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The map label for this gene is ydfH [C]

Identifier: 91781756

GI number: 91781756

Start: 411854

End: 412546

Strand: Direct

Name: ydfH [C]

Synonym: Bxe_A4089

Alternate gene names: 91781756

Gene position: 411854-412546 (Clockwise)

Preceding gene: 91781748

Following gene: 91781757

Centisome position: 8.41

GC content: 65.95

Gene sequence:

>693_bases
ATGGACGAAACTGTCGACACACGCGACGACGAGGAGCAGGGCGACGCATCGCCGGTCGGGGAGATCGTCGACTGGGTGGC
GCGCGGCATCATCGAAGGCCGGCTGCAGCCGGGCGACGATCTCAATTCGGTCGATCTGGCGAAACGCTTCAACGTGAGCC
GCACGCCGGTGCGCGAAGCGCTGTTCGTGCTGAACCGCGAACGTCTGGTCGACTGGTCGCCGCGACGGCGGCCGCGCGTG
TCGTCCATGAGCCTCACGGAGGTGCGCGAGATCTATCAACTGCGTGTCCTGCTATACGGCCAGGTGTCGCTCGCGATCGC
CGAGCAAGCCACCGCCGGGGACATCGATTCGTTATGGCGCGCTCACGCGCGTCTGGCCGACGCGGCTGCGCGCGCCGATG
TCGACGGCTATTTCTGGGCCAACGTCGCGTTTCGCGATGAAGAGCTGCGAATAAGCCGCAACGGCATCTTCAAGGAAGTG
CTCGACTCGATGCGCATGCGCACCAACCGGCTGCGCCACCTCAGCACGTCGTTGCCCGGCCGCATGCAGCGCTCGTGCTC
CGATCATCAACGGCTGTGCGAAGCGTATGCGGAGCGCGACGGCACGCTCGCGGCCGCGCTCAACCGCTCGATCGTGCTGA
CCGCGTTACAGGCGATCGAGCAGGTGTGGGAGTCGGAATCCGGCAAGGGTTGA

Upstream 100 bases:

>100_bases
AACGGGAAGTCGGATGAGTCTCGCCGGGCGGTGGTTTGCTAGAATCCGTCCACGCAGCGGGGCGGCGCGCCCACGGATAT
CGAGGACAAGGAATAACGGG

Downstream 100 bases:

>100_bases
GGCACTTGCGGCGCCGCGGCGCATCGCTTCTTCCGCATCCGGAACGTCTGCCAGGGATAAACCTGGTCACCAGTCCTGGC
GTGCCTCAGCGGCACGTTTG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; Transcriptional Regulator Gntr Family; Transcriptional Regulator GntR; Transcriptional Regulator Protein GntR Family; GntR Family Regulatory Protein; Transcription Regulator

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MDETVDTRDDEEQGDASPVGEIVDWVARGIIEGRLQPGDDLNSVDLAKRFNVSRTPVREALFVLNRERLVDWSPRRRPRV
SSMSLTEVREIYQLRVLLYGQVSLAIAEQATAGDIDSLWRAHARLADAAARADVDGYFWANVAFRDEELRISRNGIFKEV
LDSMRMRTNRLRHLSTSLPGRMQRSCSDHQRLCEAYAERDGTLAAALNRSIVLTALQAIEQVWESESGKG

Sequences:

>Translated_230_residues
MDETVDTRDDEEQGDASPVGEIVDWVARGIIEGRLQPGDDLNSVDLAKRFNVSRTPVREALFVLNRERLVDWSPRRRPRV
SSMSLTEVREIYQLRVLLYGQVSLAIAEQATAGDIDSLWRAHARLADAAARADVDGYFWANVAFRDEELRISRNGIFKEV
LDSMRMRTNRLRHLSTSLPGRMQRSCSDHQRLCEAYAERDGTLAAALNRSIVLTALQAIEQVWESESGKG
>Mature_230_residues
MDETVDTRDDEEQGDASPVGEIVDWVARGIIEGRLQPGDDLNSVDLAKRFNVSRTPVREALFVLNRERLVDWSPRRRPRV
SSMSLTEVREIYQLRVLLYGQVSLAIAEQATAGDIDSLWRAHARLADAAARADVDGYFWANVAFRDEELRISRNGIFKEV
LDSMRMRTNRLRHLSTSLPGRMQRSCSDHQRLCEAYAERDGTLAAALNRSIVLTALQAIEQVWESESGKG

Specific function: Unknown

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26015; Mature: 26015

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDETVDTRDDEEQGDASPVGEIVDWVARGIIEGRLQPGDDLNSVDLAKRFNVSRTPVREA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHH
LFVLNRERLVDWSPRRRPRVSSMSLTEVREIYQLRVLLYGQVSLAIAEQATAGDIDSLWR
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AHARLADAAARADVDGYFWANVAFRDEELRISRNGIFKEVLDSMRMRTNRLRHLSTSLPG
HHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCH
RMQRSCSDHQRLCEAYAERDGTLAAALNRSIVLTALQAIEQVWESESGKG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDETVDTRDDEEQGDASPVGEIVDWVARGIIEGRLQPGDDLNSVDLAKRFNVSRTPVREA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHH
LFVLNRERLVDWSPRRRPRVSSMSLTEVREIYQLRVLLYGQVSLAIAEQATAGDIDSLWR
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AHARLADAAARADVDGYFWANVAFRDEELRISRNGIFKEVLDSMRMRTNRLRHLSTSLPG
HHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCH
RMQRSCSDHQRLCEAYAERDGTLAAALNRSIVLTALQAIEQVWESESGKG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA