| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is hemH [H]
Identifier: 91781880
GI number: 91781880
Start: 561861
End: 562931
Strand: Direct
Name: hemH [H]
Synonym: Bxe_A3965
Alternate gene names: 91781880
Gene position: 561861-562931 (Clockwise)
Preceding gene: 91781879
Following gene: 91781881
Centisome position: 11.48
GC content: 63.87
Gene sequence:
>1071_bases ATGCGCTTCGACCTCGAGCGGCCTTCACAGAACGCCACGTCACACCGTGTCGCCGTGCTGCTGATCAATCTCGGCACGCC CGACGCGCCGACGCCGCGCGCGGTCCGCCGCTATCTCGCGCAGTTTCTGTCCGATCCGCGCGTGGTCGAAATTCCGGCGC TGCTCTGGCAGATCATCTTGCGTCTGCTGATCCTGCCGTTCCGGGGCAGTGCCTCGGCCAAGAAGTACGCTGCGGTGTGG ATGCCCGAAGGCTCGCCGCTGCGCGTGTATACAGAGAAGCAGGTGGAGGGCTTGCGCCATCTGCTGCAACTGAACGACTA CACGGTGCTGGTCGATTACGCGATGCGCTACGGTACGCCGGGTATTCCGGCCATGCTGAACCAGCTCAAGCTGGCAGGCG CCGAACGCGTGCTGCTCATGCCCATGTATCCGCAGTATTCGTCGTCCACCACCGCCACCGCTTTCGACGACGCCTTTTCG GCGCTCAAGCGCATGCGCAATCAGCCGGAAATTCGCACGGTGCGCCAGTACGCCGATCATCCGGCCTACATTGCGGCGCT TGCCGCACAGGTGCATCAATATTGGCATCAGCATGGCCGGCCGGATTTCGCCGCGGGCGACAAGCTGGTGCTGAGTTTTC ACGGCGTGCCCAAACGCACGCTGGATCTCGGCGACCCATACCATGAGCAATGCCAGCAAACGGGCGCGCTGCTGATGCAG GCGCTCGAACTGACGCCGGTGGAGTGCCGCATTACGTTCCAGTCGCGTTTCGGCAAGGCCGAGTGGCTGCAGCCGTATAC GGCGCCCACGCTCAAGGAACTGGGCGCGGCGGGCGTGCGGCGCGCCGATGTGTTCTGTCCGGGCTTTACTGCCGACTGCC TTGAGACCATCGAGGAAATCGGCATGGAAGTGCGCGATGAATTCCTGCACGCGGGCGGCAAGGATTTTCATCGGATTCCC TGCCTGAATGCGTCGCAGGCCTGGATTGCCGCGCTGGGCGAAATCGTCGCGCAGAATCTCCAGGGCTGGCCGGTGCAGGC GCTGCCGGTGCCGCATACGACAGGAGCTTGA
Upstream 100 bases:
>100_bases AATGGCCAGGGGTGTCCGGCGGACCGGTGCATGCACCACGCCGCTATAATGGTTCTCACCTGAACCGACACTCCGCCTGA GCGGGTTACCTCTGCTGCCT
Downstream 100 bases:
>100_bases ACAGGCTCATGAATTACGGGATCTCAACCGAAGCGGGCGCGAAACTGCGCATCGACAAATGGCTTTGGGCCGCGCGCTTT TTCAAGACGCGTTCGCTCGC
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MRFDLERPSQNATSHRVAVLLINLGTPDAPTPRAVRRYLAQFLSDPRVVEIPALLWQIILRLLILPFRGSASAKKYAAVW MPEGSPLRVYTEKQVEGLRHLLQLNDYTVLVDYAMRYGTPGIPAMLNQLKLAGAERVLLMPMYPQYSSSTTATAFDDAFS ALKRMRNQPEIRTVRQYADHPAYIAALAAQVHQYWHQHGRPDFAAGDKLVLSFHGVPKRTLDLGDPYHEQCQQTGALLMQ ALELTPVECRITFQSRFGKAEWLQPYTAPTLKELGAAGVRRADVFCPGFTADCLETIEEIGMEVRDEFLHAGGKDFHRIP CLNASQAWIAALGEIVAQNLQGWPVQALPVPHTTGA
Sequences:
>Translated_356_residues MRFDLERPSQNATSHRVAVLLINLGTPDAPTPRAVRRYLAQFLSDPRVVEIPALLWQIILRLLILPFRGSASAKKYAAVW MPEGSPLRVYTEKQVEGLRHLLQLNDYTVLVDYAMRYGTPGIPAMLNQLKLAGAERVLLMPMYPQYSSSTTATAFDDAFS ALKRMRNQPEIRTVRQYADHPAYIAALAAQVHQYWHQHGRPDFAAGDKLVLSFHGVPKRTLDLGDPYHEQCQQTGALLMQ ALELTPVECRITFQSRFGKAEWLQPYTAPTLKELGAAGVRRADVFCPGFTADCLETIEEIGMEVRDEFLHAGGKDFHRIP CLNASQAWIAALGEIVAQNLQGWPVQALPVPHTTGA >Mature_356_residues MRFDLERPSQNATSHRVAVLLINLGTPDAPTPRAVRRYLAQFLSDPRVVEIPALLWQIILRLLILPFRGSASAKKYAAVW MPEGSPLRVYTEKQVEGLRHLLQLNDYTVLVDYAMRYGTPGIPAMLNQLKLAGAERVLLMPMYPQYSSSTTATAFDDAFS ALKRMRNQPEIRTVRQYADHPAYIAALAAQVHQYWHQHGRPDFAAGDKLVLSFHGVPKRTLDLGDPYHEQCQQTGALLMQ ALELTPVECRITFQSRFGKAEWLQPYTAPTLKELGAAGVRRADVFCPGFTADCLETIEEIGMEVRDEFLHAGGKDFHRIP CLNASQAWIAALGEIVAQNLQGWPVQALPVPHTTGA
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499025, Length=266, Percent_Identity=26.6917293233083, Blast_Score=96, Evalue=6e-20, Organism=Homo sapiens, GI60499021, Length=266, Percent_Identity=26.6917293233083, Blast_Score=96, Evalue=6e-20, Organism=Escherichia coli, GI1786681, Length=322, Percent_Identity=45.9627329192547, Blast_Score=273, Evalue=1e-74, Organism=Saccharomyces cerevisiae, GI6324750, Length=354, Percent_Identity=25.4237288135593, Blast_Score=91, Evalue=2e-19, Organism=Drosophila melanogaster, GI17864156, Length=337, Percent_Identity=24.3323442136499, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI24651774, Length=265, Percent_Identity=24.5283018867925, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 39782; Mature: 39782
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFDLERPSQNATSHRVAVLLINLGTPDAPTPRAVRRYLAQFLSDPRVVEIPALLWQIIL CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHH RLLILPFRGSASAKKYAAVWMPEGSPLRVYTEKQVEGLRHLLQLNDYTVLVDYAMRYGTP HHHHCCCCCCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEHHHHHCCCC GIPAMLNQLKLAGAERVLLMPMYPQYSSSTTATAFDDAFSALKRMRNQPEIRTVRQYADH CHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCC PAYIAALAAQVHQYWHQHGRPDFAAGDKLVLSFHGVPKRTLDLGDPYHEQCQQTGALLMQ HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH ALELTPVECRITFQSRFGKAEWLQPYTAPTLKELGAAGVRRADVFCPGFTADCLETIEEI HHHCCCEEEEEEEHHHCCCHHHCCCCCCHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHH GMEVRDEFLHAGGKDFHRIPCLNASQAWIAALGEIVAQNLQGWPVQALPVPHTTGA HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCC >Mature Secondary Structure MRFDLERPSQNATSHRVAVLLINLGTPDAPTPRAVRRYLAQFLSDPRVVEIPALLWQIIL CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHH RLLILPFRGSASAKKYAAVWMPEGSPLRVYTEKQVEGLRHLLQLNDYTVLVDYAMRYGTP HHHHCCCCCCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEHHHHHCCCC GIPAMLNQLKLAGAERVLLMPMYPQYSSSTTATAFDDAFSALKRMRNQPEIRTVRQYADH CHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCC PAYIAALAAQVHQYWHQHGRPDFAAGDKLVLSFHGVPKRTLDLGDPYHEQCQQTGALLMQ HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH ALELTPVECRITFQSRFGKAEWLQPYTAPTLKELGAAGVRRADVFCPGFTADCLETIEEI HHHCCCEEEEEEEHHHCCCHHHCCCCCCHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHH GMEVRDEFLHAGGKDFHRIPCLNASQAWIAALGEIVAQNLQGWPVQALPVPHTTGA HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA