| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is prs [H]
Identifier: 91781713
GI number: 91781713
Start: 363214
End: 364170
Strand: Reverse
Name: prs [H]
Synonym: Bxe_A4133
Alternate gene names: 91781713
Gene position: 364170-363214 (Counterclockwise)
Preceding gene: 91781714
Following gene: 91781712
Centisome position: 7.44
GC content: 59.87
Gene sequence:
>957_bases ATGAGCAGCCATGACGGCCTGATGGTTTTTACTGGCAACGCAAATCCCGCGCTTGCACAGGAAGTCGTCAAAATCCTCGG TATTCCCCTCGGCAAAGCAATGGTCAGCCGTTTCTCGGACGGTGAAATCCAGGTCGAGATTCAGGAAAACGTGCGTGGCA AGGATGTCTTCGTCCTGCAGTCCACGTGCGCACCGGCGAACGACAATCTGATGGAACTGATGATCATGGTCGATGCGCTC AAGCGCGCATCCGCAGGCCGGATCACCGCAGCCATCCCCTACTTCGGTTATGCCCGTCAAGATCGCCGCCCGCGTTCCGC GCGCGTCGCCATCTCGGCGAAGATCGTGGCGAACATGCTGGAAATCGCCGGCGTCGAGCGGATCATTACGATGGATCTGC ACGCCGACCAGATTCAAGGCTTCTTCGACATTCCGGTCGACAACATCTACGCTACGCCCGTGCTGCTCGGCGATCTGCGC AAGCAGAACTACGAGAATCTGCTGGTCGTTTCGCCGGACGTCGGCGGCGTGGTGCGTGCCCGTGCATTGGCCAAACAGCT CAATTGCGATCTCGCGATCATCGACAAACGCCGCCCGAAGGCGAACGTTGCCGAAGTGATGAACATCATCGGTGAAGTCG AAGGTCGTACCTGCGTGATCATGGACGACATGGTCGATACTGCCGGCACGCTCTGCAAGGCAGCTCAGGTTCTGAAGGAA CGCGGCGCGAAACAGGTGTTCGCTTATGCCACTCACCCGGTTCTGTCGGGCGGCGCGGGCGAGCGTATCGCTGCCTCCGC ACTCGACGAACTCGTTGTCACGGACACGATCCCGCTCGGCGAAGAAGCCCGCTCGTGCGCGAAGATCCGCTCGTTGACCA GCGCTGGCCTGCTGGCCGAAACGTTCTCGCGGATTCGCCGCGGCGATTCGGTGATGTCGCTGTTCGCTGAAAGTTAA
Upstream 100 bases:
>100_bases GGCACCGGATTTTGATTCCGGCATGCAAAGGTTCGAATCCTTTCTCCCCTGCCAAAATTTCTCGCATTTCCCCTCGCCCC CAGCCTGAAGCAGGTGCACG
Downstream 100 bases:
>100_bases GTATTTGCGAAGGCGCAGCGCGCCGCTTCAGGCGGCACACCGCGCTTTTGCACAATCGGCATGAACGAACGAAGGTTCGT GCCGCAGCTCTGGGGCCTCA
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MSSHDGLMVFTGNANPALAQEVVKILGIPLGKAMVSRFSDGEIQVEIQENVRGKDVFVLQSTCAPANDNLMELMIMVDAL KRASAGRITAAIPYFGYARQDRRPRSARVAISAKIVANMLEIAGVERIITMDLHADQIQGFFDIPVDNIYATPVLLGDLR KQNYENLLVVSPDVGGVVRARALAKQLNCDLAIIDKRRPKANVAEVMNIIGEVEGRTCVIMDDMVDTAGTLCKAAQVLKE RGAKQVFAYATHPVLSGGAGERIAASALDELVVTDTIPLGEEARSCAKIRSLTSAGLLAETFSRIRRGDSVMSLFAES
Sequences:
>Translated_318_residues MSSHDGLMVFTGNANPALAQEVVKILGIPLGKAMVSRFSDGEIQVEIQENVRGKDVFVLQSTCAPANDNLMELMIMVDAL KRASAGRITAAIPYFGYARQDRRPRSARVAISAKIVANMLEIAGVERIITMDLHADQIQGFFDIPVDNIYATPVLLGDLR KQNYENLLVVSPDVGGVVRARALAKQLNCDLAIIDKRRPKANVAEVMNIIGEVEGRTCVIMDDMVDTAGTLCKAAQVLKE RGAKQVFAYATHPVLSGGAGERIAASALDELVVTDTIPLGEEARSCAKIRSLTSAGLLAETFSRIRRGDSVMSLFAES >Mature_317_residues SSHDGLMVFTGNANPALAQEVVKILGIPLGKAMVSRFSDGEIQVEIQENVRGKDVFVLQSTCAPANDNLMELMIMVDALK RASAGRITAAIPYFGYARQDRRPRSARVAISAKIVANMLEIAGVERIITMDLHADQIQGFFDIPVDNIYATPVLLGDLRK QNYENLLVVSPDVGGVVRARALAKQLNCDLAIIDKRRPKANVAEVMNIIGEVEGRTCVIMDDMVDTAGTLCKAAQVLKER GAKQVFAYATHPVLSGGAGERIAASALDELVVTDTIPLGEEARSCAKIRSLTSAGLLAETFSRIRRGDSVMSLFAES
