| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781682
Identifier: 91781682
GI number: 91781682
Start: 331487
End: 332149
Strand: Direct
Name: 91781682
Synonym: Bxe_A4164
Alternate gene names: NA
Gene position: 331487-332149 (Clockwise)
Preceding gene: 91781681
Following gene: 91781683
Centisome position: 6.77
GC content: 62.59
Gene sequence:
>663_bases GTGTCGACGCAATCTCCCCGTTCGCCGCAAGCCGGCAAACCCGCCGCACCCAAAGTCATGCCCGGCCAGCCCAACGGCAA AGGCTCGTGGGAGCGCGGCCGCTGGATCCTGCTGCTGCTCGCGATCATCTGCGCCGCGCCGATCGCCGTGTCGTATTTCA CGTACTACGTGATCAAGCCGACCGGCGGCAGCACGAGCTACGGCACGCTGGTCGAACCGCAACGCCCGATTCCCGATTCG CTCGTGGTCACGGGCGAAGACGGCAAGCCCGTCAAGTTCGCCACCCTGCGCGGCCACTGGCTGTTGATCTCGGTCGACAA CACTGCATGCGACAAGGCGTGCGTCACCAAGCTCTACTTCATGCGACAAATCCGCGCAGCTCAGGGCCCGGAACGCGAGC GCGTCGTGGAAGTGTGGTTGCGCACCGATGCAGGCAACGTCGCAGACGTGATACAAAAGGCCTATCCCGACACCAACATG ATGATCGCCGATCCGGCGCAGGTGGCCGCGTGGCTGCCTACGGAGAGCGGCACGAAAATCACCGACCACATCTACATGGT CGATCCGAACGGCAACCTGATGATGCGATTCCCGAAAGATCCGAACCCCAGCAAGATCAAGGGCGACGTGACCAAGCTGC TCAAATGGTCGAGTATCGGCTGA
Upstream 100 bases:
>100_bases CGCGAAGAAAGAGCACGCGCCGGGCGTGTAACGCAGCCCATGCGGCTTCGCGGCCAGAGCCGGGCCGCGAAGCCGTGCAA TCAATGAAAGAGGTCCTGTA
Downstream 100 bases:
>100_bases TGCCGCAACCTGGGTAAAAGAGATGTTCGTACTGCAACTGGCTTTGATCGGCTTGTGTATCGCGTTGTTGCCGCTGTCCT ACGTGTGGGTCAAGGCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Sco1/SenC Family Cytochrome Oxidase Assembly Protein
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSTQSPRSPQAGKPAAPKVMPGQPNGKGSWERGRWILLLLAIICAAPIAVSYFTYYVIKPTGGSTSYGTLVEPQRPIPDS LVVTGEDGKPVKFATLRGHWLLISVDNTACDKACVTKLYFMRQIRAAQGPERERVVEVWLRTDAGNVADVIQKAYPDTNM MIADPAQVAAWLPTESGTKITDHIYMVDPNGNLMMRFPKDPNPSKIKGDVTKLLKWSSIG
Sequences:
>Translated_220_residues MSTQSPRSPQAGKPAAPKVMPGQPNGKGSWERGRWILLLLAIICAAPIAVSYFTYYVIKPTGGSTSYGTLVEPQRPIPDS LVVTGEDGKPVKFATLRGHWLLISVDNTACDKACVTKLYFMRQIRAAQGPERERVVEVWLRTDAGNVADVIQKAYPDTNM MIADPAQVAAWLPTESGTKITDHIYMVDPNGNLMMRFPKDPNPSKIKGDVTKLLKWSSIG >Mature_219_residues STQSPRSPQAGKPAAPKVMPGQPNGKGSWERGRWILLLLAIICAAPIAVSYFTYYVIKPTGGSTSYGTLVEPQRPIPDSL VVTGEDGKPVKFATLRGHWLLISVDNTACDKACVTKLYFMRQIRAAQGPERERVVEVWLRTDAGNVADVIQKAYPDTNMM IADPAQVAAWLPTESGTKITDHIYMVDPNGNLMMRFPKDPNPSKIKGDVTKLLKWSSIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24127; Mature: 23996
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQSPRSPQAGKPAAPKVMPGQPNGKGSWERGRWILLLLAIICAAPIAVSYFTYYVIKP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEEEEE TGGSTSYGTLVEPQRPIPDSLVVTGEDGKPVKFATLRGHWLLISVDNTACDKACVTKLYF CCCCCCCCEECCCCCCCCCCEEEECCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHH MRQIRAAQGPERERVVEVWLRTDAGNVADVIQKAYPDTNMMIADPAQVAAWLPTESGTKI HHHHHHHCCCCHHHEEEEEEECCCCCHHHHHHHHCCCCCEEEECHHHEEEECCCCCCCEE TDHIYMVDPNGNLMMRFPKDPNPSKIKGDVTKLLKWSSIG EEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure STQSPRSPQAGKPAAPKVMPGQPNGKGSWERGRWILLLLAIICAAPIAVSYFTYYVIKP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEEEEE TGGSTSYGTLVEPQRPIPDSLVVTGEDGKPVKFATLRGHWLLISVDNTACDKACVTKLYF CCCCCCCCEECCCCCCCCCCEEEECCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHH MRQIRAAQGPERERVVEVWLRTDAGNVADVIQKAYPDTNMMIADPAQVAAWLPTESGTKI HHHHHHHCCCCHHHEEEEEEECCCCCHHHHHHHHCCCCCEEEECHHHEEEECCCCCCCEE TDHIYMVDPNGNLMMRFPKDPNPSKIKGDVTKLLKWSSIG EEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA