Click here to switch to the map view.

The map label for this gene is oxyR [H]

Identifier: 91781858

GI number: 91781858

Start: 532717

End: 533676

Strand: Direct

Name: oxyR [H]

Synonym: Bxe_A3987

Alternate gene names: 91781858

Gene position: 532717-533676 (Clockwise)

Preceding gene: 91781857

Following gene: 91781859

Centisome position: 10.88

GC content: 62.4

Gene sequence:

>960_bases
ATGACCCTCACCGAACTGAAATACATCGTCGCGGTTGCCCGCGAGCGGCACTTCGGCCGGGCCGCCGAAGCGTGTTTCGT
CAGCCAGCCGACCTTGTCGGTGGCCATCAAGAAGCTCGAAGACGAGCTCAACGTCCAGATCTTCGAGCGCGGCACCAGCG
AAGTGAGCGTCACGCCGATCGGCGAACAGATCGTCACGCAAGCTCAACGTGTCCTCGAACAGACGCTCGCCATCAAGGAA
ATCGCCAAACAGGGCAAAGACCCGCTGGTCGGGCCGCTGCGCCTCGGCGTCATCTACACGATCGGGCCGTACCTGCTGCC
CACGCTCGTCAAGCAGATGATCAAGCGCGTCCCGCAAATGCCCTTGATGCTGCAGGAAAATTACACGCTCAAGCTGATCG
AACTGCTCAAACAAGGCGAAATCGACGTCGCCATCATGGCGCTCCCGTTTCCGGAAACCGGCCTGATGCTGCGCCCGCTG
TACGACGAACCCTTCGTGGTCGCGCTGCCGTCCGGTCATGCCTGGGAAAACCGCCAGAAGATCGACGCCGACGATCTGAA
GCAGGAAACCATGTTGCTGCTCGGCAGCGGCCACTGTTTCCGTGATCACGTGCTGGGCGTCTGTCCGGAACTGATGCGCT
TTTCGCAAAACGCGGACGGCATCCAGAAGACCTTCGAGGGCTCGTCGCTGGAAACCATTCGCCACATGGTGGCGAGCGGT
GTCGGCATTACCGTGCTGCCGCGCATGTCGGTGCACGAAGTCAAGCCGCATGCCGGCGGCATCGACGCCGGGCTGCTCAG
CTACGTCGCTTTCGACGAACCCGTGCCGGATCGCCGCGTCGTGCTGGCCTGGCGCAAGAGCTTCACGCGCATGCCCGCTA
TCGACGCCATTTGCGACGCCATCAACGCCTGCGATCTGCCGGGCGTCAGGAAGCTCGACTTGCCCGTCGCCGTCAACTGA

Upstream 100 bases:

>100_bases
GCACACCCAGAGGCCCCCCACTCCCCCAAAAAGTTGGCGAACCGACCCTATAGGTGTATAACTAGAACCTATCAAACTCA
CCGCACTGATTGGTCCCCCA

Downstream 100 bases:

>100_bases
CGGCCGCGCCCGCATCCGGCCGGTTCGCCGCGCATCGCCAGGCGGCAACCGGTCCGAGGCCATCCGGGCGTCGATAGCCG
CCATCCCTATCGAATAGATA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MTLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELNVQIFERGTSEVSVTPIGEQIVTQAQRVLEQTLAIKE
IAKQGKDPLVGPLRLGVIYTIGPYLLPTLVKQMIKRVPQMPLMLQENYTLKLIELLKQGEIDVAIMALPFPETGLMLRPL
YDEPFVVALPSGHAWENRQKIDADDLKQETMLLLGSGHCFRDHVLGVCPELMRFSQNADGIQKTFEGSSLETIRHMVASG
VGITVLPRMSVHEVKPHAGGIDAGLLSYVAFDEPVPDRRVVLAWRKSFTRMPAIDAICDAINACDLPGVRKLDLPVAVN

Sequences:

