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The map label for this gene is yajR [H]

Identifier: 91781738

GI number: 91781738

Start: 391066

End: 392223

Strand: Direct

Name: yajR [H]

Synonym: Bxe_A4107

Alternate gene names: 91781738

Gene position: 391066-392223 (Clockwise)

Preceding gene: 91781734

Following gene: 91781739

Centisome position: 7.99

GC content: 62.35

Gene sequence:

>1158_bases
ATGAGCGCGCCTGAACTGCGCGCGACCGTGTCGCTTGCCGCGATCTTCGCGCTGCGCATGCTGGGTCTCTTCATGATCAT
GCCGGTGTTCTCGATCTACGCGAAGACCATCCCCGGCGGCGACAACGTGCTGCTGGTGGGTATCGCGCTCGGCGCGTACG
GCGTGACGCAGTCCATGCTTTACATCTTCTACGGCTGGGTCTCCGACAAGGTTGGCCGCAAACCGGTCATTGCGACCGGC
CTCCTGATCTTCGCGCTCGGCAGCTTCGTGGCGGCGGGCGCGCACGATATGACGTGGATCATCGTCGGCCGGGTGATTCA
GGGCATGGGCGCGGTGTCCTCCGCGGTGATCGCGTTTATCGCCGACCTGACCGCCGAAGAAAATCGCACCAAGGCAATGG
CGATGGTGGGCGGCAGTATCGGCGTGTCGTTCGCGGTGGCGATCGTCGGCGCGCCGATCGTGTTCCAATGGGTCGGCATG
AGCGGCCTGTTCACGCTGGTCGGCATCTTCTCGATTCTGGCCGTCGGCGTGGTGCTGTGGATCGTGCCCGATGCGCCCAA
ACCGGTGCACGTGCGCGCGCCGTTCGCCGAAGTGCTGCACAACGTCGAATTGCTGCGGCTGAATTTTGGCGTGCTCGTGC
TGCACGCGACGCAAACCGCGTTGTTCCTCGTCGTGCCGCGCATTCTCGAAGCCGGTGGTCTGCCGGTCGCGTCGCACTGG
AAAGTGTATTTGCCGGTCATGGGCCTCTCGTTCGTGATGATGGTGCCGGCGATCATCGCCGCGGAAAAGCGCGGCAAAAT
GAAAATCGTGCTGCTGTCGGCAATCGCTCTTATCCTGATCGGACAGTTGTTATTGGGCGTCGCTCCGCATACGATTCTGA
GTGTGGCGGCGATCCTTTTTGTGTACTTTCTCGGCTTCAATATTCTCGAGGCTTCGCAGCCTTCGCTGGTGTCGAAGCTG
GCGCCCGGAACCCGCAAGGGCGCGGCCGCCGGCGTGTACAACACCACGCAGTCGATCGGTCTTGCGCTGGGCGGGGTGGT
CGGCGGCTGGTTGCTGAAGGCGGACGGTCAGAGCGCTGTGTTCTTCACTTGTTCGGGGCTCGTCTTTTGCTGGCTTATAA
TCGCCGCAAAGATGAAACAGCCGCCGCGCAAAGCGTAA

Upstream 100 bases:

>100_bases
CGGTTCGTGGCCGCCTTGCCGCTGTGCCCGCCCGCGGTGTGCCGCCCAGCTCATTCAAAGAACGCTCCCGATGTCCAATC
CGTCCGCCACTTCCTCACGC

Downstream 100 bases:

>100_bases
TACGGCGCATCCCGAACTCATCCAGAACTCACCCGGCGGCGGGCAGAGGCGCAGTTCCGGTCTCGGGCCCGCCGGCCCTG
AAACGCGAACCGTGTATTGC

Product: major facilitator superfamily multidrug efflux transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MSAPELRATVSLAAIFALRMLGLFMIMPVFSIYAKTIPGGDNVLLVGIALGAYGVTQSMLYIFYGWVSDKVGRKPVIATG
LLIFALGSFVAAGAHDMTWIIVGRVIQGMGAVSSAVIAFIADLTAEENRTKAMAMVGGSIGVSFAVAIVGAPIVFQWVGM
SGLFTLVGIFSILAVGVVLWIVPDAPKPVHVRAPFAEVLHNVELLRLNFGVLVLHATQTALFLVVPRILEAGGLPVASHW
KVYLPVMGLSFVMMVPAIIAAEKRGKMKIVLLSAIALILIGQLLLGVAPHTILSVAAILFVYFLGFNILEASQPSLVSKL
APGTRKGAAAGVYNTTQSIGLALGGVVGGWLLKADGQSAVFFTCSGLVFCWLIIAAKMKQPPRKA

Sequences:

>Translated_385_residues
MSAPELRATVSLAAIFALRMLGLFMIMPVFSIYAKTIPGGDNVLLVGIALGAYGVTQSMLYIFYGWVSDKVGRKPVIATG
LLIFALGSFVAAGAHDMTWIIVGRVIQGMGAVSSAVIAFIADLTAEENRTKAMAMVGGSIGVSFAVAIVGAPIVFQWVGM
SGLFTLVGIFSILAVGVVLWIVPDAPKPVHVRAPFAEVLHNVELLRLNFGVLVLHATQTALFLVVPRILEAGGLPVASHW
KVYLPVMGLSFVMMVPAIIAAEKRGKMKIVLLSAIALILIGQLLLGVAPHTILSVAAILFVYFLGFNILEASQPSLVSKL
APGTRKGAAAGVYNTTQSIGLALGGVVGGWLLKADGQSAVFFTCSGLVFCWLIIAAKMKQPPRKA
>Mature_384_residues
SAPELRATVSLAAIFALRMLGLFMIMPVFSIYAKTIPGGDNVLLVGIALGAYGVTQSMLYIFYGWVSDKVGRKPVIATGL
LIFALGSFVAAGAHDMTWIIVGRVIQGMGAVSSAVIAFIADLTAEENRTKAMAMVGGSIGVSFAVAIVGAPIVFQWVGMS
GLFTLVGIFSILAVGVVLWIVPDAPKPVHVRAPFAEVLHNVELLRLNFGVLVLHATQTALFLVVPRILEAGGLPVASHWK
VYLPVMGLSFVMMVPAIIAAEKRGKMKIVLLSAIALILIGQLLLGVAPHTILSVAAILFVYFLGFNILEASQPSLVSKLA
PGTRKGAAAGVYNTTQSIGLALGGVVGGWLLKADGQSAVFFTCSGLVFCWLIIAAKMKQPPRKA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=389, Percent_Identity=41.6452442159383, Blast_Score=298, Evalue=5e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40482; Mature: 40351

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPELRATVSLAAIFALRMLGLFMIMPVFSIYAKTIPGGDNVLLVGIALGAYGVTQSML
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHH
YIFYGWVSDKVGRKPVIATGLLIFALGSFVAAGAHDMTWIIVGRVIQGMGAVSSAVIAFI
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ADLTAEENRTKAMAMVGGSIGVSFAVAIVGAPIVFQWVGMSGLFTLVGIFSILAVGVVLW
HHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
IVPDAPKPVHVRAPFAEVLHNVELLRLNFGVLVLHATQTALFLVVPRILEAGGLPVASHW
EECCCCCCEEEECCHHHHHCCCEEEEEECCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCC
KVYLPVMGLSFVMMVPAIIAAEKRGKMKIVLLSAIALILIGQLLLGVAPHTILSVAAILF
EEEHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
VYFLGFNILEASQPSLVSKLAPGTRKGAAAGVYNTTQSIGLALGGVVGGWLLKADGQSAV
HHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEECCCCCEE
FFTCSGLVFCWLIIAAKMKQPPRKA
EEEHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SAPELRATVSLAAIFALRMLGLFMIMPVFSIYAKTIPGGDNVLLVGIALGAYGVTQSML
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHH
YIFYGWVSDKVGRKPVIATGLLIFALGSFVAAGAHDMTWIIVGRVIQGMGAVSSAVIAFI
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ADLTAEENRTKAMAMVGGSIGVSFAVAIVGAPIVFQWVGMSGLFTLVGIFSILAVGVVLW
HHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
IVPDAPKPVHVRAPFAEVLHNVELLRLNFGVLVLHATQTALFLVVPRILEAGGLPVASHW
EECCCCCCEEEECCHHHHHCCCEEEEEECCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCC
KVYLPVMGLSFVMMVPAIIAAEKRGKMKIVLLSAIALILIGQLLLGVAPHTILSVAAILF
EEEHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
VYFLGFNILEASQPSLVSKLAPGTRKGAAAGVYNTTQSIGLALGGVVGGWLLKADGQSAV
HHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEECCCCCEE
FFTCSGLVFCWLIIAAKMKQPPRKA
EEEHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]