| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91781391
Identifier: 91781391
GI number: 91781391
Start: 9386
End: 11887
Strand: Direct
Name: 91781391
Synonym: Bxe_A4456
Alternate gene names: NA
Gene position: 9386-11887 (Clockwise)
Preceding gene: 91781387
Following gene: 91781392
Centisome position: 0.19
GC content: 57.47
Gene sequence:
>2502_bases GTGACAATCATCCAAGAAATCTGCCAGTGGTCGAAGACTCTTTCGGCATGGCAGCAAGATGCTATTGCACGACTGTACGT TAATCGCGAACTGTCGCCCGAGGACATCGAGGACATCGAGGACATCTATGCACTAGCCAAGGCTGAAGCGGGTATCCCTG ACGAGGATGGCCGAGTGCCCAAGAAGTTGGAAGGTACCGAGGTCGCCCCTCAAACCAACCCTACTCGACTGGTTCAGATT GTCGCCGTCAAGGAGTTGCAGCATGTTAACGCATTGGTTCAGGGTGGTCGGCTCCCAATTTCGCCGACCGGCCTGACCGT TATCTACGGTGAAAATGGAGCAGGGAAATCTGGCTATTCCAGAATATTCAAGCATGCGTGCCGCGCGCGGGACCGCAGAG AACCTATCCTTCCCAACGCTCGTCTGGACCCGAAGGATGTCGGGACCGCACAGGCGGTATTTGAGACCATTGTCGATGGC ACGACGGTCGACTTCGTGTGGAAGCATCGCTCAGAACCGCCCGTACCGTTGGCCGACATCTCAATCTTCGATACCCACTG CGCACGTGCGTATATCGACAACCAGGGTGATTTCGCCTACGTGCCATACGGGCTCGATATTCTCGAAGGGCTGGTGAGTC TCAGTACGAAGCTGAAGGCGCGCGCGACGAAAGAGAAGGCAGACTCGTCGCCGAGCGATGCGGCGTACTCTTCGTTAATC AACCAGACCACTGCCGTCGGTCGCGCACTCAGCGGCATTTCCAAGAAGACCACCAGAGAACAGATAGAGCAGTTGGCGGA GCTGTCAGACGATGAAGTCGAACGCCGAGAAGTCTTGACGAAGACGCTTTCCGAAGCGGACCCGAAGACGAAAGCCCGAG AGATTCGAAACAAGGAGCTTCGCATAAAGGGACTGAAGACGCAGATTGAGGCAAAGCTCGGGACCGTCTCGGTTGAAAAG CTGCGAAATCTTCAGGAACTTATCGGCAAATCGAACGCCGCGAAGAAAACCGCTGACACCGCCGCGGAAGCGTTTCGAAG TGAGCCGGGGCAGCTTCCTGGCACTGGTGGCGAGGAGTGGAAGACGCTGTTCGAGGCGGCTCGTGACTTCGCAGCCATCT CCCACGCTGGCCACCAGATTTCTGCTCTTCCGGAAGATGCGAAGTGCCCTCTCTGCCAGAACGAGCTGGGCGCAGAAGGC GCAGGCAGGCTTGGTCGCTTCGACGCGTTTATCAAGGACAGGGTTGAGCAAGCCGCGAAGGACGCGCGGAACTTGGCGAA GGACGCATACAACGCGATAAAGAGTGCGAAACTCGACTTCCCCATTGATGCGGCCTTGAAGGAAGAGCTGAACGCGCTGG ACGCACAGCTGTTGCCGTTCTGCGAGCAATTGGAAGCCAGCTTGAAGACCCGGCAATCTGACGCGTTGCTTGCTTCCGGG GGCACTCTGCCGTGGGAAAGCGTGTGCGCCGTGCAGAACGATGCTGCCGTCCGACTCGGAGAGGTTGCCGATGCATTGGA AGCTCAGGCAAAGACCCTCGAAGCATCGGCCGACGAAGTCGCTCGCGCAAAGCTGCTACTCGAACGAGCGGAGCTTGACG CAAGGCACAAGCTTCGCGAGGTGAAGGATGCCGTGCTCGAGGCAATTTCGAAATATGAGTATTGCGCGAAGTTGCAAAAG TGCATCGACGGCACCGACACGCGTGGGATTTCTCGAAAGTCCACCGACCTGTCCCGAACCCTTGCAAGTAAGGAGTTGGC GGATGCGCTGAACGACGAGCTCAAGAGGTTGAAGTGTCATGAGTTGCAGGTCGTCATGAAGCCAGAATCGCCCGGTGGCC GAACGCAGTTTAAGCTCACGCTTCAACTGCCGGGCAACGCGACGCCGGCTGCAATTCTCAGTGAAGGCGAACAGCGCGCC ATCGCTATCGCGTCGTTCCTCGCGGAAACCAAGCTCGGCGGCGGTCTCGGCGGCATCGTCTTCGACGACCCGGTCTCGTC ACTCGACCATCGCCGACGTTGGGAAGTCGCGGAGCGCCTCGTTGAAGAGTCGCTCAAGCGGCAGGTCATCGTGTTTACGC ACGACATCTATTTCCTGTGCATTCTTGAACAGAAGGCTGAGGAGCTCAAAGCCCAGTTCCAAGCAAACTACATTCGCCGC ACTGGCGATGGATTCGGTGCGCATTCCGATGGCCTTCCCTTCGATGTGCTCGGGACGAAGAACCGCGTTGGCAAGCTGAG GCAGATGCTTGTTGAGGTTCGCAAGGCACATGCTGACGGAGACGAGGACGCGCATCGGACCCTCACATCGCGTGCGTATG GTGATTTACGCCTCGCGTGGGAGCGGTGCGTGGAAGAGGTCCTCTTCAACGGTGCGATTCAACGCTTTGGCGAAGGTGTT TCAACACTAAGGCTGAAAGAGGTCACTGTCTCGGACGATGACTATCGCGCAATAGAAGCAGCGATTGTTGATGGGCGCAT AAAACTGACCCACTTCCGCTAG
Upstream 100 bases:
>100_bases CTTAATTTCGCAACAGCGTCTAAATCTCTGCGCCCATTTCAAACAAAGCCTCGACCAAAGTAACTGCTTCGGTCGCGATA AATTCCGAGGGGTCTGACGA
Downstream 100 bases:
>100_bases AAATTTGCATCGAAAATTGACCCACATGTTCAACTTCCTGCTTGGACGCCAAGCAGGAGAACGGAGTGATAACCGTGAGC ATGTTGGCCAAGATTCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 833; Mature: 832
Protein sequence:
>833_residues MTIIQEICQWSKTLSAWQQDAIARLYVNRELSPEDIEDIEDIYALAKAEAGIPDEDGRVPKKLEGTEVAPQTNPTRLVQI VAVKELQHVNALVQGGRLPISPTGLTVIYGENGAGKSGYSRIFKHACRARDRREPILPNARLDPKDVGTAQAVFETIVDG TTVDFVWKHRSEPPVPLADISIFDTHCARAYIDNQGDFAYVPYGLDILEGLVSLSTKLKARATKEKADSSPSDAAYSSLI NQTTAVGRALSGISKKTTREQIEQLAELSDDEVERREVLTKTLSEADPKTKAREIRNKELRIKGLKTQIEAKLGTVSVEK LRNLQELIGKSNAAKKTADTAAEAFRSEPGQLPGTGGEEWKTLFEAARDFAAISHAGHQISALPEDAKCPLCQNELGAEG AGRLGRFDAFIKDRVEQAAKDARNLAKDAYNAIKSAKLDFPIDAALKEELNALDAQLLPFCEQLEASLKTRQSDALLASG GTLPWESVCAVQNDAAVRLGEVADALEAQAKTLEASADEVARAKLLLERAELDARHKLREVKDAVLEAISKYEYCAKLQK CIDGTDTRGISRKSTDLSRTLASKELADALNDELKRLKCHELQVVMKPESPGGRTQFKLTLQLPGNATPAAILSEGEQRA IAIASFLAETKLGGGLGGIVFDDPVSSLDHRRRWEVAERLVEESLKRQVIVFTHDIYFLCILEQKAEELKAQFQANYIRR TGDGFGAHSDGLPFDVLGTKNRVGKLRQMLVEVRKAHADGDEDAHRTLTSRAYGDLRLAWERCVEEVLFNGAIQRFGEGV STLRLKEVTVSDDDYRAIEAAIVDGRIKLTHFR
Sequences:
>Translated_833_residues MTIIQEICQWSKTLSAWQQDAIARLYVNRELSPEDIEDIEDIYALAKAEAGIPDEDGRVPKKLEGTEVAPQTNPTRLVQI VAVKELQHVNALVQGGRLPISPTGLTVIYGENGAGKSGYSRIFKHACRARDRREPILPNARLDPKDVGTAQAVFETIVDG TTVDFVWKHRSEPPVPLADISIFDTHCARAYIDNQGDFAYVPYGLDILEGLVSLSTKLKARATKEKADSSPSDAAYSSLI NQTTAVGRALSGISKKTTREQIEQLAELSDDEVERREVLTKTLSEADPKTKAREIRNKELRIKGLKTQIEAKLGTVSVEK LRNLQELIGKSNAAKKTADTAAEAFRSEPGQLPGTGGEEWKTLFEAARDFAAISHAGHQISALPEDAKCPLCQNELGAEG AGRLGRFDAFIKDRVEQAAKDARNLAKDAYNAIKSAKLDFPIDAALKEELNALDAQLLPFCEQLEASLKTRQSDALLASG GTLPWESVCAVQNDAAVRLGEVADALEAQAKTLEASADEVARAKLLLERAELDARHKLREVKDAVLEAISKYEYCAKLQK CIDGTDTRGISRKSTDLSRTLASKELADALNDELKRLKCHELQVVMKPESPGGRTQFKLTLQLPGNATPAAILSEGEQRA IAIASFLAETKLGGGLGGIVFDDPVSSLDHRRRWEVAERLVEESLKRQVIVFTHDIYFLCILEQKAEELKAQFQANYIRR TGDGFGAHSDGLPFDVLGTKNRVGKLRQMLVEVRKAHADGDEDAHRTLTSRAYGDLRLAWERCVEEVLFNGAIQRFGEGV STLRLKEVTVSDDDYRAIEAAIVDGRIKLTHFR >Mature_832_residues TIIQEICQWSKTLSAWQQDAIARLYVNRELSPEDIEDIEDIYALAKAEAGIPDEDGRVPKKLEGTEVAPQTNPTRLVQIV AVKELQHVNALVQGGRLPISPTGLTVIYGENGAGKSGYSRIFKHACRARDRREPILPNARLDPKDVGTAQAVFETIVDGT TVDFVWKHRSEPPVPLADISIFDTHCARAYIDNQGDFAYVPYGLDILEGLVSLSTKLKARATKEKADSSPSDAAYSSLIN QTTAVGRALSGISKKTTREQIEQLAELSDDEVERREVLTKTLSEADPKTKAREIRNKELRIKGLKTQIEAKLGTVSVEKL RNLQELIGKSNAAKKTADTAAEAFRSEPGQLPGTGGEEWKTLFEAARDFAAISHAGHQISALPEDAKCPLCQNELGAEGA GRLGRFDAFIKDRVEQAAKDARNLAKDAYNAIKSAKLDFPIDAALKEELNALDAQLLPFCEQLEASLKTRQSDALLASGG TLPWESVCAVQNDAAVRLGEVADALEAQAKTLEASADEVARAKLLLERAELDARHKLREVKDAVLEAISKYEYCAKLQKC IDGTDTRGISRKSTDLSRTLASKELADALNDELKRLKCHELQVVMKPESPGGRTQFKLTLQLPGNATPAAILSEGEQRAI AIASFLAETKLGGGLGGIVFDDPVSSLDHRRRWEVAERLVEESLKRQVIVFTHDIYFLCILEQKAEELKAQFQANYIRRT GDGFGAHSDGLPFDVLGTKNRVGKLRQMLVEVRKAHADGDEDAHRTLTSRAYGDLRLAWERCVEEVLFNGAIQRFGEGVS TLRLKEVTVSDDDYRAIEAAIVDGRIKLTHFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91604; Mature: 91472
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIIQEICQWSKTLSAWQQDAIARLYVNRELSPEDIEDIEDIYALAKAEAGIPDEDGRVP CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC KKLEGTEVAPQTNPTRLVQIVAVKELQHVNALVQGGRLPISPTGLTVIYGENGAGKSGYS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHH RIFKHACRARDRREPILPNARLDPKDVGTAQAVFETIVDGTTVDFVWKHRSEPPVPLADI HHHHHHHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCEEEEHEECCCCCCCCEECH SIFDTHCARAYIDNQGDFAYVPYGLDILEGLVSLSTKLKARATKEKADSSPSDAAYSSLI HHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH NQTTAVGRALSGISKKTTREQIEQLAELSDDEVERREVLTKTLSEADPKTKAREIRNKEL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCE RIKGLKTQIEAKLGTVSVEKLRNLQELIGKSNAAKKTADTAAEAFRSEPGQLPGTGGEEW EEEHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH KTLFEAARDFAAISHAGHQISALPEDAKCPLCQNELGAEGAGRLGRFDAFIKDRVEQAAK HHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHH DARNLAKDAYNAIKSAKLDFPIDAALKEELNALDAQLLPFCEQLEASLKTRQSDALLASG HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC GTLPWESVCAVQNDAAVRLGEVADALEAQAKTLEASADEVARAKLLLERAELDARHKLRE CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH VKDAVLEAISKYEYCAKLQKCIDGTDTRGISRKSTDLSRTLASKELADALNDELKRLKCH HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ELQVVMKPESPGGRTQFKLTLQLPGNATPAAILSEGEQRAIAIASFLAETKLGGGLGGIV HEEEEECCCCCCCCEEEEEEEECCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCE FDDPVSSLDHRRRWEVAERLVEESLKRQVIVFTHDIYFLCILEQKAEELKAQFQANYIRR ECCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECEEEEEEHHHHHHHHHHHHHHHHHHH TGDGFGAHSDGLPFDVLGTKNRVGKLRQMLVEVRKAHADGDEDAHRTLTSRAYGDLRLAW CCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH ERCVEEVLFNGAIQRFGEGVSTLRLKEVTVSDDDYRAIEAAIVDGRIKLTHFR HHHHHHHHHHHHHHHHCCCHHHEEEEEEEECCCCHHHHHHHEECCEEEEEECC >Mature Secondary Structure TIIQEICQWSKTLSAWQQDAIARLYVNRELSPEDIEDIEDIYALAKAEAGIPDEDGRVP CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC KKLEGTEVAPQTNPTRLVQIVAVKELQHVNALVQGGRLPISPTGLTVIYGENGAGKSGYS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHH RIFKHACRARDRREPILPNARLDPKDVGTAQAVFETIVDGTTVDFVWKHRSEPPVPLADI HHHHHHHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCEEEEHEECCCCCCCCEECH SIFDTHCARAYIDNQGDFAYVPYGLDILEGLVSLSTKLKARATKEKADSSPSDAAYSSLI HHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH NQTTAVGRALSGISKKTTREQIEQLAELSDDEVERREVLTKTLSEADPKTKAREIRNKEL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCE RIKGLKTQIEAKLGTVSVEKLRNLQELIGKSNAAKKTADTAAEAFRSEPGQLPGTGGEEW EEEHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH KTLFEAARDFAAISHAGHQISALPEDAKCPLCQNELGAEGAGRLGRFDAFIKDRVEQAAK HHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHH DARNLAKDAYNAIKSAKLDFPIDAALKEELNALDAQLLPFCEQLEASLKTRQSDALLASG HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC GTLPWESVCAVQNDAAVRLGEVADALEAQAKTLEASADEVARAKLLLERAELDARHKLRE CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH VKDAVLEAISKYEYCAKLQKCIDGTDTRGISRKSTDLSRTLASKELADALNDELKRLKCH HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ELQVVMKPESPGGRTQFKLTLQLPGNATPAAILSEGEQRAIAIASFLAETKLGGGLGGIV HEEEEECCCCCCCCEEEEEEEECCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCE FDDPVSSLDHRRRWEVAERLVEESLKRQVIVFTHDIYFLCILEQKAEELKAQFQANYIRR ECCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECEEEEEEHHHHHHHHHHHHHHHHHHH TGDGFGAHSDGLPFDVLGTKNRVGKLRQMLVEVRKAHADGDEDAHRTLTSRAYGDLRLAW CCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH ERCVEEVLFNGAIQRFGEGVSTLRLKEVTVSDDDYRAIEAAIVDGRIKLTHFR HHHHHHHHHHHHHHHHCCCHHHEEEEEEEECCCCHHHHHHHEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA