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The map label for this gene is lptA [H]

Identifier: 91781726

GI number: 91781726

Start: 376568

End: 377239

Strand: Reverse

Name: lptA [H]

Synonym: Bxe_A4120

Alternate gene names: 91781726

Gene position: 377239-376568 (Counterclockwise)

Preceding gene: 91781727

Following gene: 91781725

Centisome position: 7.71

GC content: 65.77

Gene sequence:

>672_bases
ATGAACGAATCGTTCCCCCGTTTTGACACCGGCCGCTCGCGCTCCCTGTCCGCGTGCCGCGCCGGACTCGCCGCGCTGAT
CGTCGCGTTGCCGCTCGCCGGCTTCGCGCCGCTCGCGCACGCGGACCGTGCCGACAAGGACAAGCCGCTGAACATTGAAG
CGGACAACATGACTTACGACGACCTCAAGCAGGTCAACATCTTCACCGGCCATGTGGTCGCGACCAAAGGCACGATCGTG
ATCAAGGCCGAACGCGTCGAAGTGACGCAAGACCCGCAGGGCTATCAGTACGCCACCGGCACGTCGAGCGGCGGCAATCT
GTCGTATTTCCGCCAGAAGCGCGAAGGCCTCGACGAATACATCGAAGGCACGGCCGTTCGGATCGACTACGACGGCAAGC
AGGATCTGACCACGCTCACCACCAACGCCACGGTGAAACGCCTGCAAGGCCTCTCCACGGTGATGGACCAGGTGCACGGC
AGCGTCATTACCTATGACGGCCAGAGCGACTTCTATACCGCGAAGGCAGGCAAGGACGTCGCCGGCCCGGGCAATCCCAC
GGGTCGCGTGCGCGCCATGCTGGCGCCGCGCAATGGCGGCGCTGCGCCGCTGAACGGCGCGCCGGCCACGCTCGCGCCGT
CCACGACGATCCAGGGAGCGCCGAACCAGTGA

Upstream 100 bases:

>100_bases
TGATGCAGCTGTTCGGCAACGTGAAAGGCTCGATCGCCCCGTCCGAAACAGGCGGCAGCTCGCCCAAGCAACCCGGGTAA
TCCATTCCAGGCGTGACTGC

Downstream 100 bases:

>100_bases
GCACCTCTGCGTCTCTCCCCAATCGCAAGCCCGCCGGCACCAGCAGTTCGCTGGTGGTGCGCAACCTGAAAAAGCGTTAC
GGTTCGCGCACGGTCGTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MNESFPRFDTGRSRSLSACRAGLAALIVALPLAGFAPLAHADRADKDKPLNIEADNMTYDDLKQVNIFTGHVVATKGTIV
IKAERVEVTQDPQGYQYATGTSSGGNLSYFRQKREGLDEYIEGTAVRIDYDGKQDLTTLTTNATVKRLQGLSTVMDQVHG
SVITYDGQSDFYTAKAGKDVAGPGNPTGRVRAMLAPRNGGAAPLNGAPATLAPSTTIQGAPNQ

Sequences:

>Translated_223_residues
MNESFPRFDTGRSRSLSACRAGLAALIVALPLAGFAPLAHADRADKDKPLNIEADNMTYDDLKQVNIFTGHVVATKGTIV
IKAERVEVTQDPQGYQYATGTSSGGNLSYFRQKREGLDEYIEGTAVRIDYDGKQDLTTLTTNATVKRLQGLSTVMDQVHG
SVITYDGQSDFYTAKAGKDVAGPGNPTGRVRAMLAPRNGGAAPLNGAPATLAPSTTIQGAPNQ
>Mature_223_residues
MNESFPRFDTGRSRSLSACRAGLAALIVALPLAGFAPLAHADRADKDKPLNIEADNMTYDDLKQVNIFTGHVVATKGTIV
IKAERVEVTQDPQGYQYATGTSSGGNLSYFRQKREGLDEYIEGTAVRIDYDGKQDLTTLTTNATVKRLQGLSTVMDQVHG
SVITYDGQSDFYTAKAGKDVAGPGNPTGRVRAMLAPRNGGAAPLNGAPATLAPSTTIQGAPNQ

Specific function: Required for the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane. May act as a chaperone that facilitates LPS transfer across the aquaeous environment of the periplasm. Interacts specifically with the lipid A domain

COG id: COG1934

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptA family [H]

Homologues:

None

Paralogues:

None

Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014340
- InterPro:   IPR005653 [H]

Pfam domain/function: PF03968 OstA [H]

EC number: NA

Molecular weight: Translated: 23662; Mature: 23662

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: PS00108 PROTEIN_KINASE_ST

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNESFPRFDTGRSRSLSACRAGLAALIVALPLAGFAPLAHADRADKDKPLNIEADNMTYD
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCEEEECCCCHH
DLKQVNIFTGHVVATKGTIVIKAERVEVTQDPQGYQYATGTSSGGNLSYFRQKREGLDEY
HHHEEEEEECEEEEECCEEEEEEEEEEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHHH
IEGTAVRIDYDGKQDLTTLTTNATVKRLQGLSTVMDQVHGSVITYDGQSDFYTAKAGKDV
HCCCEEEEECCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCC
AGPGNPTGRVRAMLAPRNGGAAPLNGAPATLAPSTTIQGAPNQ
CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNESFPRFDTGRSRSLSACRAGLAALIVALPLAGFAPLAHADRADKDKPLNIEADNMTYD
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCEEEECCCCHH
DLKQVNIFTGHVVATKGTIVIKAERVEVTQDPQGYQYATGTSSGGNLSYFRQKREGLDEY
HHHEEEEEECEEEEECCEEEEEEEEEEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHHH
IEGTAVRIDYDGKQDLTTLTTNATVKRLQGLSTVMDQVHGSVITYDGQSDFYTAKAGKDV
HCCCEEEEECCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCC
AGPGNPTGRVRAMLAPRNGGAAPLNGAPATLAPSTTIQGAPNQ
CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]