| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781388
Identifier: 91781388
GI number: 91781388
Start: 5932
End: 7425
Strand: Reverse
Name: 91781388
Synonym: Bxe_A4459
Alternate gene names: NA
Gene position: 7425-5932 (Counterclockwise)
Preceding gene: 91781389
Following gene: NA
Centisome position: 0.15
GC content: 64.52
Gene sequence:
>1494_bases ATGCAGCACGAACTCGAGATGGTCACGCTCGAGGAACTCGTGCCGAAGGACCACCTGCTGCGCAAGATCGACGCGGCGGT GGATTTCGAGTTCATCCGCGAGAAGGTGGCGCACCTGTACTGCGCGGACAACGGGCGGCCCGCGCTGGACCCGGTGGTGA TGTTCAAACTGCTGTTCGTCGGCTACCTGTTCGGGGTGCGCAGCGAGCGCCAACTCATGCGCGAGGTGCAGGTCAATGTC GCTTACCGGTGGTTCGCGCGCTTGCGGCTGACTGACCGGGTGCCCGATGCCTCGACGTTCTCGCAGAACCGGCGCCGGCG TTTCACCGACACGACGGTCTACCAGGAGATCTTCGACGCGATCGTGCAGCAGGCGATCGGGCGCGGCATGGTCGAGGGGC GCGTGCTCTACACCGATAGCACGCACCTGAAGGCCAATGCGAACAAACGCAAGTTCGATCTGGTACAGCTTGAGCAGACG CCCTCGGCCTATCTGGCCGCGCTGGATGCCGCGGTCGATGCCGATCGTGCCGCGCACGATAAAAAGCCGCTCAGGCGCGA CGGGCCGCAGGCCAACGACAAGGGAAAGAACGACGACGACACGCCGGGTTCGTCGGGGACAGGCGAAGGCAAGGAAACGA AGGTCAGCCGCACCGACCCTGAGAGCGGCTACATGGTGCGCGACGACAAGCCCACGGGCTTCTTCTATCTGGATCACCGC ACGGTCGACGCGCGCTACCCGATCATCACCGACACCCACGTGACGCCGGCCTCGGTGCACGACAGCCAGCCTTATCTGGC GCGTCTGGACCGGCAGCGCAGGCGCTTCGGTTTCCATGTGCAGGCCGTGGGGCTGGACGCGGGCTACTTCACGCCGGCAA TCTGTCAGGGGCTGGAGGATCGTGGCATCGACGGTGTGATGGGCTATCGCACACCGAATCACAAGCCCGGGTTCTTCTAC AAACGCGACTTCAGATACAGCCGGTATCGCGAGGAATACACCTGTCCGCGGGGACAGGTGCTGCGCTACAGCACGACGAA CCGCGCAGGCTATCAGGAGTTCCGGTCCGACCCTGCACAGTGCGGTAGCTGCGAGGTGCGCAACAAATGCACGACGAGCG CCAACCACGTGAAGGTGGTGATCCGGCACGTCTGGGAGCGCGCAAAGGAACATGTGGATGCCAGGCGTCTGACCGACTGG GGCAAGGCGATCTACAAACGGCGCAAGGAGACGGTGGAGCGCAGCTTCGCGGATGCCAAACAGTTGCACGGGCATCGCTA TGCGCGCATGCGTGGCCTGCGCAAGGTGGCCGAGCAGTGCCTGCTGGGCGCGGCCGCGCAGAACATCAAGAAGATCGCCC TGCTGGTGGCACGCCTGAAGGCGTGTTTGCGCGTACCTGGCTCCCGTCCTGGCGTCCTGCACAGGCTCGCCAGCGCGTTT CTGGCCCGCTTCGTCCGATCTGGGGAGACCCATCGCACGATCTGCCTGGCCTGA
Upstream 100 bases:
>100_bases TTATGAGGTGGCCGCAGACTGCTGACAAAGTACTCCCAAAGCCTGGCCAAGCGCCGGGCTTTGTCGTTTAATGAGCCTCA TGCTCAGGAAACCGACACCC
Downstream 100 bases:
>100_bases AAAACAAAACCCCACGCTCCGAAAAACGTGGGGTTGGTCAGCAGTCTGCGGCCACCTTTATGAGGTGGCCGTTTTTCTTT CAGAATAACGCTCGACAGGC
Product: putative transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISBma2 Transposase; Transposase IS4 Family; Transposase Is4 Family Protein; IS4 Family Transposase; ISPsy22 Transposase Truncated; IS5 Family Transposase N-Terminal Domain Protein; Transposase And Inactivated Derivative; ISMca1 Transposase; IS5 Family Transposase N-Terminal Domain; Transposase ; Transposase Fragment IS5 Family; IS4 Transposase; Transposase For IS; Transposase-Related Protein; Transposase Mutator Type; Phage-Associated Cell Wall Hydrolase; Transposase Truncated; Transposase For Insertion Sequence NGRIS-8b; ISSag8 Transposase
Number of amino acids: Translated: 497; Mature: 497
Protein sequence:
>497_residues MQHELEMVTLEELVPKDHLLRKIDAAVDFEFIREKVAHLYCADNGRPALDPVVMFKLLFVGYLFGVRSERQLMREVQVNV AYRWFARLRLTDRVPDASTFSQNRRRRFTDTTVYQEIFDAIVQQAIGRGMVEGRVLYTDSTHLKANANKRKFDLVQLEQT PSAYLAALDAAVDADRAAHDKKPLRRDGPQANDKGKNDDDTPGSSGTGEGKETKVSRTDPESGYMVRDDKPTGFFYLDHR TVDARYPIITDTHVTPASVHDSQPYLARLDRQRRRFGFHVQAVGLDAGYFTPAICQGLEDRGIDGVMGYRTPNHKPGFFY KRDFRYSRYREEYTCPRGQVLRYSTTNRAGYQEFRSDPAQCGSCEVRNKCTTSANHVKVVIRHVWERAKEHVDARRLTDW GKAIYKRRKETVERSFADAKQLHGHRYARMRGLRKVAEQCLLGAAAQNIKKIALLVARLKACLRVPGSRPGVLHRLASAF LARFVRSGETHRTICLA
Sequences:
>Translated_497_residues MQHELEMVTLEELVPKDHLLRKIDAAVDFEFIREKVAHLYCADNGRPALDPVVMFKLLFVGYLFGVRSERQLMREVQVNV AYRWFARLRLTDRVPDASTFSQNRRRRFTDTTVYQEIFDAIVQQAIGRGMVEGRVLYTDSTHLKANANKRKFDLVQLEQT PSAYLAALDAAVDADRAAHDKKPLRRDGPQANDKGKNDDDTPGSSGTGEGKETKVSRTDPESGYMVRDDKPTGFFYLDHR TVDARYPIITDTHVTPASVHDSQPYLARLDRQRRRFGFHVQAVGLDAGYFTPAICQGLEDRGIDGVMGYRTPNHKPGFFY KRDFRYSRYREEYTCPRGQVLRYSTTNRAGYQEFRSDPAQCGSCEVRNKCTTSANHVKVVIRHVWERAKEHVDARRLTDW GKAIYKRRKETVERSFADAKQLHGHRYARMRGLRKVAEQCLLGAAAQNIKKIALLVARLKACLRVPGSRPGVLHRLASAF LARFVRSGETHRTICLA >Mature_497_residues MQHELEMVTLEELVPKDHLLRKIDAAVDFEFIREKVAHLYCADNGRPALDPVVMFKLLFVGYLFGVRSERQLMREVQVNV AYRWFARLRLTDRVPDASTFSQNRRRRFTDTTVYQEIFDAIVQQAIGRGMVEGRVLYTDSTHLKANANKRKFDLVQLEQT PSAYLAALDAAVDADRAAHDKKPLRRDGPQANDKGKNDDDTPGSSGTGEGKETKVSRTDPESGYMVRDDKPTGFFYLDHR TVDARYPIITDTHVTPASVHDSQPYLARLDRQRRRFGFHVQAVGLDAGYFTPAICQGLEDRGIDGVMGYRTPNHKPGFFY KRDFRYSRYREEYTCPRGQVLRYSTTNRAGYQEFRSDPAQCGSCEVRNKCTTSANHVKVVIRHVWERAKEHVDARRLTDW GKAIYKRRKETVERSFADAKQLHGHRYARMRGLRKVAEQCLLGAAAQNIKKIALLVARLKACLRVPGSRPGVLHRLASAF LARFVRSGETHRTICLA
Specific function: Unknown
COG id: COG3666
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56856; Mature: 56856
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHELEMVTLEELVPKDHLLRKIDAAVDFEFIREKVAHLYCADNGRPALDPVVMFKLLFV CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHH GYLFGVRSERQLMREVQVNVAYRWFARLRLTDRVPDASTFSQNRRRRFTDTTVYQEIFDA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHH IVQQAIGRGMVEGRVLYTDSTHLKANANKRKFDLVQLEQTPSAYLAALDAAVDADRAAHD HHHHHHCCCCCCCEEEEECCCEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCC KKPLRRDGPQANDKGKNDDDTPGSSGTGEGKETKVSRTDPESGYMVRDDKPTGFFYLDHR CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECE TVDARYPIITDTHVTPASVHDSQPYLARLDRQRRRFGFHVQAVGLDAGYFTPAICQGLED EECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHCCCHH RGIDGVMGYRTPNHKPGFFYKRDFRYSRYREEYTCPRGQVLRYSTTNRAGYQEFRSDPAQ CCCCCEECCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCC CGSCEVRNKCTTSANHVKVVIRHVWERAKEHVDARRLTDWGKAIYKRRKETVERSFADAK CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLHGHRYARMRGLRKVAEQCLLGAAAQNIKKIALLVARLKACLRVPGSRPGVLHRLASAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LARFVRSGETHRTICLA HHHHHHCCCCCCEEEEC >Mature Secondary Structure MQHELEMVTLEELVPKDHLLRKIDAAVDFEFIREKVAHLYCADNGRPALDPVVMFKLLFV CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHH GYLFGVRSERQLMREVQVNVAYRWFARLRLTDRVPDASTFSQNRRRRFTDTTVYQEIFDA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHH IVQQAIGRGMVEGRVLYTDSTHLKANANKRKFDLVQLEQTPSAYLAALDAAVDADRAAHD HHHHHHCCCCCCCEEEEECCCEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCC KKPLRRDGPQANDKGKNDDDTPGSSGTGEGKETKVSRTDPESGYMVRDDKPTGFFYLDHR CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECE TVDARYPIITDTHVTPASVHDSQPYLARLDRQRRRFGFHVQAVGLDAGYFTPAICQGLED EECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHCCCHH RGIDGVMGYRTPNHKPGFFYKRDFRYSRYREEYTCPRGQVLRYSTTNRAGYQEFRSDPAQ CCCCCEECCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCC CGSCEVRNKCTTSANHVKVVIRHVWERAKEHVDARRLTDWGKAIYKRRKETVERSFADAK CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLHGHRYARMRGLRKVAEQCLLGAAAQNIKKIALLVARLKACLRVPGSRPGVLHRLASAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LARFVRSGETHRTICLA HHHHHHCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA