| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is htpX [H]
Identifier: 91781433
GI number: 91781433
Start: 64646
End: 65536
Strand: Direct
Name: htpX [H]
Synonym: Bxe_A4413
Alternate gene names: 91781433
Gene position: 64646-65536 (Clockwise)
Preceding gene: 91781432
Following gene: 91781434
Centisome position: 1.32
GC content: 63.19
Gene sequence:
>891_bases ATGAACCCCGCGTTAGGGCAAGGAGTTGCAGACATGTTCAATTGGGTCAAAACCGCGATGTTGATGGCCGCGATCACGGC CCTTTTCATCGTGATCGGCGGGATGATCGGCGGGTCGCGCGGCATGACGATCGCGCTCGTGATCGCCCTTGGAATGAATT TCTTTTCGTACTGGTTCTCGGACAAGATGGTGCTGCGCATGTACAACGCGCAGGAGGTCGACGAAACCAGCGCGCCGCAG TTCTATCGCATGGTGCGCGAGCTTTCCACGCGCGCCGGCCTGCCCATGCCGCGCGTGTACCTGATCAATGAAGATGCGCC GAACGCGTTCGCCACCGGCCGCAATCCGGAGCATGCGGCGGTCGCCGCCACCACCGGCATTCTGCGTGTGCTGTCCGAGC GCGAAATGCGCGGCGTGATGGCGCATGAACTCGCGCACGTGAAGCATCGCGACATTCTGATTTCAACCGTCTCGGCCACG ATGGCCGGCGCCATTTCCGCGCTGGCGAACTTCGCGATGTTCTTCGGCGGGCGCGACGAAAACGGTCGGCCCACGAACCC GATCGCGAGCATTGCGGTCGCGCTGCTGGCGCCGATCGCCGGTGCGCTGATTCAGATGGCGATTTCGCGGGCACGTGAAT TCGAAGCCGACCGCGGCGGCGCACAGATTTCCGGCGACCCGCAGGCGCTCGCTTCGGCGCTCGACAAGATCCACCGTTAC GCGAGCGGGATTCCGTTTCCCACCGCCGAGCAGCATCCGGCCACCGCGCAAATGATGATCATGAATCCGTTGGCGGGCGG CGGCATCGCGAATCTGTTCTCCACGCACCCGGCTACCGAGGAACGCATCGCACGTTTGATGGAAATGGCGCGCACGGGGC GCTTCGAATAA
Upstream 100 bases:
>100_bases GCATCAAGCTAGCCACCGCGTCGAGATGATTGAATTTTCCTCGCGCGCCCATATCTAACGTTTCGCTTACAATCAGGCGC CGCGATCACGCGGTGCAGAT
Downstream 100 bases:
>100_bases CGCCGCGACAACACCGCGCGCGGCGTTCAGGAAGGCGAGTCCGAGGGCTCGCCTTTTTATGCGGAACGCAAAGGGAAAAC GAACGAGCGGCGGCGCTGCT
Product: M48 family peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MNPALGQGVADMFNWVKTAMLMAAITALFIVIGGMIGGSRGMTIALVIALGMNFFSYWFSDKMVLRMYNAQEVDETSAPQ FYRMVRELSTRAGLPMPRVYLINEDAPNAFATGRNPEHAAVAATTGILRVLSEREMRGVMAHELAHVKHRDILISTVSAT MAGAISALANFAMFFGGRDENGRPTNPIASIAVALLAPIAGALIQMAISRAREFEADRGGAQISGDPQALASALDKIHRY ASGIPFPTAEQHPATAQMMIMNPLAGGGIANLFSTHPATEERIARLMEMARTGRFE
Sequences:
>Translated_296_residues MNPALGQGVADMFNWVKTAMLMAAITALFIVIGGMIGGSRGMTIALVIALGMNFFSYWFSDKMVLRMYNAQEVDETSAPQ FYRMVRELSTRAGLPMPRVYLINEDAPNAFATGRNPEHAAVAATTGILRVLSEREMRGVMAHELAHVKHRDILISTVSAT MAGAISALANFAMFFGGRDENGRPTNPIASIAVALLAPIAGALIQMAISRAREFEADRGGAQISGDPQALASALDKIHRY ASGIPFPTAEQHPATAQMMIMNPLAGGGIANLFSTHPATEERIARLMEMARTGRFE >Mature_296_residues MNPALGQGVADMFNWVKTAMLMAAITALFIVIGGMIGGSRGMTIALVIALGMNFFSYWFSDKMVLRMYNAQEVDETSAPQ FYRMVRELSTRAGLPMPRVYLINEDAPNAFATGRNPEHAAVAATTGILRVLSEREMRGVMAHELAHVKHRDILISTVSAT MAGAISALANFAMFFGGRDENGRPTNPIASIAVALLAPIAGALIQMAISRAREFEADRGGAQISGDPQALASALDKIHRY ASGIPFPTAEQHPATAQMMIMNPLAGGGIANLFSTHPATEERIARLMEMARTGRFE
Specific function: Unknown Function. Overexpression Of A Truncated Form Of The Htpx Protein Leads To An Increase In The Degradation Of Abnormal Proteins. [C]
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M48B family [H]
Homologues:
Organism=Escherichia coli, GI1788133, Length=269, Percent_Identity=31.9702602230483, Blast_Score=100, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022919 - InterPro: IPR001915 [H]
Pfam domain/function: PF01435 Peptidase_M48 [H]
EC number: 3.4.24.- [C]
Molecular weight: Translated: 31856; Mature: 31856
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.1 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPALGQGVADMFNWVKTAMLMAAITALFIVIGGMIGGSRGMTIALVIALGMNFFSYWFS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC DKMVLRMYNAQEVDETSAPQFYRMVRELSTRAGLPMPRVYLINEDAPNAFATGRNPEHAA CHHHHHHHCHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHH VAATTGILRVLSEREMRGVMAHELAHVKHRDILISTVSATMAGAISALANFAMFFGGRDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NGRPTNPIASIAVALLAPIAGALIQMAISRAREFEADRGGAQISGDPQALASALDKIHRY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH ASGIPFPTAEQHPATAQMMIMNPLAGGGIANLFSTHPATEERIARLMEMARTGRFE HCCCCCCCCCCCCCHHHHHEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNPALGQGVADMFNWVKTAMLMAAITALFIVIGGMIGGSRGMTIALVIALGMNFFSYWFS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC DKMVLRMYNAQEVDETSAPQFYRMVRELSTRAGLPMPRVYLINEDAPNAFATGRNPEHAA CHHHHHHHCHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHH VAATTGILRVLSEREMRGVMAHELAHVKHRDILISTVSATMAGAISALANFAMFFGGRDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NGRPTNPIASIAVALLAPIAGALIQMAISRAREFEADRGGAQISGDPQALASALDKIHRY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH ASGIPFPTAEQHPATAQMMIMNPLAGGGIANLFSTHPATEERIARLMEMARTGRFE HCCCCCCCCCCCCCHHHHHEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA