| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is recG [H]
Identifier: 91781857
GI number: 91781857
Start: 530240
End: 532546
Strand: Direct
Name: recG [H]
Synonym: Bxe_A3988
Alternate gene names: 91781857
Gene position: 530240-532546 (Clockwise)
Preceding gene: 91781851
Following gene: 91781858
Centisome position: 10.83
GC content: 66.36
Gene sequence:
>2307_bases GTGGACCGCGAAAAAGCCGCGCGTGAAGGTGAAAAATCCGGCATCCATCCGGCTGACAAGCCGGCTGACAAACCGGCCGA TGAACCGACCGACAAGCCGACCGACAAGCCGACCGACAAGCCGGACAACATATTCGGCGACAAACCCGCCGGCAGATCTG CCGCGAAAGCCGCCGCGAAAGCCGCCGCGAAATCAGCAACGAAGCCCGCAGCGAAGTCCACCGACAAGCCGGCCGCCAAA CCCGCCGAAAAAACCGCCGACAAGCTCGCCAAACTCGGCCTGACTCGCGACATCGATCTGGTCCTGCATCTGCCCATGCG TTACGAGGACGAGACCTCGCTGACGCCGATCGGGCATCTGCTGCCCGGCGGCATTGCGCAGACCGAAGGCGTGGTGTTCG ACAACGAGATCGCCTATCGTCCACGCCGCCAGTTGCTGGTGAAACTGCGCGACGACGCCGGTGACGAACTCGTGCTGCGC TTCCTGAATTTCTACGGCTCGCAGGTCAAGCAGATGGCGATCGGCGCGCGGCTGCGGGTACGTGGCGACGTGCGCGGCGG TTTCTTCGGCATGGAGATGGTGCATCCGGCCGTGCGCGTAGTCGACGAAGACACGCCGCTGCCGCAGGCGCTGACGCCGG TCTATCCCAGCACGGCAGGCGTGACGCAGGCATATCTGCGCAAATCGATCGACAACGCGCTGTCGCGCACCTCGCTGCCG GAGTTGCTGCCCGAGCCGGTCGCGCGTACGTGGTTGGAGCCGCTCGGCGTGCCGTCGCTGATGGACGCCGTGCGCACGCT GCATCATCCGGGTGTGCAGTCCGACGAGACGGCGTTGATCGACGGCACGCATCCGGCCTGGGTGCGTATCAAGTTCGAGG AACTGCTCGCGCAGCAGATGTCGCTCAAGCGCGCGCACGAGGAGCGCCGCACGCGCGCGGCGCCGGCCATGCCGCGCCGC AAGCTCGGCGACGAATCCGCGCTGGTGGCGCGCTTGCTGAAGGCGCTGCCGTTTTCGCTGACGGCGGCGCAGGAGCGTGT GGGCGGCGAGATCGCGCTCGACCTGACGCAGCCTCATCCGATGCAGCGGCTCCTGCAGGGCGACGTCGGCAGCGGCAAGA CGATCGTCGCCGCGCTGGCCGCGGCCCAAGCTATCGACGCCGGCTATCAGGCCGCGCTCATGGCGCCGACCGAAATTCTC GCCGAACAGCACGCGCGCAAATTGCGCGGCTGGCTGGAGCCGCTCGGCGTGAGCGTCGCGTGGCTGGCCGGCAGTCTGAA GACCCGGGAAAAGCGCGCCGCCATCGAAGCCGCCGCGCTCGGCACGGCGCAACTCGTGATCGGCACGCACGCGATCATTC AGGACGCGGTGGAGTTCGCGCGCCTCGGGCTCGTGATCGTCGACGAACAGCACCGCTTCGGCGTGGCGCAACGGCTTGCG CTGCGCGCCAAGGCGCAGAACGCCGCCGACGGCGCGCGCGACTTCCAGCCGCATCAGTTGATGATGTCGGCCACGCCGAT TCCGCGCACGCTCGCGATGACGTATTACGCCGACCTCGACGTTTCGACCATCGACGAATTGCCGCCCGGGCGCACGCCGA TCCTGACCAAGCTCGTATCCGACGCGCGCCGCGAAGAGGTAATCGGGCGCGTGCGCGAGGCCGCATTGACGGGGCGCCAG GTGTACTGGGTGTGTCCGTTGATCGAGGAAAGCGAGACGTTGCAGTTGCAGACCGCGGTCGAGACTTATGAGACGCTGGT GGCCGCGTTGCCCGAGCTGAAGGTCGGTCTCGTGCATGGGCGTCTTGCGCCGGCCGAGAAGGCTGCGGTAATGGATGCGT TTACGCGCAACGAGGTGCAGTTGCTGGTGGCGACTACGGTGATCGAAGTGGGCGTCGATGTGCCGAACGCGTCCTTGATG GTGATCGAGCATGCCGAGCGGTTTGGGCTTGCGCAATTGCACCAGTTGCGCGGGCGGGTGGGGCGTGGCAGTGCGGCTTC GGTTTGCGTGCTGCTTTACACCGGGCCTTTGTCGATGACTGCGCGGGCGCGGCTTCAGACCATGCGTGAGACGACCGATG GTTTTGAGATCGCCCGGCGGGATCTGGAGATTCGTGGGCCGGGGGAGTTTTTGGGGGCGCGGCAATCGGGCGCGGCGATG CTCAGGTTTGCCGATCTTGAGAACGATCAGTGGCTGATTGAACCTGCGCGGGAGGCGGCGGCGGCTTTGCTCGAGAAATA TCCGGAGGTGGTGATGCAGCATCTGGCGCGGTGGTTGGGGGCGCGGGAGCAGTATTTGAAGGCATGA
Upstream 100 bases:
>100_bases GCCCTCCGCTAACGATGAAGTGAGCGCCGAGCCCAAGCGCCGCGTCTCGCGAGGCAAGACGGTGGCTGCCCAGGCGGGCG ATGTTGGCGCGGGGGTGGTG
Downstream 100 bases:
>100_bases GGTTTCCGGTCGCTCTTTTGCCTGCGCGGCGTTTTTTTGAGTGTGTTTCTTTGGTTCTGGCCGAGAGAGAGCACACCCAG AGGCCCCCCACTCCCCCAAA
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 768; Mature: 768
Protein sequence:
>768_residues MDREKAAREGEKSGIHPADKPADKPADEPTDKPTDKPTDKPDNIFGDKPAGRSAAKAAAKAAAKSATKPAAKSTDKPAAK PAEKTADKLAKLGLTRDIDLVLHLPMRYEDETSLTPIGHLLPGGIAQTEGVVFDNEIAYRPRRQLLVKLRDDAGDELVLR FLNFYGSQVKQMAIGARLRVRGDVRGGFFGMEMVHPAVRVVDEDTPLPQALTPVYPSTAGVTQAYLRKSIDNALSRTSLP ELLPEPVARTWLEPLGVPSLMDAVRTLHHPGVQSDETALIDGTHPAWVRIKFEELLAQQMSLKRAHEERRTRAAPAMPRR KLGDESALVARLLKALPFSLTAAQERVGGEIALDLTQPHPMQRLLQGDVGSGKTIVAALAAAQAIDAGYQAALMAPTEIL AEQHARKLRGWLEPLGVSVAWLAGSLKTREKRAAIEAAALGTAQLVIGTHAIIQDAVEFARLGLVIVDEQHRFGVAQRLA LRAKAQNAADGARDFQPHQLMMSATPIPRTLAMTYYADLDVSTIDELPPGRTPILTKLVSDARREEVIGRVREAALTGRQ VYWVCPLIEESETLQLQTAVETYETLVAALPELKVGLVHGRLAPAEKAAVMDAFTRNEVQLLVATTVIEVGVDVPNASLM VIEHAERFGLAQLHQLRGRVGRGSAASVCVLLYTGPLSMTARARLQTMRETTDGFEIARRDLEIRGPGEFLGARQSGAAM LRFADLENDQWLIEPAREAAAALLEKYPEVVMQHLARWLGAREQYLKA
Sequences:
>Translated_768_residues MDREKAAREGEKSGIHPADKPADKPADEPTDKPTDKPTDKPDNIFGDKPAGRSAAKAAAKAAAKSATKPAAKSTDKPAAK PAEKTADKLAKLGLTRDIDLVLHLPMRYEDETSLTPIGHLLPGGIAQTEGVVFDNEIAYRPRRQLLVKLRDDAGDELVLR FLNFYGSQVKQMAIGARLRVRGDVRGGFFGMEMVHPAVRVVDEDTPLPQALTPVYPSTAGVTQAYLRKSIDNALSRTSLP ELLPEPVARTWLEPLGVPSLMDAVRTLHHPGVQSDETALIDGTHPAWVRIKFEELLAQQMSLKRAHEERRTRAAPAMPRR KLGDESALVARLLKALPFSLTAAQERVGGEIALDLTQPHPMQRLLQGDVGSGKTIVAALAAAQAIDAGYQAALMAPTEIL AEQHARKLRGWLEPLGVSVAWLAGSLKTREKRAAIEAAALGTAQLVIGTHAIIQDAVEFARLGLVIVDEQHRFGVAQRLA LRAKAQNAADGARDFQPHQLMMSATPIPRTLAMTYYADLDVSTIDELPPGRTPILTKLVSDARREEVIGRVREAALTGRQ VYWVCPLIEESETLQLQTAVETYETLVAALPELKVGLVHGRLAPAEKAAVMDAFTRNEVQLLVATTVIEVGVDVPNASLM VIEHAERFGLAQLHQLRGRVGRGSAASVCVLLYTGPLSMTARARLQTMRETTDGFEIARRDLEIRGPGEFLGARQSGAAM LRFADLENDQWLIEPAREAAAALLEKYPEVVMQHLARWLGAREQYLKA >Mature_768_residues MDREKAAREGEKSGIHPADKPADKPADEPTDKPTDKPTDKPDNIFGDKPAGRSAAKAAAKAAAKSATKPAAKSTDKPAAK PAEKTADKLAKLGLTRDIDLVLHLPMRYEDETSLTPIGHLLPGGIAQTEGVVFDNEIAYRPRRQLLVKLRDDAGDELVLR FLNFYGSQVKQMAIGARLRVRGDVRGGFFGMEMVHPAVRVVDEDTPLPQALTPVYPSTAGVTQAYLRKSIDNALSRTSLP ELLPEPVARTWLEPLGVPSLMDAVRTLHHPGVQSDETALIDGTHPAWVRIKFEELLAQQMSLKRAHEERRTRAAPAMPRR KLGDESALVARLLKALPFSLTAAQERVGGEIALDLTQPHPMQRLLQGDVGSGKTIVAALAAAQAIDAGYQAALMAPTEIL AEQHARKLRGWLEPLGVSVAWLAGSLKTREKRAAIEAAALGTAQLVIGTHAIIQDAVEFARLGLVIVDEQHRFGVAQRLA LRAKAQNAADGARDFQPHQLMMSATPIPRTLAMTYYADLDVSTIDELPPGRTPILTKLVSDARREEVIGRVREAALTGRQ VYWVCPLIEESETLQLQTAVETYETLVAALPELKVGLVHGRLAPAEKAAVMDAFTRNEVQLLVATTVIEVGVDVPNASLM VIEHAERFGLAQLHQLRGRVGRGSAASVCVLLYTGPLSMTARARLQTMRETTDGFEIARRDLEIRGPGEFLGARQSGAAM LRFADLENDQWLIEPAREAAAALLEKYPEVVMQHLARWLGAREQYLKA
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=691, Percent_Identity=53.2561505065123, Blast_Score=642, Evalue=0.0, Organism=Escherichia coli, GI1787357, Length=392, Percent_Identity=37.5, Blast_Score=230, Evalue=3e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 83629; Mature: 83629
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDREKAAREGEKSGIHPADKPADKPADEPTDKPTDKPTDKPDNIFGDKPAGRSAAKAAAK CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH AAAKSATKPAAKSTDKPAAKPAEKTADKLAKLGLTRDIDLVLHLPMRYEDETSLTPIGHL HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHH LPGGIAQTEGVVFDNEIAYRPRRQLLVKLRDDAGDELVLRFLNFYGSQVKQMAIGARLRV CCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEE RGDVRGGFFGMEMVHPAVRVVDEDTPLPQALTPVYPSTAGVTQAYLRKSIDNALSRTSLP EECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCH ELLPEPVARTWLEPLGVPSLMDAVRTLHHPGVQSDETALIDGTHPAWVRIKFEELLAQQM HHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEHHHHHHHHH SLKRAHEERRTRAAPAMPRRKLGDESALVARLLKALPFSLTAAQERVGGEIALDLTQPHP HHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCH MQRLLQGDVGSGKTIVAALAAAQAIDAGYQAALMAPTEILAEQHARKLRGWLEPLGVSVA HHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHH WLAGSLKTREKRAAIEAAALGTAQLVIGTHAIIQDAVEFARLGLVIVDEQHRFGVAQRLA HHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHH LRAKAQNAADGARDFQPHQLMMSATPIPRTLAMTYYADLDVSTIDELPPGRTPILTKLVS HHHHHCCCCCCCCCCCCHHHEEECCCCCHHHEEEEEECCCHHHHHCCCCCCCHHHHHHHH DARREEVIGRVREAALTGRQVYWVCPLIEESETLQLQTAVETYETLVAALPELKVGLVHG HHHHHHHHHHHHHHHHCCCEEEEEECEECCCCCEEHHHHHHHHHHHHHHHCHHHEEHHHC RLAPAEKAAVMDAFTRNEVQLLVATTVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRV CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHCCC GRGSAASVCVLLYTGPLSMTARARLQTMRETTDGFEIARRDLEIRGPGEFLGARQSGAAM CCCCHHCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHCCCCCCCEE LRFADLENDQWLIEPAREAAAALLEKYPEVVMQHLARWLGAREQYLKA EEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC >Mature Secondary Structure MDREKAAREGEKSGIHPADKPADKPADEPTDKPTDKPTDKPDNIFGDKPAGRSAAKAAAK CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH AAAKSATKPAAKSTDKPAAKPAEKTADKLAKLGLTRDIDLVLHLPMRYEDETSLTPIGHL HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHH LPGGIAQTEGVVFDNEIAYRPRRQLLVKLRDDAGDELVLRFLNFYGSQVKQMAIGARLRV CCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEE RGDVRGGFFGMEMVHPAVRVVDEDTPLPQALTPVYPSTAGVTQAYLRKSIDNALSRTSLP EECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCH ELLPEPVARTWLEPLGVPSLMDAVRTLHHPGVQSDETALIDGTHPAWVRIKFEELLAQQM HHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEHHHHHHHHH SLKRAHEERRTRAAPAMPRRKLGDESALVARLLKALPFSLTAAQERVGGEIALDLTQPHP HHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCH MQRLLQGDVGSGKTIVAALAAAQAIDAGYQAALMAPTEILAEQHARKLRGWLEPLGVSVA HHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHH WLAGSLKTREKRAAIEAAALGTAQLVIGTHAIIQDAVEFARLGLVIVDEQHRFGVAQRLA HHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHH LRAKAQNAADGARDFQPHQLMMSATPIPRTLAMTYYADLDVSTIDELPPGRTPILTKLVS HHHHHCCCCCCCCCCCCHHHEEECCCCCHHHEEEEEECCCHHHHHCCCCCCCHHHHHHHH DARREEVIGRVREAALTGRQVYWVCPLIEESETLQLQTAVETYETLVAALPELKVGLVHG HHHHHHHHHHHHHHHHCCCEEEEEECEECCCCCEEHHHHHHHHHHHHHHHCHHHEEHHHC RLAPAEKAAVMDAFTRNEVQLLVATTVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRV CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHCCC GRGSAASVCVLLYTGPLSMTARARLQTMRETTDGFEIARRDLEIRGPGEFLGARQSGAAM CCCCHHCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHCCCCCCCEE LRFADLENDQWLIEPAREAAAALLEKYPEVVMQHLARWLGAREQYLKA EEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]