_bases GATCGCGGATCGGGTGCTGCGTCCGGCACTCGTGACCGTCGCGGCCCCGAAGTAAGCGCCGCCGGTCTTTCGTAAGCCGT TTCGTCCGGCAGGCGCCGTC
Downstream 100 bases:
>100_bases AAAAAATTAAAGACCGCATCGCAAAAGAGGTCTTGAAAACGATGCGGACGCACTTATGTTGAGTGCAGGTTAGGAATTGA GAGCGGATCGCCTTACCGCC
Product: putative thioredoxin protein
Products: NA
Alternate protein names: Thioredoxin; Thioredoxin Family Protein; Thiol-Disulfide Isomerase And Thioredoxin; Thioredoxin Family
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MANIPVDSTAFAVFGMQELSAASFDAALAEAGDELAVVFFWGLDCFNCEIAKKAMLAQPDAIRALGLKWFHSNVYEHREL GRRFMLHGVPTWFFFYRGKRLGRATGWHGLGQFQAAVAAAREKIRAGNAANAAGGHIEAADSGGSSPD
Sequences:
>Translated_148_residues MANIPVDSTAFAVFGMQELSAASFDAALAEAGDELAVVFFWGLDCFNCEIAKKAMLAQPDAIRALGLKWFHSNVYEHREL GRRFMLHGVPTWFFFYRGKRLGRATGWHGLGQFQAAVAAAREKIRAGNAANAAGGHIEAADSGGSSPD >Mature_147_residues ANIPVDSTAFAVFGMQELSAASFDAALAEAGDELAVVFFWGLDCFNCEIAKKAMLAQPDAIRALGLKWFHSNVYEHRELG RRFMLHGVPTWFFFYRGKRLGRATGWHGLGQFQAAVAAAREKIRAGNAANAAGGHIEAADSGGSSPD
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15949; Mature: 15818
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANIPVDSTAFAVFGMQELSAASFDAALAEAGDELAVVFFWGLDCFNCEIAKKAMLAQPD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCH AIRALGLKWFHSNVYEHRELGRRFMLHGVPTWFFFYRGKRLGRATGWHGLGQFQAAVAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHH REKIRAGNAANAAGGHIEAADSGGSSPD HHHHHCCCCCCCCCCEEEECCCCCCCCC >Mature Secondary Structure ANIPVDSTAFAVFGMQELSAASFDAALAEAGDELAVVFFWGLDCFNCEIAKKAMLAQPD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCH AIRALGLKWFHSNVYEHRELGRRFMLHGVPTWFFFYRGKRLGRATGWHGLGQFQAAVAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHH REKIRAGNAANAAGGHIEAADSGGSSPD HHHHHCCCCCCCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA