| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91781733
Identifier: 91781733
GI number: 91781733
Start: 382972
End: 383820
Strand: Direct
Name: 91781733
Synonym: Bxe_A4113
Alternate gene names: NA
Gene position: 382972-383820 (Clockwise)
Preceding gene: 91781732
Following gene: 91781734
Centisome position: 7.82
GC content: 67.96
Gene sequence:
>849_bases ATGACTTTGCCTTGCATCACCGCCGCGCGCCGCTTCGACGTGCAGGCGCACGTGCCGTTCTGGATCGACGCCGAACAGGT CGGCTGGATCCGCGCGAGCGACGTGCCGTCACTCGCGCGCTGGCCCGATGTGTTCGACCTCGACAATGCGCGTGTGACGC TGACGCCCACGTTCAATACGGTGGATCTGCGCAGCGCCGCGCTCGGTTCCGTGATCGGCGCGCTCGCCGCCGAAGGCCGC ATTCCGGGCTGGCGCAACGAGACCTACGCGATCCGCAATGCGTTCGACGCGCCGCCGCTCGCGTATATCGAACGCGCGGC GTCGCGCTTCTTCGGCACGATGACCTACGCGGTGCATCTGAACGGCGTCGTAGAATACGCGGACGGCGCACCGCAATTGT GGATCGCGCGCCGCAGCGACACCAAGGCGACCGACCCGGGCATGCTCGACAATGTCGTGGCAGGCGGGATCGGCTGGGGC TTTGGCGTCGAGGCGACGATCATCAAGGAGTGCTGGGAAGAAGCCGGCATTCCCGAGGAGATCGCCGCCCGCGCCGTGGC CGGCCGCACCGCGCATGTGCTGCAGTCGTTGCCGGAAGGCACGCAGGCCGAGCAGATTTTCATCTACGACCTCGCGCTGC CGGCGGATTTCGCGCCGCGCAATCAGGACGGCGAAGTGGGCGAGCACCGGCTCGCGCGCATCGACGAAGTGGCGCGCTGG ATCGAGGAGGGCGCGATGACGGTCGATGCGAGTCTGGCCACGCTGGATTGCCTGCTGCGCCGCCGCTGGATCGATGAAGA CGCGTGCGCCGGGATCGAGGCTCTGTTCGTGCCGCCGGTGTTCGCCTGA
Upstream 100 bases:
>100_bases GGATTCGCGTCGCGTTGCGCGATTGAGGCGATCGACGCGGCGCTCGGCGCTCAGCGCCAGGTGCTCACCGGGCAGGACCG CGAACCGTTTGGAGCTTGAC
Downstream 100 bases:
>100_bases CCGCCGCAAATGGTGCGTGCGCAACGAACTTGCCGAAACACGTTGCATCGAACCATGCACACCGAACAAACCACGCATTG AAGAAGGGAGTCACCCAGGT
Product: putative NTP pyrophosphohydrolases including oxidative damage repair enzymes
Products: NA
Alternate protein names: Thiamin Pyrophosphokinase; NUDIX Domain-Containing Protein; Nucleoside Diphosphate; Thiamine Pyrophosphokinase; Nucleoside Diphosphate Hydrolase Protein; NTP Pyrophosphohydrolase; MutT/Nudix Family Protein; NUDIX Domain Family Protein; Nudix Family Protein; NTP Pyrophosphohydrolase Including Oxidative Damage Repair; Nudix Hydrolase; NUDIX Domain-Containing; Hydrolase NUDIX Family
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MTLPCITAARRFDVQAHVPFWIDAEQVGWIRASDVPSLARWPDVFDLDNARVTLTPTFNTVDLRSAALGSVIGALAAEGR IPGWRNETYAIRNAFDAPPLAYIERAASRFFGTMTYAVHLNGVVEYADGAPQLWIARRSDTKATDPGMLDNVVAGGIGWG FGVEATIIKECWEEAGIPEEIAARAVAGRTAHVLQSLPEGTQAEQIFIYDLALPADFAPRNQDGEVGEHRLARIDEVARW IEEGAMTVDASLATLDCLLRRRWIDEDACAGIEALFVPPVFA
Sequences:
>Translated_282_residues MTLPCITAARRFDVQAHVPFWIDAEQVGWIRASDVPSLARWPDVFDLDNARVTLTPTFNTVDLRSAALGSVIGALAAEGR IPGWRNETYAIRNAFDAPPLAYIERAASRFFGTMTYAVHLNGVVEYADGAPQLWIARRSDTKATDPGMLDNVVAGGIGWG FGVEATIIKECWEEAGIPEEIAARAVAGRTAHVLQSLPEGTQAEQIFIYDLALPADFAPRNQDGEVGEHRLARIDEVARW IEEGAMTVDASLATLDCLLRRRWIDEDACAGIEALFVPPVFA >Mature_281_residues TLPCITAARRFDVQAHVPFWIDAEQVGWIRASDVPSLARWPDVFDLDNARVTLTPTFNTVDLRSAALGSVIGALAAEGRI PGWRNETYAIRNAFDAPPLAYIERAASRFFGTMTYAVHLNGVVEYADGAPQLWIARRSDTKATDPGMLDNVVAGGIGWGF GVEATIIKECWEEAGIPEEIAARAVAGRTAHVLQSLPEGTQAEQIFIYDLALPADFAPRNQDGEVGEHRLARIDEVARWI EEGAMTVDASLATLDCLLRRRWIDEDACAGIEALFVPPVFA
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322602, Length=240, Percent_Identity=28.75, Blast_Score=117, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30836; Mature: 30705
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPCITAARRFDVQAHVPFWIDAEQVGWIRASDVPSLARWPDVFDLDNARVTLTPTFNT CCCCHHHHHHHCCEEECCCEEECHHHCCEEECCCCCCHHHCCCCEECCCCEEEEEECCCC VDLRSAALGSVIGALAAEGRIPGWRNETYAIRNAFDAPPLAYIERAASRFFGTMTYAVHL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHEEEEEEE NGVVEYADGAPQLWIARRSDTKATDPGMLDNVVAGGIGWGFGVEATIIKECWEEAGIPEE CCEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHH IAARAVAGRTAHVLQSLPEGTQAEQIFIYDLALPADFAPRNQDGEVGEHRLARIDEVARW HHHHHHCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH IEEGAMTVDASLATLDCLLRRRWIDEDACAGIEALFVPPVFA HHHCCEEECHHHHHHHHHHHHHCCCHHHHCCCEEEECCCCCC >Mature Secondary Structure TLPCITAARRFDVQAHVPFWIDAEQVGWIRASDVPSLARWPDVFDLDNARVTLTPTFNT CCCHHHHHHHCCEEECCCEEECHHHCCEEECCCCCCHHHCCCCEECCCCEEEEEECCCC VDLRSAALGSVIGALAAEGRIPGWRNETYAIRNAFDAPPLAYIERAASRFFGTMTYAVHL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHEEEEEEE NGVVEYADGAPQLWIARRSDTKATDPGMLDNVVAGGIGWGFGVEATIIKECWEEAGIPEE CCEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHH IAARAVAGRTAHVLQSLPEGTQAEQIFIYDLALPADFAPRNQDGEVGEHRLARIDEVARW HHHHHHCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH IEEGAMTVDASLATLDCLLRRRWIDEDACAGIEALFVPPVFA HHHCCEEECHHHHHHHHHHHHHCCCHHHHCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA