| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781626
Identifier: 91781626
GI number: 91781626
Start: 277807
End: 278130
Strand: Direct
Name: 91781626
Synonym: Bxe_A4220
Alternate gene names: NA
Gene position: 277807-278130 (Clockwise)
Preceding gene: 91781625
Following gene: 91781627
Centisome position: 5.67
GC content: 57.72
Gene sequence:
>324_bases ATGGACTCCTTCTACAAGTACCACGTCTTCTTCTGTCTCAATCAGCGCGAGCCCGGCGCCGAGCGCCCGAGTTGCGCGAA TTGCAATGCGCAGGAGATGCAGGAGCATGCAAAAAAACGCGTGAAAAAACTCGGTCTCGCAGGTCCGGGCCAGGTGCGCA TCAACAAGGCCGGTTGCCTCGACCGCTGCGAGCTCGGCCCGGCGCTCGTCGTGTATCCGGAAGGCGTCTGGTACACGTAT GTCGACGAGAGCGACATCGACGAAATCGTCGACTCGCATCTCGTGAACGGCAAGATTGTCGAGCGTCTGAAAATCGATCA ATAA
Upstream 100 bases:
>100_bases AGCGACCGGCGGTCCCGCTCGTTATAATCGTTCGCACAACAGGCGCGCCGCTGTGCATCCAGCGCCATTCTCACCCTGGC AGTTTCGCCCCCCGGACATC
Downstream 100 bases:
>100_bases GCCTCGCCATGAATGCCTATACGAAGAAATATCTGATCGACGGCCCGGTCGGCAAGATCGAGGTCGCGGTGGATCTGCCC GACGAGACGCGCGAAAGCGG
Product: putative ferredoxin
Products: NA
Alternate protein names: 2FeCpFd [H]
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MDSFYKYHVFFCLNQREPGAERPSCANCNAQEMQEHAKKRVKKLGLAGPGQVRINKAGCLDRCELGPALVVYPEGVWYTY VDESDIDEIVDSHLVNGKIVERLKIDQ
Sequences:
>Translated_107_residues MDSFYKYHVFFCLNQREPGAERPSCANCNAQEMQEHAKKRVKKLGLAGPGQVRINKAGCLDRCELGPALVVYPEGVWYTY VDESDIDEIVDSHLVNGKIVERLKIDQ >Mature_107_residues MDSFYKYHVFFCLNQREPGAERPSCANCNAQEMQEHAKKRVKKLGLAGPGQVRINKAGCLDRCELGPALVVYPEGVWYTY VDESDIDEIVDSHLVNGKIVERLKIDQ
Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]
COG id: COG3411
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 2Fe2S Shethna-type ferredoxin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002023 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01257 Complex1_24kDa [H]
EC number: NA
Molecular weight: Translated: 12144; Mature: 12144
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSFYKYHVFFCLNQREPGAERPSCANCNAQEMQEHAKKRVKKLGLAGPGQVRINKAGCL CCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC DRCELGPALVVYPEGVWYTYVDESDIDEIVDSHLVNGKIVERLKIDQ CCCCCCCEEEEECCCEEEEEECCCCHHHHHHHHCCCCHHHHEEECCC >Mature Secondary Structure MDSFYKYHVFFCLNQREPGAERPSCANCNAQEMQEHAKKRVKKLGLAGPGQVRINKAGCL CCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC DRCELGPALVVYPEGVWYTYVDESDIDEIVDSHLVNGKIVERLKIDQ CCCCCCCEEEEECCCEEEEEECCCCHHHHHHHHCCCCHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3790505; 7916603; 8334159; 8392833 [H]