| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is recX [H]
Identifier: 91790513
GI number: 91790513
Start: 4971944
End: 4972417
Strand: Reverse
Name: recX [H]
Synonym: Bpro_4684
Alternate gene names: 91790513
Gene position: 4972417-4971944 (Counterclockwise)
Preceding gene: 91790514
Following gene: 91790511
Centisome position: 95.62
GC content: 69.41
Gene sequence:
>474_bases ATGACTTCAGCCAAACCGGTGGCCCCGGCGGGCTTCAAGCTGTCGCTCAAGGGCCGCGCCCTGCGCTTGCTGGCGGCCCG CGAGCATTCGCGGGCCGAGCTGGAACGCAAGCTGGCACCCCACGAAGAAACGCCGGGCCAGCTGGCTCAGGTCCTCGATG ACCTGCAGGCCAAAGACTTCATCAGCGAAGCGCGGGTGGTCGAGTCGGTGATCAACCGGCGCGCCAGCCGCTACGGCGCG GCACGCATACGCCACGAGCTGCTGAACAAGGGGCTGGGCGCGGAGGTGGTGGCCGGGGCGATGGACAGCCTCAAAGGCAG CGAGCTGGAGCGCGCCCGCGACATCTGGCGCAAAAAGTTTGAGGGGCCGGCGCCCGACGCGGCCGGGCGAGCCAAGCAGA TGCGCTTTCTGGCGGCGCGGGGCTTTGGCGGCGAGGTCATTCGCCGCGTGGTGTCGCAGGCGGACGAGGACTAA
Upstream 100 bases:
>100_bases CCGGAATCTTAAGAGAAAGGGGTTGGTTGCTATGAAAATAGTAGCAAGTCGACGCCCTCCCCCGGCGGCACCTGTGCGCT GCGCCTGCTGACACCGACCC
Downstream 100 bases:
>100_bases GGCGCCCTTGAACCCCTACCCGATAAGAAAAAATGAGCTAGCCCAATCAACACGAGGGTAAGCAGCTACTGAATTAATAG CAAACGTGAGACTCTCTCTG
Product: regulatory protein RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MTSAKPVAPAGFKLSLKGRALRLLAAREHSRAELERKLAPHEETPGQLAQVLDDLQAKDFISEARVVESVINRRASRYGA ARIRHELLNKGLGAEVVAGAMDSLKGSELERARDIWRKKFEGPAPDAAGRAKQMRFLAARGFGGEVIRRVVSQADED
Sequences:
>Translated_157_residues MTSAKPVAPAGFKLSLKGRALRLLAAREHSRAELERKLAPHEETPGQLAQVLDDLQAKDFISEARVVESVINRRASRYGA ARIRHELLNKGLGAEVVAGAMDSLKGSELERARDIWRKKFEGPAPDAAGRAKQMRFLAARGFGGEVIRRVVSQADED >Mature_156_residues TSAKPVAPAGFKLSLKGRALRLLAAREHSRAELERKLAPHEETPGQLAQVLDDLQAKDFISEARVVESVINRRASRYGAA RIRHELLNKGLGAEVVAGAMDSLKGSELERARDIWRKKFEGPAPDAAGRAKQMRFLAARGFGGEVIRRVVSQADED
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
Organism=Escherichia coli, GI1789050, Length=162, Percent_Identity=33.3333333333333, Blast_Score=61, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 17210; Mature: 17079
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAKPVAPAGFKLSLKGRALRLLAAREHSRAELERKLAPHEETPGQLAQVLDDLQAKDF CCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH ISEARVVESVINRRASRYGAARIRHELLNKGLGAEVVAGAMDSLKGSELERARDIWRKKF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHC EGPAPDAAGRAKQMRFLAARGFGGEVIRRVVSQADED CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC >Mature Secondary Structure TSAKPVAPAGFKLSLKGRALRLLAAREHSRAELERKLAPHEETPGQLAQVLDDLQAKDF CCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH ISEARVVESVINRRASRYGAARIRHELLNKGLGAEVVAGAMDSLKGSELERARDIWRKKF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHC EGPAPDAAGRAKQMRFLAARGFGGEVIRRVVSQADED CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA