| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is aceK [H]
Identifier: 91781593
GI number: 91781593
Start: 242240
End: 244078
Strand: Reverse
Name: aceK [H]
Synonym: Bxe_A4253
Alternate gene names: 91781593
Gene position: 244078-242240 (Counterclockwise)
Preceding gene: 91781594
Following gene: 91781592
Centisome position: 4.99
GC content: 58.24
Gene sequence:
>1839_bases ATGAATCACTTTCCCAAATTGCTGTCGTCGCAAATCGGCTTTGACGTCGCACAGACGATGCTCGAAGGATTCGACCGGCA TTACCGGATTTTTCGCGACGCCGCGATCCACGCCAAGACGCTCTTTGAACAGGCCGACTGGCATGGTCTGCAAAAGCTCG CGCGCGACCGCATTACCTCGTACGACGAACGCGTCGAGGAATGCGTCGAACTGCTCGAAGACGAATACGACGCGGAAAAT ATCGACGACGAAGTGTGGCAGCAGATCAAGCTGCACTATATCGGCCTTTTGACCACGCACCGCCAGCCCGAATGCGCGGA GACGTTTTTCAATTCGGTGTGCTGCAAGATCCTGCACCGCTCGTACTTCAGCAACGATTTCATTTTCGTGCGCCCGGCCA TCTCGACCGAATACATCGAGAACGACGAACCGGCCGCGAAGCCGACCTACCGTGCGTACTATCCCGGCAAGGATGGGCTC GCGGCAACGCTCGAACGCATTGTCACGAACTTCCAGTTGGAGCCGCCGTTTGAAGACCTGACACGCGACGTCGGCTGCGT GATGCAGGCAATCCAGGACGCGTTCGGCGTGTTCGACGAAGCGCCCAACTTTCAGATTCACGTGCTCTCGTCGCTGTTCT ACCGGAACAAGTCGGCGTATATCATCGGGCGGATCATCAACGGCGATCTGCTGATGCCGTTCGCGGTGCCGCTGCGGCAT GTGAAACCGGGCGTGCTCGCGCTCGACACGGTACTGCTCAAGCGCGACCAGTTGCTGATCATTTTCAGCTTTTCGCATTC GTACTTCCTCGTAGATATGGAAGTGCCGTCCGCTTATGTCGAGTTTCTCGGCACCATCATGCAGGGCAAACCGAAAGCGG AAATCTATACGTCGGTGGGTTTGCAGAAGCAGGGCAAGAATCTGTTCTATCGCGACCTGCTGCATCACCTGTCGCATTCG AGCGATCAGTTCATCATCGCGCCCGGCATCAAGGGGCTCGTGATGCTGGTGTTCACGCTGCCCTCGTTTCCGTACGTGTT CAAGCTGATCAAGGACAGCTTCCCGCCGCCGAAGGAAACCACGCGCGCGCAGATCAAGGAAAAGTATCAGCTCGTCAAAC GGCACGACCGCCTGGGCCGCATGGCCGACACACTCGAATATTCGAGCGTCGCGTTGCCGGTCTCGCGGCTCGATGAAGCG CTGGTGCGTGAACTCGAAAAGGAAGTGCCGTCGCTGATCGAATACGACGGCGACAGCCTGGTGATTCGCCATATGTATAT CGAACGCCGCATGGTGCCGCTGAATCTGTTCCTCCAGAACGGCAACGACGAGGACATCGAACACGGCATCAAGGAATACG GCAATGCAATCAAGGAACTGATGCAGGCGAACATCTTTCCGGGCGACATGCTGTACAAGAACTTCGGCGTCACGCGTCAC GGCCGCGTGGTGTTCTACGACTACGATGAAATCGAATATCTGACCGACTGCAACGTGCGCGCGGTGCCGGCGCCACGCAA CGAGGAAGACGAAATGTCCGGCGAGCCGTGGTACTCGGTCGGCCCGCACGATATTTTCCCGGAGACGTACGGCACATTTC TGCTCGGCGACCCACGCGTGCGCCGTTCCTTCATGCAGCATCACGCGGACTTCTTCGATCCTGCGCTATGGCAACGGCAC AAGGATCATCTATTGAAAGGCGAACTGGCCGATTTTTTCCCGTACGACGGCAGCGTGCGCTTCTGCATGCGCTATCCGGA GCGCTTTGCCGATGCCGCCGGAGCCGCATCAAACGAGCAGGACGCGCCGGACGCCGGGCGCAGCGTGCGGGCAGCGTGA
Upstream 100 bases:
>100_bases GCCAGGCCGGCATGAACAAGGGCGGCGCGACGCGTCGCGGGCGCACCCGGGCGATACAATCACGGGTGTCTTCACGACAT GAGACGAATGCACGGTCGAC
Downstream 100 bases:
>100_bases GACTCATACGCTGCTCGCCGTGTTGAATGCCTCGTCCTAACCTTATGTAACGACATCGACCGGTCAAGCGGTCGAGCAAC CACTCAGACGCACCATGAAC
Product: bifunctional isocitrate dehydrogenase kinase/phosphatase protein
Products: NA
Alternate protein names: IDH kinase/phosphatase; IDHK/P [H]
Number of amino acids: Translated: 612; Mature: 612
Protein sequence:
>612_residues MNHFPKLLSSQIGFDVAQTMLEGFDRHYRIFRDAAIHAKTLFEQADWHGLQKLARDRITSYDERVEECVELLEDEYDAEN IDDEVWQQIKLHYIGLLTTHRQPECAETFFNSVCCKILHRSYFSNDFIFVRPAISTEYIENDEPAAKPTYRAYYPGKDGL AATLERIVTNFQLEPPFEDLTRDVGCVMQAIQDAFGVFDEAPNFQIHVLSSLFYRNKSAYIIGRIINGDLLMPFAVPLRH VKPGVLALDTVLLKRDQLLIIFSFSHSYFLVDMEVPSAYVEFLGTIMQGKPKAEIYTSVGLQKQGKNLFYRDLLHHLSHS SDQFIIAPGIKGLVMLVFTLPSFPYVFKLIKDSFPPPKETTRAQIKEKYQLVKRHDRLGRMADTLEYSSVALPVSRLDEA LVRELEKEVPSLIEYDGDSLVIRHMYIERRMVPLNLFLQNGNDEDIEHGIKEYGNAIKELMQANIFPGDMLYKNFGVTRH GRVVFYDYDEIEYLTDCNVRAVPAPRNEEDEMSGEPWYSVGPHDIFPETYGTFLLGDPRVRRSFMQHHADFFDPALWQRH KDHLLKGELADFFPYDGSVRFCMRYPERFADAAGAASNEQDAPDAGRSVRAA
Sequences:
>Translated_612_residues MNHFPKLLSSQIGFDVAQTMLEGFDRHYRIFRDAAIHAKTLFEQADWHGLQKLARDRITSYDERVEECVELLEDEYDAEN IDDEVWQQIKLHYIGLLTTHRQPECAETFFNSVCCKILHRSYFSNDFIFVRPAISTEYIENDEPAAKPTYRAYYPGKDGL AATLERIVTNFQLEPPFEDLTRDVGCVMQAIQDAFGVFDEAPNFQIHVLSSLFYRNKSAYIIGRIINGDLLMPFAVPLRH VKPGVLALDTVLLKRDQLLIIFSFSHSYFLVDMEVPSAYVEFLGTIMQGKPKAEIYTSVGLQKQGKNLFYRDLLHHLSHS SDQFIIAPGIKGLVMLVFTLPSFPYVFKLIKDSFPPPKETTRAQIKEKYQLVKRHDRLGRMADTLEYSSVALPVSRLDEA LVRELEKEVPSLIEYDGDSLVIRHMYIERRMVPLNLFLQNGNDEDIEHGIKEYGNAIKELMQANIFPGDMLYKNFGVTRH GRVVFYDYDEIEYLTDCNVRAVPAPRNEEDEMSGEPWYSVGPHDIFPETYGTFLLGDPRVRRSFMQHHADFFDPALWQRH KDHLLKGELADFFPYDGSVRFCMRYPERFADAAGAASNEQDAPDAGRSVRAA >Mature_612_residues MNHFPKLLSSQIGFDVAQTMLEGFDRHYRIFRDAAIHAKTLFEQADWHGLQKLARDRITSYDERVEECVELLEDEYDAEN IDDEVWQQIKLHYIGLLTTHRQPECAETFFNSVCCKILHRSYFSNDFIFVRPAISTEYIENDEPAAKPTYRAYYPGKDGL AATLERIVTNFQLEPPFEDLTRDVGCVMQAIQDAFGVFDEAPNFQIHVLSSLFYRNKSAYIIGRIINGDLLMPFAVPLRH VKPGVLALDTVLLKRDQLLIIFSFSHSYFLVDMEVPSAYVEFLGTIMQGKPKAEIYTSVGLQKQGKNLFYRDLLHHLSHS SDQFIIAPGIKGLVMLVFTLPSFPYVFKLIKDSFPPPKETTRAQIKEKYQLVKRHDRLGRMADTLEYSSVALPVSRLDEA LVRELEKEVPSLIEYDGDSLVIRHMYIERRMVPLNLFLQNGNDEDIEHGIKEYGNAIKELMQANIFPGDMLYKNFGVTRH GRVVFYDYDEIEYLTDCNVRAVPAPRNEEDEMSGEPWYSVGPHDIFPETYGTFLLGDPRVRRSFMQHHADFFDPALWQRH KDHLLKGELADFFPYDGSVRFCMRYPERFADAAGAASNEQDAPDAGRSVRAA
Specific function: Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source
COG id: COG4579
COG function: function code T; Isocitrate dehydrogenase kinase/phosphatase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AceK family [H]
Homologues:
Organism=Escherichia coli, GI1790446, Length=572, Percent_Identity=41.4335664335664, Blast_Score=461, Evalue=1e-131,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010452 - ProDom: PD043552 [H]
Pfam domain/function: PF06315 AceK [H]
EC number: =2.7.11.5 [H]
Molecular weight: Translated: 70543; Mature: 70543
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHFPKLLSSQIGFDVAQTMLEGFDRHYRIFRDAAIHAKTLFEQADWHGLQKLARDRITS CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YDERVEECVELLEDEYDAENIDDEVWQQIKLHYIGLLTTHRQPECAETFFNSVCCKILHR HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH SYFSNDFIFVRPAISTEYIENDEPAAKPTYRAYYPGKDGLAATLERIVTNFQLEPPFEDL HHCCCCEEEEECCCCHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCHHHH TRDVGCVMQAIQDAFGVFDEAPNFQIHVLSSLFYRNKSAYIIGRIINGDLLMPFAVPLRH HHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCEEEEEEECCCEEHHHHHHHHH VKPGVLALDTVLLKRDQLLIIFSFSHSYFLVDMEVPSAYVEFLGTIMQGKPKAEIYTSVG CCCCHHHHHHHHHCCCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHCC LQKQGKNLFYRDLLHHLSHSSDQFIIAPGIKGLVMLVFTLPSFPYVFKLIKDSFPPPKET CHHCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHH TRAQIKEKYQLVKRHDRLGRMADTLEYSSVALPVSRLDEALVRELEKEVPSLIEYDGDSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE VIRHMYIERRMVPLNLFLQNGNDEDIEHGIKEYGNAIKELMQANIFPGDMLYKNFGVTRH EHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCC GRVVFYDYDEIEYLTDCNVRAVPAPRNEEDEMSGEPWYSVGPHDIFPETYGTFLLGDPRV CEEEEEECCCHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHH RRSFMQHHADFFDPALWQRHKDHLLKGELADFFPYDGSVRFCMRYPERFADAAGAASNEQ HHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC DAPDAGRSVRAA CCCCCCCCCCCC >Mature Secondary Structure MNHFPKLLSSQIGFDVAQTMLEGFDRHYRIFRDAAIHAKTLFEQADWHGLQKLARDRITS CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YDERVEECVELLEDEYDAENIDDEVWQQIKLHYIGLLTTHRQPECAETFFNSVCCKILHR HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH SYFSNDFIFVRPAISTEYIENDEPAAKPTYRAYYPGKDGLAATLERIVTNFQLEPPFEDL HHCCCCEEEEECCCCHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCHHHH TRDVGCVMQAIQDAFGVFDEAPNFQIHVLSSLFYRNKSAYIIGRIINGDLLMPFAVPLRH HHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCEEEEEEECCCEEHHHHHHHHH VKPGVLALDTVLLKRDQLLIIFSFSHSYFLVDMEVPSAYVEFLGTIMQGKPKAEIYTSVG CCCCHHHHHHHHHCCCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHCC LQKQGKNLFYRDLLHHLSHSSDQFIIAPGIKGLVMLVFTLPSFPYVFKLIKDSFPPPKET CHHCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHH TRAQIKEKYQLVKRHDRLGRMADTLEYSSVALPVSRLDEALVRELEKEVPSLIEYDGDSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE VIRHMYIERRMVPLNLFLQNGNDEDIEHGIKEYGNAIKELMQANIFPGDMLYKNFGVTRH EHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCC GRVVFYDYDEIEYLTDCNVRAVPAPRNEEDEMSGEPWYSVGPHDIFPETYGTFLLGDPRV CEEEEEECCCHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHH RRSFMQHHADFFDPALWQRHKDHLLKGELADFFPYDGSVRFCMRYPERFADAAGAASNEQ HHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC DAPDAGRSVRAA CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA