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The map label for this gene is ydcU [C]

Identifier: 91781646

GI number: 91781646

Start: 294977

End: 295915

Strand: Direct

Name: ydcU [C]

Synonym: Bxe_A4200

Alternate gene names: 91781646

Gene position: 294977-295915 (Clockwise)

Preceding gene: 91781645

Following gene: 91781647

Centisome position: 6.03

GC content: 64.0

Gene sequence:

>939_bases
ATGAGCGCTTCATCGGATGCCGGGTCGGTGCAGCCGGAATTGCTGGTTCCGCCTGTACCCAGCCCAACGCCTCGCGTCGA
CGGTCCGGGGCGCGCGTCGCAGTTCCTCGCGTGGATCGGCGTGGTGCCGTTCTTTACCTTCGCGCTGCTGTTCCTGATTC
TGCCGACCGGCTTCCTGATGGTCGGCGCGTTCCAGGATTCGCAAGGCCACTTCACGCTCGCCAATTTCCGCGACCTGCTC
CAGCCGACCGTGATGGACGCATACTGGATCAGCTTCAAGGTGAGCGCCGCCTCGTCGCTCGGCGGTGCGGTGATCGGTTC
GCTGCTCGCCTGGGCGGCGGTGCAGGGCAAACTGCCGGGCTGGATTCGCCCGACCTTGATGACGTTCTCCGGTGTCGCGT
CGAACTTTGCCGGCGTGCCGCTCGCGTTCGCTTTCATCTGCACACTGGGCCGCGTCGGGCTCGTCACCGTGTTGCTGAAG
AAATACCTCGGCTTCAATCTGTACTCGACGGGCTTCAGCATCCTGAGTTTTTCAGGTCTGACGCTGACCTACCTGTATTT
CCAGATTCCCCTGATGGTGCTGATCGTCACGCCTGCGCTCGACGGCCTGAAGCGCGAATGGCGCGAGGCCTGCGATTGCC
TCGGCGGCACCGCGTTTCAATACTGGCGCTACGTCGCGCTGCCGGTGCTGTGGCCGAGCGTGCTCGGCGCCGCGCTGCTG
CTGTTCGCCAATTCGTTCGGTGCGGTCGCGACGGCTTACGCGCTGACCGGCAGTTCGCTGAACATCGTCACGATCCTGCT
GTACGCGCAGATTCGTGGCGACGTGATGCATAACCAGAATCTCGGCTACGCACTCGCGCTCGGCATGGTGCTCGTTACCG
GCCTCTCGAATGGCGGCTACATCTGGCTGCGCTCGCGCGCTGAAAGGGGGCGCCGATGA

Upstream 100 bases:

>100_bases
ACAAAAAACGCAGCATGAAGTTTTGCCGCACCGGCGCGCCGCTGCTCGTGATGAGCGCAGCGCGCCGGGTGCGTTTGCCA
GATTGCCCCAAGGGTGAGCT

Downstream 100 bases:

>100_bases
AGAGCCAATCGCGCGTGGGTGCGTGGACCGCGATGATCGTCGGTTCGCTGTACTTTCTGATTCCGTTGATCGCGACGTTC
GAGTTCAGCTTGCGCATGAA

Product: ABC spermidine/putrescine transporter, innermembrane subunit

Products: NA

Alternate protein names: ABC Transporter Permease Protein; ABC Transporter; ABC Transporter Membrane Spanning Protein; Transmembrane Component Of ABC Transporter; Permease Of ABC Transporter; Polyamine ABC Transporter Permease Protein; Acriflavin Resistance Protein; Permease; Sulfate ABC Transporter Permease Protein; ABC-Type Transporter Permease Component; Sulfate ABC Transporter Inner Membrane Subunit CysT; ABC Transport System Permease Protein; ABC-Type Transport System Permease Protein; ABC Trasnporter Integral Membrane Subunit; ABC Transporter, Permease Component Fragment; ABC Transporter Permease Component; ABC Transport System Membrane Protein; Spermidine/Putrescine ABC Transporter Permease Protein

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MSASSDAGSVQPELLVPPVPSPTPRVDGPGRASQFLAWIGVVPFFTFALLFLILPTGFLMVGAFQDSQGHFTLANFRDLL
QPTVMDAYWISFKVSAASSLGGAVIGSLLAWAAVQGKLPGWIRPTLMTFSGVASNFAGVPLAFAFICTLGRVGLVTVLLK
KYLGFNLYSTGFSILSFSGLTLTYLYFQIPLMVLIVTPALDGLKREWREACDCLGGTAFQYWRYVALPVLWPSVLGAALL
LFANSFGAVATAYALTGSSLNIVTILLYAQIRGDVMHNQNLGYALALGMVLVTGLSNGGYIWLRSRAERGRR

Sequences:

>Translated_312_residues
MSASSDAGSVQPELLVPPVPSPTPRVDGPGRASQFLAWIGVVPFFTFALLFLILPTGFLMVGAFQDSQGHFTLANFRDLL
QPTVMDAYWISFKVSAASSLGGAVIGSLLAWAAVQGKLPGWIRPTLMTFSGVASNFAGVPLAFAFICTLGRVGLVTVLLK
KYLGFNLYSTGFSILSFSGLTLTYLYFQIPLMVLIVTPALDGLKREWREACDCLGGTAFQYWRYVALPVLWPSVLGAALL
LFANSFGAVATAYALTGSSLNIVTILLYAQIRGDVMHNQNLGYALALGMVLVTGLSNGGYIWLRSRAERGRR
>Mature_311_residues
SASSDAGSVQPELLVPPVPSPTPRVDGPGRASQFLAWIGVVPFFTFALLFLILPTGFLMVGAFQDSQGHFTLANFRDLLQ
PTVMDAYWISFKVSAASSLGGAVIGSLLAWAAVQGKLPGWIRPTLMTFSGVASNFAGVPLAFAFICTLGRVGLVTVLLKK
YLGFNLYSTGFSILSFSGLTLTYLYFQIPLMVLIVTPALDGLKREWREACDCLGGTAFQYWRYVALPVLWPSVLGAALLL
FANSFGAVATAYALTGSSLNIVTILLYAQIRGDVMHNQNLGYALALGMVLVTGLSNGGYIWLRSRAERGRR

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Ydcstuv; Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: COG4132

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33567; Mature: 33436

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASSDAGSVQPELLVPPVPSPTPRVDGPGRASQFLAWIGVVPFFTFALLFLILPTGFLM
CCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
VGAFQDSQGHFTLANFRDLLQPTVMDAYWISFKVSAASSLGGAVIGSLLAWAAVQGKLPG
EEEEECCCCCEEHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHCCCCCC
WIRPTLMTFSGVASNFAGVPLAFAFICTLGRVGLVTVLLKKYLGFNLYSTGFSILSFSGL
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHCCCH
TLTYLYFQIPLMVLIVTPALDGLKREWREACDCLGGTAFQYWRYVALPVLWPSVLGAALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LFANSFGAVATAYALTGSSLNIVTILLYAQIRGDVMHNQNLGYALALGMVLVTGLSNGGY
HHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCE
IWLRSRAERGRR
EEEECCCCCCCC
>Mature Secondary Structure 
SASSDAGSVQPELLVPPVPSPTPRVDGPGRASQFLAWIGVVPFFTFALLFLILPTGFLM
CCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE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EEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA