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The map label for this gene is ynfM [H]

Identifier: 91781481

GI number: 91781481

Start: 113912

End: 115132

Strand: Reverse

Name: ynfM [H]

Synonym: Bxe_A4365

Alternate gene names: 91781481

Gene position: 115132-113912 (Counterclockwise)

Preceding gene: 91781482

Following gene: 91781480

Centisome position: 2.35

GC content: 65.93

Gene sequence:

>1221_bases
TTGCAACCCGCTTCCCCCGTGCCCGACATCCCCTATCTCGAACGCGGCACACGCGCGTACTGGCGCGCCAGCATCGCGCT
GCTGTTCGCCGGCTACGCCACGTTCTCGCTCCTTTATTGTGTGCAGCCGCTGCTGCCGTCGTTTTCCGCGGCGTTCAACG
TAACGCCGGCACAAAGCAGCCTGTCGCTCTCATTGACCACGGCTGCGCTCGCGCTTGCCGTGTTCGTCGCCGGCTTCATC
TCCGAAGGCTGGAGCCGTCACAAGCTGATGACGCTGTCGCTCACCATTTCGGCACTGGCGACCATCGGCGTGTCGATCGC
GCCGCATTGGCATCAACTGCTCGTGCTGCGCACGCTCGAAGGTCTCGCGCTCGGTGGCGTGCCCGCCGTCGCAATGGCCT
ATCTCGCGGAAGAAGTGCACCCCGACGGCCTCGGCCTCGCGATGGGCCTCTATGTCGGCGGCACGGCGATCGGAGGGATG
GCCGGGCGCGTGATTACCGGCGTCGTCGCGGATCTTTTTTCGTGGCGCGTCGCGATCGGGACGATTGGCGTGCTCGGGCT
ACTGTCCATGCTCGCGTTTCGCGCGCTGCTGCCGCCGTCGCGTCATTTCGTGCCGCGGCGCGGACTCGGCTTCACGCATC
ACCGTACCGCGCTGCTCAGGCAGTTCACGCGGCCCGGCCTGCCTCTGCTGTTCCTGCTCGGCTTCGTGCTGATGGGCAGC
TTCGTCACGCTGTACAACTACATCGGCTACCGGTTGCTGGCGCCGCCGTACCGATTGGATCAGACGGAAATCGGCGCGAT
CTTCGTCGTGTATCTGACGGGCGTGGTGGCCTCGCCGTGGTCGGGACGCATGGCCGACACCTTCGGCCGCGCACGCGTGC
TCACCGCCAGCCTGCTATTGATGGCGTTCGGTCTCGCGCTCACCATGCTGCATCCGCTAACGGCGATCGCGGCCGGCATT
GCGTGCGTGACGTTCGGTTTCTTCGCCGGGCACTCGGTGGCAAGCGGCTGGGTCGGACGTCTCGCCAAAGATGCCAAAGG
TCAGGCTGCGGCGCTCTATCTGCTCGCGTATTACATCGGCTCGAGCGTGGTGGGCTCGTATGGCGGCCACATGTGGACGA
GTTACGGATGGAACGGCGTCGCCGGACTGGTCGGCGCATTGCTCGTCATCGGCCTGATAGCGGCGGCGCGTCTGCGCAAA
CGGGAGCAGCCTCTCGCGTGA

Upstream 100 bases:

>100_bases
TCATGGCTGCGTCGTGGTCCCGCCGCGGCCGCGGCCCGCAGCGCGCTCCAGCGACCCGTGCCGCCCTTTTTCAGCGTATC
CTTAACTCCCTTTTTGTCCT

Downstream 100 bases:

>100_bases
TCGCTCTATGACCCAACCCGCATTGAATGACGCCTGAAAGTAAGCCCGGCGTAAGCAAACGCTTCATCTTTTTCGATGTA
TTTGCTGCGTCGCGGTAATC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MQPASPVPDIPYLERGTRAYWRASIALLFAGYATFSLLYCVQPLLPSFSAAFNVTPAQSSLSLSLTTAALALAVFVAGFI
SEGWSRHKLMTLSLTISALATIGVSIAPHWHQLLVLRTLEGLALGGVPAVAMAYLAEEVHPDGLGLAMGLYVGGTAIGGM
AGRVITGVVADLFSWRVAIGTIGVLGLLSMLAFRALLPPSRHFVPRRGLGFTHHRTALLRQFTRPGLPLLFLLGFVLMGS
FVTLYNYIGYRLLAPPYRLDQTEIGAIFVVYLTGVVASPWSGRMADTFGRARVLTASLLLMAFGLALTMLHPLTAIAAGI
ACVTFGFFAGHSVASGWVGRLAKDAKGQAAALYLLAYYIGSSVVGSYGGHMWTSYGWNGVAGLVGALLVIGLIAAARLRK
REQPLA

Sequences:

>Translated_406_residues
MQPASPVPDIPYLERGTRAYWRASIALLFAGYATFSLLYCVQPLLPSFSAAFNVTPAQSSLSLSLTTAALALAVFVAGFI
SEGWSRHKLMTLSLTISALATIGVSIAPHWHQLLVLRTLEGLALGGVPAVAMAYLAEEVHPDGLGLAMGLYVGGTAIGGM
AGRVITGVVADLFSWRVAIGTIGVLGLLSMLAFRALLPPSRHFVPRRGLGFTHHRTALLRQFTRPGLPLLFLLGFVLMGS
FVTLYNYIGYRLLAPPYRLDQTEIGAIFVVYLTGVVASPWSGRMADTFGRARVLTASLLLMAFGLALTMLHPLTAIAAGI
ACVTFGFFAGHSVASGWVGRLAKDAKGQAAALYLLAYYIGSSVVGSYGGHMWTSYGWNGVAGLVGALLVIGLIAAARLRK
REQPLA
>Mature_406_residues
MQPASPVPDIPYLERGTRAYWRASIALLFAGYATFSLLYCVQPLLPSFSAAFNVTPAQSSLSLSLTTAALALAVFVAGFI
SEGWSRHKLMTLSLTISALATIGVSIAPHWHQLLVLRTLEGLALGGVPAVAMAYLAEEVHPDGLGLAMGLYVGGTAIGGM
AGRVITGVVADLFSWRVAIGTIGVLGLLSMLAFRALLPPSRHFVPRRGLGFTHHRTALLRQFTRPGLPLLFLLGFVLMGS
FVTLYNYIGYRLLAPPYRLDQTEIGAIFVVYLTGVVASPWSGRMADTFGRARVLTASLLLMAFGLALTMLHPLTAIAAGI
ACVTFGFFAGHSVASGWVGRLAKDAKGQAAALYLLAYYIGSSVVGSYGGHMWTSYGWNGVAGLVGALLVIGLIAAARLRK
REQPLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=393, Percent_Identity=46.8193384223919, Blast_Score=350, Evalue=1e-97,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43039; Mature: 43039

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPASPVPDIPYLERGTRAYWRASIALLFAGYATFSLLYCVQPLLPSFSAAFNVTPAQSS
CCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LSLSLTTAALALAVFVAGFISEGWSRHKLMTLSLTISALATIGVSIAPHWHQLLVLRTLE
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
GLALGGVPAVAMAYLAEEVHPDGLGLAMGLYVGGTAIGGMAGRVITGVVADLFSWRVAIG
HHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TIGVLGLLSMLAFRALLPPSRHFVPRRGLGFTHHRTALLRQFTRPGLPLLFLLGFVLMGS
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
FVTLYNYIGYRLLAPPYRLDQTEIGAIFVVYLTGVVASPWSGRMADTFGRARVLTASLLL
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
MAFGLALTMLHPLTAIAAGIACVTFGFFAGHSVASGWVGRLAKDAKGQAAALYLLAYYIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SSVVGSYGGHMWTSYGWNGVAGLVGALLVIGLIAAARLRKREQPLA
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQPASPVPDIPYLERGTRAYWRASIALLFAGYATFSLLYCVQPLLPSFSAAFNVTPAQSS
CCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LSLSLTTAALALAVFVAGFISEGWSRHKLMTLSLTISALATIGVSIAPHWHQLLVLRTLE
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
GLALGGVPAVAMAYLAEEVHPDGLGLAMGLYVGGTAIGGMAGRVITGVVADLFSWRVAIG
HHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TIGVLGLLSMLAFRALLPPSRHFVPRRGLGFTHHRTALLRQFTRPGLPLLFLLGFVLMGS
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
FVTLYNYIGYRLLAPPYRLDQTEIGAIFVVYLTGVVASPWSGRMADTFGRARVLTASLLL
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
MAFGLALTMLHPLTAIAAGIACVTFGFFAGHSVASGWVGRLAKDAKGQAAALYLLAYYIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SSVVGSYGGHMWTSYGWNGVAGLVGALLVIGLIAAARLRKREQPLA
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]