Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is 91781626

Identifier: 91781626

GI number: 91781626

Start: 277807

End: 278130

Strand: Direct

Name: 91781626

Synonym: Bxe_A4220

Alternate gene names: NA

Gene position: 277807-278130 (Clockwise)

Preceding gene: 91781625

Following gene: 91781627

Centisome position: 5.67

GC content: 57.72

Gene sequence:

>324_bases
ATGGACTCCTTCTACAAGTACCACGTCTTCTTCTGTCTCAATCAGCGCGAGCCCGGCGCCGAGCGCCCGAGTTGCGCGAA
TTGCAATGCGCAGGAGATGCAGGAGCATGCAAAAAAACGCGTGAAAAAACTCGGTCTCGCAGGTCCGGGCCAGGTGCGCA
TCAACAAGGCCGGTTGCCTCGACCGCTGCGAGCTCGGCCCGGCGCTCGTCGTGTATCCGGAAGGCGTCTGGTACACGTAT
GTCGACGAGAGCGACATCGACGAAATCGTCGACTCGCATCTCGTGAACGGCAAGATTGTCGAGCGTCTGAAAATCGATCA
ATAA

Upstream 100 bases:

>100_bases
AGCGACCGGCGGTCCCGCTCGTTATAATCGTTCGCACAACAGGCGCGCCGCTGTGCATCCAGCGCCATTCTCACCCTGGC
AGTTTCGCCCCCCGGACATC

Downstream 100 bases:

>100_bases
GCCTCGCCATGAATGCCTATACGAAGAAATATCTGATCGACGGCCCGGTCGGCAAGATCGAGGTCGCGGTGGATCTGCCC
GACGAGACGCGCGAAAGCGG

Product: putative ferredoxin

Products: NA

Alternate protein names: 2FeCpFd [H]

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MDSFYKYHVFFCLNQREPGAERPSCANCNAQEMQEHAKKRVKKLGLAGPGQVRINKAGCLDRCELGPALVVYPEGVWYTY
VDESDIDEIVDSHLVNGKIVERLKIDQ

Sequences:

>Translated_107_residues
MDSFYKYHVFFCLNQREPGAERPSCANCNAQEMQEHAKKRVKKLGLAGPGQVRINKAGCLDRCELGPALVVYPEGVWYTY
VDESDIDEIVDSHLVNGKIVERLKIDQ
>Mature_107_residues
MDSFYKYHVFFCLNQREPGAERPSCANCNAQEMQEHAKKRVKKLGLAGPGQVRINKAGCLDRCELGPALVVYPEGVWYTY
VDESDIDEIVDSHLVNGKIVERLKIDQ

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG3411

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 2Fe2S Shethna-type ferredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002023
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01257 Complex1_24kDa [H]

EC number: NA

Molecular weight: Translated: 12144; Mature: 12144

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSFYKYHVFFCLNQREPGAERPSCANCNAQEMQEHAKKRVKKLGLAGPGQVRINKAGCL
CCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
DRCELGPALVVYPEGVWYTYVDESDIDEIVDSHLVNGKIVERLKIDQ
CCCCCCCEEEEECCCEEEEEECCCCHHHHHHHHCCCCHHHHEEECCC
>Mature Secondary Structure
MDSFYKYHVFFCLNQREPGAERPSCANCNAQEMQEHAKKRVKKLGLAGPGQVRINKAGCL
CCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
DRCELGPALVVYPEGVWYTYVDESDIDEIVDSHLVNGKIVERLKIDQ
CCCCCCCEEEEECCCEEEEEECCCCHHHHHHHHCCCCHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3790505; 7916603; 8334159; 8392833 [H]