| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781612
Identifier: 91781612
GI number: 91781612
Start: 265326
End: 266558
Strand: Direct
Name: 91781612
Synonym: Bxe_A4234
Alternate gene names: NA
Gene position: 265326-266558 (Clockwise)
Preceding gene: 91781611
Following gene: 91781613
Centisome position: 5.42
GC content: 65.04
Gene sequence:
>1233_bases ATGCCGCAAATCGAATCCCTTGAACCTCGAACCCGGCGCGCTCGCGTGTCGAATCTGCGCCTCGATCAATCGCGCGACCG GCTCGCGCGCCGTGCCGTGGCGTTATGCGCGGCACTCGCCGGCCTGTTGCCCGGCATTGCACTGGCGCAGGTGAAAATCG GCCTCGTGCTGTCGCTGACCGGGCCGGCCGCTTCGCTCGGCATTCCCGCGCGCGATACGGTCGCGCTGCTGCCCAGGCAG ATCGGCGGGCAGAGTGTCGAATACATCGTGCTCGACGACGCGTCCGATACCACCCAGGCCGTGCAGGACACCAAGAAGCT GATCTCCGAGAATCACGTCGACGCGATCATCGGCTCGTCGATCACGCCGAATTCGCTGGCGATGATCGACGTGGTTGCCG AAGGTGAAACGCCGATGATCTCGCTGGCGTCGTCGGCGAAAATCATCGAGCCCGTGGATGCGAAACGCCACTGGGTCTTC AAGACGCCGCAGACCGACGCGATGATGGCGTCGGCGATCGCCGAACACGCCAGCCTGCATGGCGTCAAAACCATCGCGTT CATCGGCCAGGCCGACGCGCTGGGCGAAACTTTTTACACCGAGGTCGCGAAGTTCGCGCAACTGCATCACATCGATATGG TGGCGAGCGAGCGCTTCAATCGCACCGATCCGAGCGTGACCGGCCAGGTCCTCAAGATTCTGGCGACGCATCCCGATGCG GTAGTGGTCGGCGCGGCCGGCACGCCCGCCGCGTTGCCGCCGAAGACGCTCCGGGAACGCGGCTACAAAGGGCTGATCTA TCACAATCATGGGGTCGGCAATAACGACTTCCTGCGCGTGTGCGGCGCGGATTGCAACGGCACCTTCCTGCCCGCGAGTC CGGTGCTGGTCGCCGCCCAATTGCCGGCGGATCATCCGGCCAAGCGGCTCGCACTCGATTACATCGCGCGTTTCGAAGCG GTGCGCGGCGCTGGCAGCGTGTCGGCCTTCGGCTCGTACACGTGGGACGCGGGCATGCTGCTCGGCCATGCGGTACCGGT CGCGCTGAAGACTGCCGCACCGGGCACGCCGGAATTTCGCCGCGCGCTGCGCGATGCGCTCGAGTCGACGCGAGGTCTCG CGGATACCAACGGTGTCGTCAACATGAGCGCGACGGACCATCTCGGGCTCGATCAACGGGCGCGTGTGATGGTCGAAATC AGGAATGCGAAGTGGGTTTATCAGCCGCGCTGA
Upstream 100 bases:
>100_bases CAGGCGCGCCGCGAAGCAGCGTAGGAAAGGCACGTGAACCGTGCACGGGCAAGTCCATCGGCAGCACATCAAAACGAAAA ACCGACGTGAGGAGACAAGC
Downstream 100 bases:
>100_bases AACGAGCGGGCGCACGCGCTTTCCAGGAAAACGCCACCCCGTCCAACGGATACACCGACACCGATTTACGGATTGCTGAT CATGTCTCAGACACCACACG
Product: branched chain amino acid ABC transporter periplasmic ligand-binding protein
Products: NA
Alternate protein names: Branched-Chain Amino Acid ABC Transporter; Branched-Chain Amino Acid Transporter; Amino Acid ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MPQIESLEPRTRRARVSNLRLDQSRDRLARRAVALCAALAGLLPGIALAQVKIGLVLSLTGPAASLGIPARDTVALLPRQ IGGQSVEYIVLDDASDTTQAVQDTKKLISENHVDAIIGSSITPNSLAMIDVVAEGETPMISLASSAKIIEPVDAKRHWVF KTPQTDAMMASAIAEHASLHGVKTIAFIGQADALGETFYTEVAKFAQLHHIDMVASERFNRTDPSVTGQVLKILATHPDA VVVGAAGTPAALPPKTLRERGYKGLIYHNHGVGNNDFLRVCGADCNGTFLPASPVLVAAQLPADHPAKRLALDYIARFEA VRGAGSVSAFGSYTWDAGMLLGHAVPVALKTAAPGTPEFRRALRDALESTRGLADTNGVVNMSATDHLGLDQRARVMVEI RNAKWVYQPR
Sequences:
>Translated_410_residues MPQIESLEPRTRRARVSNLRLDQSRDRLARRAVALCAALAGLLPGIALAQVKIGLVLSLTGPAASLGIPARDTVALLPRQ IGGQSVEYIVLDDASDTTQAVQDTKKLISENHVDAIIGSSITPNSLAMIDVVAEGETPMISLASSAKIIEPVDAKRHWVF KTPQTDAMMASAIAEHASLHGVKTIAFIGQADALGETFYTEVAKFAQLHHIDMVASERFNRTDPSVTGQVLKILATHPDA VVVGAAGTPAALPPKTLRERGYKGLIYHNHGVGNNDFLRVCGADCNGTFLPASPVLVAAQLPADHPAKRLALDYIARFEA VRGAGSVSAFGSYTWDAGMLLGHAVPVALKTAAPGTPEFRRALRDALESTRGLADTNGVVNMSATDHLGLDQRARVMVEI RNAKWVYQPR >Mature_409_residues PQIESLEPRTRRARVSNLRLDQSRDRLARRAVALCAALAGLLPGIALAQVKIGLVLSLTGPAASLGIPARDTVALLPRQI GGQSVEYIVLDDASDTTQAVQDTKKLISENHVDAIIGSSITPNSLAMIDVVAEGETPMISLASSAKIIEPVDAKRHWVFK TPQTDAMMASAIAEHASLHGVKTIAFIGQADALGETFYTEVAKFAQLHHIDMVASERFNRTDPSVTGQVLKILATHPDAV VVGAAGTPAALPPKTLRERGYKGLIYHNHGVGNNDFLRVCGADCNGTFLPASPVLVAAQLPADHPAKRLALDYIARFEAV RGAGSVSAFGSYTWDAGMLLGHAVPVALKTAAPGTPEFRRALRDALESTRGLADTNGVVNMSATDHLGLDQRARVMVEIR NAKWVYQPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43699; Mature: 43567
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQIESLEPRTRRARVSNLRLDQSRDRLARRAVALCAALAGLLPGIALAQVKIGLVLSLT CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEEEEEC GPAASLGIPARDTVALLPRQIGGQSVEYIVLDDASDTTQAVQDTKKLISENHVDAIIGSS CCHHHCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHCCC ITPNSLAMIDVVAEGETPMISLASSAKIIEPVDAKRHWVFKTPQTDAMMASAIAEHASLH CCCCCEEEEEEEECCCCCEEEECCCCCEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHC GVKTIAFIGQADALGETFYTEVAKFAQLHHIDMVASERFNRTDPSVTGQVLKILATHPDA CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCE VVVGAAGTPAALPPKTLRERGYKGLIYHNHGVGNNDFLRVCGADCNGTFLPASPVLVAAQ EEEECCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCEEEEEE LPADHPAKRLALDYIARFEAVRGAGSVSAFGSYTWDAGMLLGHAVPVALKTAAPGTPEFR CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCCHHHH RALRDALESTRGLADTNGVVNMSATDHLGLDQRARVMVEIRNAKWVYQPR HHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCEEEECCC >Mature Secondary Structure PQIESLEPRTRRARVSNLRLDQSRDRLARRAVALCAALAGLLPGIALAQVKIGLVLSLT CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEEEEEC GPAASLGIPARDTVALLPRQIGGQSVEYIVLDDASDTTQAVQDTKKLISENHVDAIIGSS CCHHHCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHCCC ITPNSLAMIDVVAEGETPMISLASSAKIIEPVDAKRHWVFKTPQTDAMMASAIAEHASLH CCCCCEEEEEEEECCCCCEEEECCCCCEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHC GVKTIAFIGQADALGETFYTEVAKFAQLHHIDMVASERFNRTDPSVTGQVLKILATHPDA CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCE VVVGAAGTPAALPPKTLRERGYKGLIYHNHGVGNNDFLRVCGADCNGTFLPASPVLVAAQ EEEECCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCEEEEEE LPADHPAKRLALDYIARFEAVRGAGSVSAFGSYTWDAGMLLGHAVPVALKTAAPGTPEFR CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCCHHHH RALRDALESTRGLADTNGVVNMSATDHLGLDQRARVMVEIRNAKWVYQPR HHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA