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The map label for this gene is rlpA [C]

Identifier: 91781531

GI number: 91781531

Start: 174046

End: 174648

Strand: Direct

Name: rlpA [C]

Synonym: Bxe_A4315

Alternate gene names: 91781531

Gene position: 174046-174648 (Clockwise)

Preceding gene: 91781530

Following gene: 91781533

Centisome position: 3.55

GC content: 65.84

Gene sequence:

>603_bases
ATGAAAACTCGGTTATCCCGTGGTCTGGGGACTCTTTTTGCCTTTTTTGCGCTGGCGGGTTGCGCCACGCCTCCGGGCGC
CGGCAACACGTCGGAGAGCGGCGTGCCGCAGAGCACAAAAAATACGCAGGCGGGCTCCTTCGGACCGCAAGCTTTCGGTA
GCGCGCCGGCCTCCGACGTGACCGCCAGGGGCTCCGCGCTGGCCGATGCAAAGCCACTTACGGATGAGGGTTCCGGCGTT
TCGGACTTTCATCAGACGGGTCGCGCTTCGTGGTACGGCCGCGGCTTTCATGGCCGCCGTACCGCCAACGGCGAACGCTA
CGATATGCACGCGCTGACCGCGGCGCATCGTACGCTGCCGCTCGGCTCCTATGTGCGCGTGACGAATCCGGCCACGTCGC
GCTCGGTGGTCGTGCGCATCAACGACCGCGGCCCGTATGCGCGCGGCCGCGTGATCGATCTGTCGATGGCCGCTGCCGCC
GTGCTCGACATGCGCCACGCGGGTACGGCGCGCGTCGAGATCGAAGGTCTGACGCAGCAGGAAGCACGTGCTGCGCGTGA
TGAAATGCTGGCATCGAACTCGGATTCGAGCGCCGAGAAGTGA

Upstream 100 bases:

>100_bases
CGCTCATCCGCGCGGCGCGTTGTCGTCCATTGCCGCCGGAGTCGCAGGCAACACGCTCAACTTTCGCGTGATGCGGCTCG
ACAATGTGATTGCACGTCTT

Downstream 100 bases:

>100_bases
TGTAGCGGCGGCGGGCGCGCTTCGCAGCGCCCGTGCAGGATGGCGGGTGTTCGCACCGCGTCCGCAAACAACAAGGGCCG
CGTCGCGCGGCCCTTGTTGT

Product: rare lipoprotein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKTRLSRGLGTLFAFFALAGCATPPGAGNTSESGVPQSTKNTQAGSFGPQAFGSAPASDVTARGSALADAKPLTDEGSGV
SDFHQTGRASWYGRGFHGRRTANGERYDMHALTAAHRTLPLGSYVRVTNPATSRSVVVRINDRGPYARGRVIDLSMAAAA
VLDMRHAGTARVEIEGLTQQEARAARDEMLASNSDSSAEK

Sequences:

>Translated_200_residues
MKTRLSRGLGTLFAFFALAGCATPPGAGNTSESGVPQSTKNTQAGSFGPQAFGSAPASDVTARGSALADAKPLTDEGSGV
SDFHQTGRASWYGRGFHGRRTANGERYDMHALTAAHRTLPLGSYVRVTNPATSRSVVVRINDRGPYARGRVIDLSMAAAA
VLDMRHAGTARVEIEGLTQQEARAARDEMLASNSDSSAEK
>Mature_200_residues
MKTRLSRGLGTLFAFFALAGCATPPGAGNTSESGVPQSTKNTQAGSFGPQAFGSAPASDVTARGSALADAKPLTDEGSGV
SDFHQTGRASWYGRGFHGRRTANGERYDMHALTAAHRTLPLGSYVRVTNPATSRSVVVRINDRGPYARGRVIDLSMAAAA
VLDMRHAGTARVEIEGLTQQEARAARDEMLASNSDSSAEK

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

Organism=Escherichia coli, GI1786852, Length=93, Percent_Identity=49.4623655913978, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR012997
- InterPro:   IPR007730 [H]

Pfam domain/function: PF03330 DPBB_1; PF05036 SPOR [H]

EC number: NA

Molecular weight: Translated: 20955; Mature: 20955

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRLSRGLGTLFAFFALAGCATPPGAGNTSESGVPQSTKNTQAGSFGPQAFGSAPASDV
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCH
TARGSALADAKPLTDEGSGVSDFHQTGRASWYGRGFHGRRTANGERYDMHALTAAHRTLP
HCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
LGSYVRVTNPATSRSVVVRINDRGPYARGRVIDLSMAAAAVLDMRHAGTARVEIEGLTQQ
CCCEEEEECCCCCCEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHCCCCEEEEEECCCHH
EARAARDEMLASNSDSSAEK
HHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKTRLSRGLGTLFAFFALAGCATPPGAGNTSESGVPQSTKNTQAGSFGPQAFGSAPASDV
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCH
TARGSALADAKPLTDEGSGVSDFHQTGRASWYGRGFHGRRTANGERYDMHALTAAHRTLP
HCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
LGSYVRVTNPATSRSVVVRINDRGPYARGRVIDLSMAAAAVLDMRHAGTARVEIEGLTQQ
CCCEEEEECCCCCCEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHCCCCEEEEEECCCHH
EARAARDEMLASNSDSSAEK
HHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]