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The map label for this gene is sucC [H]

Identifier: 91790511

GI number: 91790511

Start: 4969335

End: 4970495

Strand: Reverse

Name: sucC [H]

Synonym: Bpro_4682

Alternate gene names: 91790511

Gene position: 4970495-4969335 (Counterclockwise)

Preceding gene: 91790513

Following gene: 91790510

Centisome position: 95.58

GC content: 60.38

Gene sequence:

>1161_bases
ATGAAAATTCACGAGTACCAAGGCAAGGAAATCTTGCGCAATTTTGGTGTGCCAGTGCCGCGGGGAATTCCTGCGTTCAC
CGTGCAGGAAGCGGTCGAAGCCGCACAAAAGCTCGGCGGCCCGGTCTGGGTGGTCAAGGCGCAGATCCATGCGGGAGGCC
GCGGCAAGGGCGGCGGCGTGAAGGTTGCCAAAACCATCGACGACGTCAAGCGCATTGCCGGTGAAATCCTCGGCATGCAG
CTGAAAACCCACCAGACCGGCCCTGAAGGCCAGAAAGTCCGCCGCCTCTATATTGAAGACGGCGCCGATATCCAGAAGGA
ATACTACGTGTCGGCCGTGACCGACCGCGAGTCGCAAAAGGTGGCTTTCATCGCTTCCAGCGAAGGCGGCATGGATATCG
AAGAGGTGGCCCATTCCAACCCTGAAAAAATCATCAAGGTGTTTGTCGACCCGCTGGTCGGCATGACAGACGCCCAGGCG
AAGGAAGTCGCCGCCGGCATCGGCATGCCTGCCGACTCCGTGGCGCAGACCGTCGACGTCCTGCAAAAGCTCTACAAGTG
TTACATGGAGACCGACGCGTCGCTGGTTGAAATCAACCCCCTGAACCGCAACAGCAAGGGCGAAATCATGGCCCTGGACG
CGAAGTTCAACTTCGACGCCAACGCGCTGTTCCGCCACCCTGAAATCGTGGCCTACCGCGACCTGGACGAGGAAGATCCT
GCCGAAGTTGAAGCCAGCAAGTTCGACCTGGCCTACATCAGCCTGGACGGCAACATCGGCTGCCTGGTCAATGGCGCCGG
TCTGGCCATGGCCACCATGGACACCATCAAGCTGTTCGGCGGCGAGCCGGCCAACTTCCTGGACGTGGGCGGCGGCGCCA
CCGCCGAGAAAGTCACCGAAGCCTTCAAGATCATGCTGAAGAACCCCGAGGTCAAGGGCATCCTGGTCAATATCTTCGGC
GGCATCATGAAGTGCGACACCATCGCCGACGGCGTCATCACCGCCTGCAAGGCCGTGAACCTGTCGGTTCCGCTGGTCGT
GCGCATGAAGGGCACCAACGAAGACCTGGGCAAGAAAATGCTGGCCGACTCCGGTCTGCCCATCATTGCCGCAGACACCA
TGGCCGAAGCCGCGACCAAAATCGTCGCCGCCGTCAAATGA

Upstream 100 bases:

>100_bases
TGACCGCTAACATGGCGTTTTGGGGCCTGTTTCCTATTTTCAACAGTCTCTTTCCAAATTCCTGTTGCACTCCTCTTTTA
CTGAATTCTGAAGGTTTTTC

Downstream 100 bases:

>100_bases
ACCACCCCCGAAGCGCCTTTGGCGCTCCCCCTTCAAGGGGGCGACCACATGCGGCCCGGCAAAGCCGGTTCCGCTGCGGT
CACTTGACAATAGCATTCAC

Product: succinyl-CoA synthetase subunit beta

Products: NA

Alternate protein names: Succinyl-CoA synthetase subunit beta; SCS-beta [H]

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKIHEYQGKEILRNFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHAGGRGKGGGVKVAKTIDDVKRIAGEILGMQ
LKTHQTGPEGQKVRRLYIEDGADIQKEYYVSAVTDRESQKVAFIASSEGGMDIEEVAHSNPEKIIKVFVDPLVGMTDAQA
KEVAAGIGMPADSVAQTVDVLQKLYKCYMETDASLVEINPLNRNSKGEIMALDAKFNFDANALFRHPEIVAYRDLDEEDP
AEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVGGGATAEKVTEAFKIMLKNPEVKGILVNIFG
GIMKCDTIADGVITACKAVNLSVPLVVRMKGTNEDLGKKMLADSGLPIIAADTMAEAATKIVAAVK

Sequences:

>Translated_386_residues
MKIHEYQGKEILRNFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHAGGRGKGGGVKVAKTIDDVKRIAGEILGMQ
LKTHQTGPEGQKVRRLYIEDGADIQKEYYVSAVTDRESQKVAFIASSEGGMDIEEVAHSNPEKIIKVFVDPLVGMTDAQA
KEVAAGIGMPADSVAQTVDVLQKLYKCYMETDASLVEINPLNRNSKGEIMALDAKFNFDANALFRHPEIVAYRDLDEEDP
AEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVGGGATAEKVTEAFKIMLKNPEVKGILVNIFG
GIMKCDTIADGVITACKAVNLSVPLVVRMKGTNEDLGKKMLADSGLPIIAADTMAEAATKIVAAVK
>Mature_386_residues
MKIHEYQGKEILRNFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHAGGRGKGGGVKVAKTIDDVKRIAGEILGMQ
LKTHQTGPEGQKVRRLYIEDGADIQKEYYVSAVTDRESQKVAFIASSEGGMDIEEVAHSNPEKIIKVFVDPLVGMTDAQA
KEVAAGIGMPADSVAQTVDVLQKLYKCYMETDASLVEINPLNRNSKGEIMALDAKFNFDANALFRHPEIVAYRDLDEEDP
AEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVGGGATAEKVTEAFKIMLKNPEVKGILVNIFG
GIMKCDTIADGVITACKAVNLSVPLVVRMKGTNEDLGKKMLADSGLPIIAADTMAEAATKIVAAVK

Specific function: Tricarboxylic acid cycle. [C]

COG id: COG0045

COG function: function code C; Succinyl-CoA synthetase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

Organism=Homo sapiens, GI11321583, Length=389, Percent_Identity=45.2442159383033, Blast_Score=341, Evalue=9e-94,
Organism=Homo sapiens, GI157779135, Length=378, Percent_Identity=46.2962962962963, Blast_Score=338, Evalue=7e-93,
Organism=Homo sapiens, GI294862256, Length=359, Percent_Identity=46.2395543175487, Blast_Score=322, Evalue=4e-88,
Organism=Escherichia coli, GI1786948, Length=386, Percent_Identity=51.8134715025907, Blast_Score=394, Evalue=1e-111,
Organism=Caenorhabditis elegans, GI17539378, Length=394, Percent_Identity=45.1776649746193, Blast_Score=343, Evalue=1e-94,
Organism=Caenorhabditis elegans, GI17567829, Length=390, Percent_Identity=45.6410256410256, Blast_Score=338, Evalue=2e-93,
Organism=Saccharomyces cerevisiae, GI6321683, Length=392, Percent_Identity=45.6632653061224, Blast_Score=348, Evalue=7e-97,
Organism=Drosophila melanogaster, GI21356231, Length=393, Percent_Identity=45.29262086514, Blast_Score=328, Evalue=3e-90,
Organism=Drosophila melanogaster, GI161078106, Length=385, Percent_Identity=45.1948051948052, Blast_Score=325, Evalue=4e-89,
Organism=Drosophila melanogaster, GI24645208, Length=385, Percent_Identity=45.1948051948052, Blast_Score=325, Evalue=4e-89,
Organism=Drosophila melanogaster, GI281361397, Length=386, Percent_Identity=45.3367875647668, Blast_Score=323, Evalue=2e-88,
Organism=Drosophila melanogaster, GI281361395, Length=386, Percent_Identity=45.3367875647668, Blast_Score=323, Evalue=2e-88,

Paralogues:

None

Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2361 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 3,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013650
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR005811
- InterPro:   IPR017866
- InterPro:   IPR005809
- InterPro:   IPR016102 [H]

Pfam domain/function: PF08442 ATP-grasp_2; PF00549 Ligase_CoA [H]

EC number: =6.2.1.5 [H]

Molecular weight: Translated: 41208; Mature: 41208

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS50975 ATP_GRASP ; PS01217 SUCCINYL_COA_LIG_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIHEYQGKEILRNFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHAGGRGKGGGV
CCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCE
KVAKTIDDVKRIAGEILGMQLKTHQTGPEGQKVRRLYIEDGADIQKEYYVSAVTDRESQK
EHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHEEEEEECCCCCCCHHHEEEEECCCCCCE
VAFIASSEGGMDIEEVAHSNPEKIIKVFVDPLVGMTDAQAKEVAAGIGMPADSVAQTVDV
EEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHH
LQKLYKCYMETDASLVEINPLNRNSKGEIMALDAKFNFDANALFRHPEIVAYRDLDEEDP
HHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEECCCCHHEECCCCEEEECCCCCCCC
AEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVGGGATAEKVTE
CCCCCCEEEEEEEEECCCEEEEEECCCEEEHHHHHHHCCCCCCCCEEECCCCCCHHHHHH
AFKIMLKNPEVKGILVNIFGGIMKCDTIADGVITACKAVNLSVPLVVRMKGTNEDLGKKM
HHHHHHCCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH
LADSGLPIIAADTMAEAATKIVAAVK
HHCCCCCEEEHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIHEYQGKEILRNFGVPVPRGIPAFTVQEAVEAAQKLGGPVWVVKAQIHAGGRGKGGGV
CCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCE
KVAKTIDDVKRIAGEILGMQLKTHQTGPEGQKVRRLYIEDGADIQKEYYVSAVTDRESQK
EHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHEEEEEECCCCCCCHHHEEEEECCCCCCE
VAFIASSEGGMDIEEVAHSNPEKIIKVFVDPLVGMTDAQAKEVAAGIGMPADSVAQTVDV
EEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHH
LQKLYKCYMETDASLVEINPLNRNSKGEIMALDAKFNFDANALFRHPEIVAYRDLDEEDP
HHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEECCCCHHEECCCCEEEECCCCCCCC
AEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVGGGATAEKVTE
CCCCCCEEEEEEEEECCCEEEEEECCCEEEHHHHHHHCCCCCCCCEEECCCCCCHHHHHH
AFKIMLKNPEVKGILVNIFGGIMKCDTIADGVITACKAVNLSVPLVVRMKGTNEDLGKKM
HHHHHHCCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH
LADSGLPIIAADTMAEAATKIVAAVK
HHCCCCCEEEHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA