| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is katA [H]
Identifier: 91781859
GI number: 91781859
Start: 534087
End: 535541
Strand: Direct
Name: katA [H]
Synonym: Bxe_A3986
Alternate gene names: 91781859
Gene position: 534087-535541 (Clockwise)
Preceding gene: 91781858
Following gene: 91781860
Centisome position: 10.91
GC content: 61.92
Gene sequence:
>1455_bases ATGTCCGAACACAAGCTCACCAATGCCGCCGGCGCACCCGTCGCCGACAACCAGAATTCGATGACCGCCGGCGCGCGCGG TCCGGTCGTCCTGCAAGACGTCTGGCTGCTCGAAAAACTCGCTCACTTCGACCGCGAAGTGATTCCGGAACGCCGCGTTC ACGCCAAAGGTTCGGGCGCGTTCGGCACGCTGAAGGTCACGCACGATATCTCGCGCTACACGAAGGCGAAGGTGTTCGCG CAAGCCGGCAAGGAAACGCCGCTTTTCATGCGCTTTTCGACGGTTGCCGGCGAGCGCGGCGCGGCCGACGCCGAACGCGA CGTGCGCGGCTTCTCGATCAAGTTCTACACGGAAGAGGGCAACTGGGACGTGGTGGGCAACAACACGCCGGTGTTCTTTA TCCGCGATCCGCTGAAGTTTCCGGACTTCATCCACACGCAAAAGCGCGACCCGTACACCAACATGCGCAGCAATGTGGCC GCGTGGGATTTCTGGTCGCGTCATCCGGAGTCGCTGCATCAGGTGACGATTCTGATGAGCGACCGCGGGATTCCGCAGAA TTTCCGTCAGATGCACGGCTTCGGCTCGCACACGTACTCGTTCATCAACGCCAACAACGAGCGTTTCTGGGTGAAGTTCC ACTTCAAGTCGATGCAAGGCGTCGAGAACTTTACCGATGCAGAAGCCGCACAGGTGGTCGCGCAGGATCGTGAAAGCGCG CAACGCGATCTGCTCACGAACATCGACCAGGGCAACTTCCCGAAATGGCGCTTCGCCATTCAGGTGATGCCGGAAGCGGA AGCCGCCACGTATCGCTTCAATCCGTTCGACATCACGAAAGTGTGGTCGCAGAAGGACTATCCGCTGATCGATGTCGGCA CGATCGAGTTGAATCGCAATGCCGCCAACTATTTCGCGGACGTGGAGCAGGCGGCGTTCACGCCGGCCAACGTGGTGCCG GGCATCGGTTTCTCGCCGGATCGTCTGTTGCAGGGGCGTCTGTTCTCGTATGGCGACACGCAGCGCTATCGCCTCGGCGT GAATCACCACCAGATTCCGGTGAACGCCTCGCGTGTGGCGAGCCCGCATTCGTTTCATCGCGACGGCGCGATGCGCACGG ACGGCAACCTCGGCGGCAACGTGAATTACGAGCCGAACCGCTTCGGCGACTTCGCGCAGGACGCCAACGCGTCCGAACCG CCGCTCGCGGCGGGCGCGGTGGATCGCTACGATCATCGTCTGGACGACGACTACTACACGCAGCCGGGCATGCTGTTTGC GCTCTTCGATGCGGCCCAGCGCGAGCGTCTGTTCGGCAACATCGCACGCCATATCAACGGTGTGCCGCAGGAGATCGTCG CGCGTCAGATCGAGCATTTCCGCCGCGCCGATCCGGCATACGCGGAAGGCGTGATCGCAGCGATTGCCAGGCTCGCGGAA GGCGAGACGAAGTAA
Upstream 100 bases:
>100_bases TGTCCGCATGACGCATCACGCTTGACGCGTGAGCCTCTGGCATCAGTGCACAGCGCCTCTTCCACACTCTGTTTCGATAA AAGCCATCCAGGAGTCACGC
Downstream 100 bases:
>100_bases GCGCATCGAGCAGTTGAAGCGATGCAGCAACGCGGGACGCATCTGCGTCCCGCCGGTATCGATACGAACCGAAGGAGCAC GATCATGATGCAGATGATGA
Product: catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MSEHKLTNAAGAPVADNQNSMTAGARGPVVLQDVWLLEKLAHFDREVIPERRVHAKGSGAFGTLKVTHDISRYTKAKVFA QAGKETPLFMRFSTVAGERGAADAERDVRGFSIKFYTEEGNWDVVGNNTPVFFIRDPLKFPDFIHTQKRDPYTNMRSNVA AWDFWSRHPESLHQVTILMSDRGIPQNFRQMHGFGSHTYSFINANNERFWVKFHFKSMQGVENFTDAEAAQVVAQDRESA QRDLLTNIDQGNFPKWRFAIQVMPEAEAATYRFNPFDITKVWSQKDYPLIDVGTIELNRNAANYFADVEQAAFTPANVVP GIGFSPDRLLQGRLFSYGDTQRYRLGVNHHQIPVNASRVASPHSFHRDGAMRTDGNLGGNVNYEPNRFGDFAQDANASEP PLAAGAVDRYDHRLDDDYYTQPGMLFALFDAAQRERLFGNIARHINGVPQEIVARQIEHFRRADPAYAEGVIAAIARLAE GETK
Sequences:
>Translated_484_residues MSEHKLTNAAGAPVADNQNSMTAGARGPVVLQDVWLLEKLAHFDREVIPERRVHAKGSGAFGTLKVTHDISRYTKAKVFA QAGKETPLFMRFSTVAGERGAADAERDVRGFSIKFYTEEGNWDVVGNNTPVFFIRDPLKFPDFIHTQKRDPYTNMRSNVA AWDFWSRHPESLHQVTILMSDRGIPQNFRQMHGFGSHTYSFINANNERFWVKFHFKSMQGVENFTDAEAAQVVAQDRESA QRDLLTNIDQGNFPKWRFAIQVMPEAEAATYRFNPFDITKVWSQKDYPLIDVGTIELNRNAANYFADVEQAAFTPANVVP GIGFSPDRLLQGRLFSYGDTQRYRLGVNHHQIPVNASRVASPHSFHRDGAMRTDGNLGGNVNYEPNRFGDFAQDANASEP PLAAGAVDRYDHRLDDDYYTQPGMLFALFDAAQRERLFGNIARHINGVPQEIVARQIEHFRRADPAYAEGVIAAIARLAE GETK >Mature_483_residues SEHKLTNAAGAPVADNQNSMTAGARGPVVLQDVWLLEKLAHFDREVIPERRVHAKGSGAFGTLKVTHDISRYTKAKVFAQ AGKETPLFMRFSTVAGERGAADAERDVRGFSIKFYTEEGNWDVVGNNTPVFFIRDPLKFPDFIHTQKRDPYTNMRSNVAA WDFWSRHPESLHQVTILMSDRGIPQNFRQMHGFGSHTYSFINANNERFWVKFHFKSMQGVENFTDAEAAQVVAQDRESAQ RDLLTNIDQGNFPKWRFAIQVMPEAEAATYRFNPFDITKVWSQKDYPLIDVGTIELNRNAANYFADVEQAAFTPANVVPG IGFSPDRLLQGRLFSYGDTQRYRLGVNHHQIPVNASRVASPHSFHRDGAMRTDGNLGGNVNYEPNRFGDFAQDANASEPP LAAGAVDRYDHRLDDDYYTQPGMLFALFDAAQRERLFGNIARHINGVPQEIVARQIEHFRRADPAYAEGVIAAIARLAEG ETK
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=473, Percent_Identity=51.1627906976744, Blast_Score=496, Evalue=1e-140, Organism=Escherichia coli, GI48994891, Length=393, Percent_Identity=46.8193384223919, Blast_Score=348, Evalue=4e-97, Organism=Caenorhabditis elegans, GI71998444, Length=477, Percent_Identity=50.7337526205451, Blast_Score=488, Evalue=1e-138, Organism=Caenorhabditis elegans, GI25151141, Length=470, Percent_Identity=50, Blast_Score=480, Evalue=1e-136, Organism=Caenorhabditis elegans, GI25147792, Length=468, Percent_Identity=50, Blast_Score=478, Evalue=1e-135, Organism=Saccharomyces cerevisiae, GI6320462, Length=499, Percent_Identity=44.4889779559118, Blast_Score=381, Evalue=1e-106, Organism=Saccharomyces cerevisiae, GI6321525, Length=395, Percent_Identity=42.0253164556962, Blast_Score=310, Evalue=3e-85, Organism=Drosophila melanogaster, GI17981717, Length=467, Percent_Identity=49.2505353319058, Blast_Score=464, Evalue=1e-131, Organism=Drosophila melanogaster, GI19920968, Length=463, Percent_Identity=45.1403887688985, Blast_Score=431, Evalue=1e-121,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 54558; Mature: 54427
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHKLTNAAGAPVADNQNSMTAGARGPVVLQDVWLLEKLAHFDREVIPERRVHAKGSGA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCC FGTLKVTHDISRYTKAKVFAQAGKETPLFMRFSTVAGERGAADAERDVRGFSIKFYTEEG EEEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCCCCHHCCCEEEEEEEEECC NWDVVGNNTPVFFIRDPLKFPDFIHTQKRDPYTNMRSNVAAWDFWSRHPESLHQVTILMS CEEEECCCCCEEEEECCCCCCHHHHCCCCCCCHHHHCCCEEEHHHHCCCCCCEEEEEEEE DRGIPQNFRQMHGFGSHTYSFINANNERFWVKFHFKSMQGVENFTDAEAAQVVAQDRESA CCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH QRDLLTNIDQGNFPKWRFAIQVMPEAEAATYRFNPFDITKVWSQKDYPLIDVGTIELNRN HHHHHHCCCCCCCCCEEEEEEEECCCCCCEEECCCCCHHHHHCCCCCCEEEEEEEEECCC AANYFADVEQAAFTPANVVPGIGFSPDRLLQGRLFSYGDTQRYRLGVNHHQIPVNASRVA HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCHHHCCCCCCEEEECCCCCCCCCCHHHCC SPHSFHRDGAMRTDGNLGGNVNYEPNRFGDFAQDANASEPPLAAGAVDRYDHRLDDDYYT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCC QPGMLFALFDAAQRERLFGNIARHINGVPQEIVARQIEHFRRADPAYAEGVIAAIARLAE CCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC GETK CCCC >Mature Secondary Structure SEHKLTNAAGAPVADNQNSMTAGARGPVVLQDVWLLEKLAHFDREVIPERRVHAKGSGA CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCC FGTLKVTHDISRYTKAKVFAQAGKETPLFMRFSTVAGERGAADAERDVRGFSIKFYTEEG EEEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCCCCHHCCCEEEEEEEEECC NWDVVGNNTPVFFIRDPLKFPDFIHTQKRDPYTNMRSNVAAWDFWSRHPESLHQVTILMS CEEEECCCCCEEEEECCCCCCHHHHCCCCCCCHHHHCCCEEEHHHHCCCCCCEEEEEEEE DRGIPQNFRQMHGFGSHTYSFINANNERFWVKFHFKSMQGVENFTDAEAAQVVAQDRESA CCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH QRDLLTNIDQGNFPKWRFAIQVMPEAEAATYRFNPFDITKVWSQKDYPLIDVGTIELNRN HHHHHHCCCCCCCCCEEEEEEEECCCCCCEEECCCCCHHHHHCCCCCCEEEEEEEEECCC AANYFADVEQAAFTPANVVPGIGFSPDRLLQGRLFSYGDTQRYRLGVNHHQIPVNASRVA HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCHHHCCCCCCEEEECCCCCCCCCCHHHCC SPHSFHRDGAMRTDGNLGGNVNYEPNRFGDFAQDANASEPPLAAGAVDRYDHRLDDDYYT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCC QPGMLFALFDAAQRERLFGNIARHINGVPQEIVARQIEHFRRADPAYAEGVIAAIARLAE CCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC GETK CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12910271 [H]