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The map label for this gene is ctaC [H]

Identifier: 91781675

GI number: 91781675

Start: 324804

End: 326420

Strand: Direct

Name: ctaC [H]

Synonym: Bxe_A4171

Alternate gene names: 91781675

Gene position: 324804-326420 (Clockwise)

Preceding gene: 91781674

Following gene: 91781676

Centisome position: 6.63

GC content: 62.52

Gene sequence:

>1617_bases
ATGGAAATTTTGGGTAAGGAAGCTATGAAAACAATCAAGCGAGCCCTCATGGGCGTGCTGGCGATGAGCGGACTGCTTTT
CGCCGGTGCCGCCCTGGCAGTGGGCGATGTTCCGGGCGGCCCTGCCGTCAACGAGATCAATCTCCAGCCGCCTGCGACGA
AAATCGCTGAGGAGCTCTTCAGCCTCCACATGTTCATGCTGGTGCTTTGCACGGTGATTTTCGTCGGCGTGTTCGCCGTG
ATGTTCTATTCGATCTTTGCCCACCGCAAATCGAAAGGCCACAAGGCTTCGAATTTCCACGAAAGCACCACCGTCGAAAT
CATCTGGACGATCGTGCCGTTCATCATCGTGGTGTTGATGGCGCTGCCCGCCACCAAGACCGTCGTCGCGATGAAAGACA
CCACGAATGCCGACCTCACCATCAAGGTCACCGGCTATCAGTGGAAATGGGGCTACGACTACGTGAAGGGCCCGGGCGAA
GGCATCAGCTTCCTGTCCACGCTGGCCACGCCGCGTGCGGAAACCGACGGTCGCCAGCCGATCTCCACCACATATCTGCA
GGAAGTCGACAATCCGCTGGTCGTTCCGGTCGACAAGAAAATCCGCATCATCACCACCGCGAACGACGTGGTCCACTCCT
GGTACGTGCCGGCTTTCGGCGTGAAGCAGGACGCGATTCCGGGTTTCGTGCGCGACACGTGGTTCAAGGCTGAGAAGGTC
GGCACGTTCCGGGGCTTCTGTACCGAACTGTGCGGCAAGGAACACGCGTTCATGCCGGTGGTGGTCGAAGTGCTGTCCGC
CGACGACTACGCGAAGTGGGTCGACGCGCAGAAGAAGAAAATGGCCGCCGGCCAGGACGATCCGAACAAGACCTACACGA
TGGCCGAGTTGATGGAACGCGGCGGCAAGGTGTACGCGGCGAACTGCGCGGTCTGCCACCAGCCGACCGGCAAGGGTGCA
GGCGCATTCCCGGCGCTCGACGGCAGCAAGATCGCCAACGGTCCGATCGCCGAGCACGTCAGCCTGGTGCTGAAGGGCAA
GAACGCGATGCCTTCGTGGGCGCCTACGCTGAACGACGTCGAAATCGCCTCGGTCATCACGTACGAACGTAATTCGTGGG
GCAACCACACCGGCGACATTCTCCAGCCCAAGCAGGTTGCGGACGCGCGTAACGGCAAGCTGCCGGAAGGCGGCAACCAT
CTGGCCGACGCGGGCGCGGCAGCGAGCGGTGCAGAGGCGGCTTCGGGCGCCTCGGGTGCGGAAACGGCAGCGGCCGGCTC
GGACAGCGCGGCAGCGCAGGCAACACTTCCGGCCAGCATCTACTTCGACACTGGCAAGAGCACGCTGCCGGCCGAGGCGA
AAGCGGCGGTCGAGGCGGCCGCGGCCTACGCGAAGTCGCATCCGGACGCGAAATTCACGCTGTCGGGCTTCACCGACGCC
ACCGGTTCCGCGGACCTCAACGCGAAACTCGCGAAGAGCCGTGCCGAAGCCGTGCGCGACGCGTTGAAAGCAGCCGGCAT
TGCCGAAGACCATATTATTTTGAAGAAGCCGGAAACGATCACGGGCGGCAGCGACGCGAAAGAAGCCCGGCGTGTTCAGA
TCAGCCCGGCTGCCTGA

Upstream 100 bases:

>100_bases
AGGCGAATTGCGTATGTGGCTCACACGTTGTTAGACGTGTTGAGAGGCGCGGCGTTCACGGGGAGCGCGAGGCAACCTGC
CAGCGGGGTCGAGGGTTTGA

Downstream 100 bases:

>100_bases
CGTGTTCATGGTCAGCACCGCAGTATTCGCTTTAGGAGATTGTCATGTCTAGCATCGGACACGATGTAGTCGCGGGCCAC
GAGCACGTGCACGGCGACCA

Product: putative cytochrome c oxidase

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II; Oxidase aa(3) subunit 2 [H]

Number of amino acids: Translated: 538; Mature: 538

Protein sequence:

>538_residues
MEILGKEAMKTIKRALMGVLAMSGLLFAGAALAVGDVPGGPAVNEINLQPPATKIAEELFSLHMFMLVLCTVIFVGVFAV
MFYSIFAHRKSKGHKASNFHESTTVEIIWTIVPFIIVVLMALPATKTVVAMKDTTNADLTIKVTGYQWKWGYDYVKGPGE
GISFLSTLATPRAETDGRQPISTTYLQEVDNPLVVPVDKKIRIITTANDVVHSWYVPAFGVKQDAIPGFVRDTWFKAEKV
GTFRGFCTELCGKEHAFMPVVVEVLSADDYAKWVDAQKKKMAAGQDDPNKTYTMAELMERGGKVYAANCAVCHQPTGKGA
GAFPALDGSKIANGPIAEHVSLVLKGKNAMPSWAPTLNDVEIASVITYERNSWGNHTGDILQPKQVADARNGKLPEGGNH
LADAGAAASGAEAASGASGAETAAAGSDSAAAQATLPASIYFDTGKSTLPAEAKAAVEAAAAYAKSHPDAKFTLSGFTDA
TGSADLNAKLAKSRAEAVRDALKAAGIAEDHIILKKPETITGGSDAKEARRVQISPAA

Sequences:

>Translated_538_residues
MEILGKEAMKTIKRALMGVLAMSGLLFAGAALAVGDVPGGPAVNEINLQPPATKIAEELFSLHMFMLVLCTVIFVGVFAV
MFYSIFAHRKSKGHKASNFHESTTVEIIWTIVPFIIVVLMALPATKTVVAMKDTTNADLTIKVTGYQWKWGYDYVKGPGE
GISFLSTLATPRAETDGRQPISTTYLQEVDNPLVVPVDKKIRIITTANDVVHSWYVPAFGVKQDAIPGFVRDTWFKAEKV
GTFRGFCTELCGKEHAFMPVVVEVLSADDYAKWVDAQKKKMAAGQDDPNKTYTMAELMERGGKVYAANCAVCHQPTGKGA
GAFPALDGSKIANGPIAEHVSLVLKGKNAMPSWAPTLNDVEIASVITYERNSWGNHTGDILQPKQVADARNGKLPEGGNH
LADAGAAASGAEAASGASGAETAAAGSDSAAAQATLPASIYFDTGKSTLPAEAKAAVEAAAAYAKSHPDAKFTLSGFTDA
TGSADLNAKLAKSRAEAVRDALKAAGIAEDHIILKKPETITGGSDAKEARRVQISPAA
>Mature_538_residues
MEILGKEAMKTIKRALMGVLAMSGLLFAGAALAVGDVPGGPAVNEINLQPPATKIAEELFSLHMFMLVLCTVIFVGVFAV
MFYSIFAHRKSKGHKASNFHESTTVEIIWTIVPFIIVVLMALPATKTVVAMKDTTNADLTIKVTGYQWKWGYDYVKGPGE
GISFLSTLATPRAETDGRQPISTTYLQEVDNPLVVPVDKKIRIITTANDVVHSWYVPAFGVKQDAIPGFVRDTWFKAEKV
GTFRGFCTELCGKEHAFMPVVVEVLSADDYAKWVDAQKKKMAAGQDDPNKTYTMAELMERGGKVYAANCAVCHQPTGKGA
GAFPALDGSKIANGPIAEHVSLVLKGKNAMPSWAPTLNDVEIASVITYERNSWGNHTGDILQPKQVADARNGKLPEGGNH
LADAGAAASGAEAASGASGAETAAAGSDSAAAQATLPASIYFDTGKSTLPAEAKAAVEAAAAYAKSHPDAKFTLSGFTDA
TGSADLNAKLAKSRAEAVRDALKAAGIAEDHIILKKPETITGGSDAKEARRVQISPAA

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Homo sapiens, GI251831110, Length=221, Percent_Identity=35.2941176470588, Blast_Score=141, Evalue=2e-33,
Organism=Saccharomyces cerevisiae, GI6226540, Length=250, Percent_Identity=31.6, Blast_Score=133, Evalue=6e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR014222
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2; PF02790 COX2_TM [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 56825; Mature: 56825

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: PS00078 COX2 ; PS50999 COX2_TM ; PS50857 COX2_CUA ; PS51007 CYTC ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEILGKEAMKTIKRALMGVLAMSGLLFAGAALAVGDVPGGPAVNEINLQPPATKIAEELF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEECCCCCHHHHHHHHH
SLHMFMLVLCTVIFVGVFAVMFYSIFAHRKSKGHKASNFHESTTVEIIWTIVPFIIVVLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ALPATKTVVAMKDTTNADLTIKVTGYQWKWGYDYVKGPGEGISFLSTLATPRAETDGRQP
HCCCCCEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
ISTTYLQEVDNPLVVPVDKKIRIITTANDVVHSWYVPAFGVKQDAIPGFVRDTWFKAEKV
HHHHHHHHCCCCEEEECCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
GTFRGFCTELCGKEHAFMPVVVEVLSADDYAKWVDAQKKKMAAGQDDPNKTYTMAELMER
HHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHC
GGKVYAANCAVCHQPTGKGAGAFPALDGSKIANGPIAEHVSLVLKGKNAMPSWAPTLNDV
CCEEEEECEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEECCCCCCCCCCCCCCE
EIASVITYERNSWGNHTGDILQPKQVADARNGKLPEGGNHLADAGAAASGAEAASGASGA
EEEHEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCC
ETAAAGSDSAAAQATLPASIYFDTGKSTLPAEAKAAVEAAAAYAKSHPDAKFTLSGFTDA
CHHCCCCCCCCHHEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCC
TGSADLNAKLAKSRAEAVRDALKAAGIAEDHIILKKPETITGGSDAKEARRVQISPAA
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCC
>Mature Secondary Structure
MEILGKEAMKTIKRALMGVLAMSGLLFAGAALAVGDVPGGPAVNEINLQPPATKIAEELF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEECCCCCHHHHHHHHH
SLHMFMLVLCTVIFVGVFAVMFYSIFAHRKSKGHKASNFHESTTVEIIWTIVPFIIVVLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ALPATKTVVAMKDTTNADLTIKVTGYQWKWGYDYVKGPGEGISFLSTLATPRAETDGRQP
HCCCCCEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
ISTTYLQEVDNPLVVPVDKKIRIITTANDVVHSWYVPAFGVKQDAIPGFVRDTWFKAEKV
HHHHHHHHCCCCEEEECCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
GTFRGFCTELCGKEHAFMPVVVEVLSADDYAKWVDAQKKKMAAGQDDPNKTYTMAELMER
HHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHC
GGKVYAANCAVCHQPTGKGAGAFPALDGSKIANGPIAEHVSLVLKGKNAMPSWAPTLNDV
CCEEEEECEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEECCCCCCCCCCCCCCE
EIASVITYERNSWGNHTGDILQPKQVADARNGKLPEGGNHLADAGAAASGAEAASGASGA
EEEHEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCC
ETAAAGSDSAAAQATLPASIYFDTGKSTLPAEAKAAVEAAAAYAKSHPDAKFTLSGFTDA
CHHCCCCCCCCHHEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCC
TGSADLNAKLAKSRAEAVRDALKAAGIAEDHIILKKPETITGGSDAKEARRVQISPAA
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1648008 [H]