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506129, Length=314, Percent_Identity=47.7707006369427, Blast_Score=305, Evalue=5e-83, Organism=Homo sapiens, GI28557709, Length=314, Percent_Identity=48.0891719745223, Blast_Score=304, Evalue=8e-83, Organism=Homo sapiens, GI4506127, Length=314, Percent_Identity=47.7707006369427, Blast_Score=303, Evalue=1e-82, Organism=Homo sapiens, GI84875539, Length=316, Percent_Identity=47.1518987341772, Blast_Score=303, Evalue=2e-82, Organism=Homo sapiens, GI4506133, Length=346, Percent_Identity=36.7052023121387, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI194018537, Length=345, Percent_Identity=37.3913043478261, Blast_Score=205, Evalue=4e-53, Organism=Homo sapiens, GI310128524, Length=149, Percent_Identity=36.9127516778523, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI310115209, Length=149, Percent_Identity=36.9127516778523, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI310118259, Length=149, Percent_Identity=36.9127516778523, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI310119946, Length=149, Percent_Identity=36.9127516778523, Blast_Score=101, Evalue=1e-21, Organism=Escherichia coli, GI1787458, Length=310, Percent_Identity=62.9032258064516, Blast_Score=417, Evalue=1e-118, Organism=Caenorhabditis elegans, GI17554702, Length=314, Percent_Identity=46.8152866242038, Blast_Score=302, Evalue=1e-82, Organism=Caenorhabditis elegans, GI17554704, Length=311, Percent_Identity=47.2668810289389, Blast_Score=302, Evalue=2e-82, Organism=Caenorhabditis elegans, GI25149168, Length=314, Percent_Identity=46.8152866242038, Blast_Score=301, Evalue=2e-82, Organism=Caenorhabditis elegans, GI71989924, Length=314, Percent_Identity=46.8152866242038, Blast_Score=301, Evalue=3e-82, Organism=Caenorhabditis elegans, GI17570245, Length=339, Percent_Identity=33.6283185840708, Blast_Score=202, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6319403, Length=318, Percent_Identity=43.7106918238994, Blast_Score=266, Evalue=2e-72, Organism=Saccharomyces cerevisiae, GI6321776, Length=313, Percent_Identity=44.408945686901, Blast_Score=265, Evalue=5e-72, Organism=Saccharomyces cerevisiae, GI6320946, Length=319, Percent_Identity=42.9467084639498, Blast_Score=265, Evalue=7e-72, Organism=Saccharomyces cerevisiae, GI6322667, Length=196, Percent_Identity=43.3673469387755, Blast_Score=161, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6324511, Length=108, Percent_Identity=39.8148148148148, Blast_Score=95, Evalue=1e-20, Organism=Drosophila melanogaster, GI21355239, Length=313, Percent_Identity=48.2428115015974, Blast_Score=296, Evalue=2e-80, Organism=Drosophila melanogaster, GI45551540, Length=335, Percent_Identity=45.0746268656716, Blast_Score=286, Evalue=9e-78, Organism=Drosophila melanogaster, GI24651458, Length=359, Percent_Identity=33.7047353760446, Blast_Score=205, Evalue=3e-53, Organism=Drosophila melanogaster, GI24651456, Length=359, Percent_Identity=33.7047353760446, Blast_Score=205, Evalue=3e-53, Organism=Drosophila melanogaster, GI281362873, Length=359, Percent_Identity=33.7047353760446, Blast_Score=205, Evalue=4e-53, Organism=Drosophila melanogaster, GI24651454, Length=359, Percent_Identity=33.7047353760446, Blast_Score=205, Evalue=4e-53, Organism=Drosophila melanogaster, GI24651462, Length=207, Percent_Identity=38.6473429951691, Blast_Score=145, Evalue=3e-35, Organism=Drosophila melanogaster, GI24651464, Length=207, Percent_Identity=38.6473429951691, Blast_Score=145, Evalue=3e-35, Organism=Drosophila melanogaster, GI45552010, Length=207, Percent_Identity=38.6473429951691, Blast_Score=145, Evalue=3e-35,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 34287; Mature: 34156
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER ; PS00114 PRPP_SYNTHETASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSHDGLMVFTGNANPALAQEVVKILGIPLGKAMVSRFSDGEIQVEIQENVRGKDVFVLQ CCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEECCCCCCEEEEEE STCAPANDNLMELMIMVDALKRASAGRITAAIPYFGYARQDRRPRSARVAISAKIVANML CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHEEEEHHHHHHHHH EIAGVERIITMDLHADQIQGFFDIPVDNIYATPVLLGDLRKQNYENLLVVSPDVGGVVRA HHHCCCEEEEEECCHHHHCCEEECCCCCEEECHHHHHHHHHCCCCCEEEECCCCCHHHHH RALAKQLNCDLAIIDKRRPKANVAEVMNIIGEVEGRTCVIMDDMVDTAGTLCKAAQVLKE HHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHH RGAKQVFAYATHPVLSGGAGERIAASALDELVVTDTIPLGEEARSCAKIRSLTSAGLLAE CCCHHEEHEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH TFSRIRRGDSVMSLFAES HHHHHHCCHHHHHHHHCC >Mature Secondary Structure SSHDGLMVFTGNANPALAQEVVKILGIPLGKAMVSRFSDGEIQVEIQENVRGKDVFVLQ CCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEECCCCCCEEEEEE STCAPANDNLMELMIMVDALKRASAGRITAAIPYFGYARQDRRPRSARVAISAKIVANML CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHEEEEHHHHHHHHH EIAGVERIITMDLHADQIQGFFDIPVDNIYATPVLLGDLRKQNYENLLVVSPDVGGVVRA HHHCCCEEEEEECCHHHHCCEEECCCCCEEECHHHHHHHHHCCCCCEEEECCCCCHHHHH RALAKQLNCDLAIIDKRRPKANVAEVMNIIGEVEGRTCVIMDDMVDTAGTLCKAAQVLKE HHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHH RGAKQVFAYATHPVLSGGAGERIAASALDELVVTDTIPLGEEARSCAKIRSLTSAGLLAE CCCHHEEHEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH TFSRIRRGDSVMSLFAES HHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]