>Translated_319_residues
MTLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELNVQIFERGTSEVSVTPIGEQIVTQAQRVLEQTLAIKE
IAKQGKDPLVGPLRLGVIYTIGPYLLPTLVKQMIKRVPQMPLMLQENYTLKLIELLKQGEIDVAIMALPFPETGLMLRPL
YDEPFVVALPSGHAWENRQKIDADDLKQETMLLLGSGHCFRDHVLGVCPELMRFSQNADGIQKTFEGSSLETIRHMVASG
VGITVLPRMSVHEVKPHAGGIDAGLLSYVAFDEPVPDRRVVLAWRKSFTRMPAIDAICDAINACDLPGVRKLDLPVAVN
>Mature_318_residues
TLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELNVQIFERGTSEVSVTPIGEQIVTQAQRVLEQTLAIKEI
AKQGKDPLVGPLRLGVIYTIGPYLLPTLVKQMIKRVPQMPLMLQENYTLKLIELLKQGEIDVAIMALPFPETGLMLRPLY
DEPFVVALPSGHAWENRQKIDADDLKQETMLLLGSGHCFRDHVLGVCPELMRFSQNADGIQKTFEGSSLETIRHMVASGV
GITVLPRMSVHEVKPHAGGIDAGLLSYVAFDEPVPDRRVVLAWRKSFTRMPAIDAICDAINACDLPGVRKLDLPVAVN

Specific function: Required for the induction of a regulon of hydrogen peroxide inducible genes such as catalase and glutathione- reductase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790399, Length=303, Percent_Identity=38.2838283828383, Blast_Score=208, Evalue=3e-55,
Organism=Escherichia coli, GI1787530, Length=269, Percent_Identity=28.6245353159851, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI157672245, Length=311, Percent_Identity=26.6881028938907, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1788748, Length=303, Percent_Identity=26.0726072607261, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI2367136, Length=247, Percent_Identity=27.9352226720648, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1788887, Length=293, Percent_Identity=26.6211604095563, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI145693105, Length=263, Percent_Identity=26.9961977186312, Blast_Score=85, Evalue=8e-18,
Organism=Escherichia coli, GI1787879, Length=265, Percent_Identity=27.9245283018868, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787601, Length=174, Percent_Identity=27.5862068965517, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1788481, Length=309, Percent_Identity=25.2427184466019, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI87081904, Length=175, Percent_Identity=32.5714285714286, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1786401, Length=245, Percent_Identity=26.9387755102041, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1790262, Length=327, Percent_Identity=25.6880733944954, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1788296, Length=172, Percent_Identity=27.906976744186, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790208, Length=149, Percent_Identity=31.5436241610738, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787806, Length=257, Percent_Identity=21.011673151751, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1788297, Length=248, Percent_Identity=25.8064516129032, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 35326; Mature: 35195

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELNVQIFERGTSEVSVTPI
CCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCEEEEECCCCEEEECCC
GEQIVTQAQRVLEQTLAIKEIAKQGKDPLVGPLRLGVIYTIGPYLLPTLVKQMIKRVPQM
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PLMLQENYTLKLIELLKQGEIDVAIMALPFPETGLMLRPLYDEPFVVALPSGHAWENRQK
CEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCEEEECCCCCCCCCCCC
IDADDLKQETMLLLGSGHCFRDHVLGVCPELMRFSQNADGIQKTFEGSSLETIRHMVASG
CCHHHHHHHHEEEEECCCHHHHHHHHHCHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHCC
VGITVLPRMSVHEVKPHAGGIDAGLLSYVAFDEPVPDRRVVLAWRKSFTRMPAIDAICDA
CCEEEECCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCCEEHHHHHHHCCCCHHHHHHHH
INACDLPGVRKLDLPVAVN
HHHCCCCCCEEECCCEECC
>Mature Secondary Structure 
TLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELNVQIFERGTSEVSVTPI
CHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCEEEEECCCCEEEECCC
GEQIVTQAQRVLEQTLAIKEIAKQGKDPLVGPLRLGVIYTIGPYLLPTLVKQMIKRVPQM
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PLMLQENYTLKLIELLKQGEIDVAIMALPFPETGLMLRPLYDEPFVVALPSGHAWENRQK
CEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCEEEECCCCCCCCCCCC
IDADDLKQETMLLLGSGHCFRDHVLGVCPELMRFSQNADGIQKTFEGSSLETIRHMVASG
CCHHHHHHHHEEEEECCCHHHHHHHHHCHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHCC
VGITVLPRMSVHEVKPHAGGIDAGLLSYVAFDEPVPDRRVVLAWRKSFTRMPAIDAICDA
CCEEEECCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCCEEHHHHHHHCCCCHHHHHHHH
INACDLPGVRKLDLPVAVN
HHHCCCCCCEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA