| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yjbE [H]
Identifier: 91790509
GI number: 91790509
Start: 4967466
End: 4968167
Strand: Reverse
Name: yjbE [H]
Synonym: Bpro_4680
Alternate gene names: 91790509
Gene position: 4968167-4967466 (Counterclockwise)
Preceding gene: 91790510
Following gene: 91790508
Centisome position: 95.54
GC content: 60.11
Gene sequence:
>702_bases ATGTTTTTCGGCCTCGACTTAGCTTCCCCTCTTTTCTGGAGCGCCTTCGGCTCCATCATGATTGCCAACATTGTCCTGTC GGGCGACAACGCTGTGGTGATCGCCATGGCAGCCAGGACGCTGGAGCCGCATCAGCGCAGCAAAGCCATTTTCTGGGGCA GTGCCGCAGCCATCGTGATGCGTATCGTCCTGACGATTGTTGCCATCCAGTTGCTGACCCTGCCCTACCTGAAGATGATT GGCGCCGTCCTGCTGGTCTACATTGGCGTGGACCTGCTCAAGGGCGAGGAAGACGAAGACGGTGCGGGCCATGAAATCAA CGGCATGATGGCCGCCATCCGTACCATCCTGATTGCCGACCTGGTGATGAGCCTGGACAACGTGCTGGCCGTGGCCGCAG CCGCCAAGGGCAACCTGCCGTTGCTGGTACTGGGCCTGCTGGTGAGCATTCCGCTGATTATTTTCGGCGCGACGCTGCTG ACCAAGGTCATGGAGCGCTTTCCGATCATCATCACCATTGGTGCGGCACTGCTGGGATTCCTGGCAGGTGAGATGCTGCT GACCGATCCGGCTGTCACGGCCCAATTTGGCGCCGTCGGCGAGCAAATGGTGACGTTTGGCGGCATCCTCGGGGCTATCC TGGTCGTGGCGCTGGGGACTTACCTGACCAAGCGCCAGCAAAGCAAGCACTCTGCCACCTGA
Upstream 100 bases:
>100_bases AAGCAGTAATACGCATCGTGGTAAGCCCCAATGGGGCTTAGACTCACAAAAACAAAAAAGCGCTTTCCAGGCGCTTTTTT AATTCATAACAGGAGATCCC
Downstream 100 bases:
>100_bases GTTCAGGGGATGACCTGGCCCGTTCGCTGTTCAGCTGACGGGTCGGGGGCTTGTCAATCGGCCCTCAAATAGCCGGCGTG GCGGATCTCCCGCCACTTGC
Product: integral membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MFFGLDLASPLFWSAFGSIMIANIVLSGDNAVVIAMAARTLEPHQRSKAIFWGSAAAIVMRIVLTIVAIQLLTLPYLKMI GAVLLVYIGVDLLKGEEDEDGAGHEINGMMAAIRTILIADLVMSLDNVLAVAAAAKGNLPLLVLGLLVSIPLIIFGATLL TKVMERFPIIITIGAALLGFLAGEMLLTDPAVTAQFGAVGEQMVTFGGILGAILVVALGTYLTKRQQSKHSAT
Sequences:
>Translated_233_residues MFFGLDLASPLFWSAFGSIMIANIVLSGDNAVVIAMAARTLEPHQRSKAIFWGSAAAIVMRIVLTIVAIQLLTLPYLKMI GAVLLVYIGVDLLKGEEDEDGAGHEINGMMAAIRTILIADLVMSLDNVLAVAAAAKGNLPLLVLGLLVSIPLIIFGATLL TKVMERFPIIITIGAALLGFLAGEMLLTDPAVTAQFGAVGEQMVTFGGILGAILVVALGTYLTKRQQSKHSAT >Mature_233_residues MFFGLDLASPLFWSAFGSIMIANIVLSGDNAVVIAMAARTLEPHQRSKAIFWGSAAAIVMRIVLTIVAIQLLTLPYLKMI GAVLLVYIGVDLLKGEEDEDGAGHEINGMMAAIRTILIADLVMSLDNVLAVAAAAKGNLPLLVLGLLVSIPLIIFGATLL TKVMERFPIIITIGAALLGFLAGEMLLTDPAVTAQFGAVGEQMVTFGGILGAILVVALGTYLTKRQQSKHSAT
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022301 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 24501; Mature: 24501
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFGLDLASPLFWSAFGSIMIANIVLSGDNAVVIAMAARTLEPHQRSKAIFWGSAAAIVM CEECCCHHHHHHHHHHHHHHHHHHEECCCCEEEEEEHHHHCCHHHHCCEEEECHHHHHHH RIVLTIVAIQLLTLPYLKMIGAVLLVYIGVDLLKGEEDEDGAGHEINGMMAAIRTILIAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH LVMSLDNVLAVAAAAKGNLPLLVLGLLVSIPLIIFGATLLTKVMERFPIIITIGAALLGF HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LAGEMLLTDPAVTAQFGAVGEQMVTFGGILGAILVVALGTYLTKRQQSKHSAT HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFFGLDLASPLFWSAFGSIMIANIVLSGDNAVVIAMAARTLEPHQRSKAIFWGSAAAIVM CEECCCHHHHHHHHHHHHHHHHHHEECCCCEEEEEEHHHHCCHHHHCCEEEECHHHHHHH RIVLTIVAIQLLTLPYLKMIGAVLLVYIGVDLLKGEEDEDGAGHEINGMMAAIRTILIAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH LVMSLDNVLAVAAAAKGNLPLLVLGLLVSIPLIIFGATLLTKVMERFPIIITIGAALLGF HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LAGEMLLTDPAVTAQFGAVGEQMVTFGGILGAILVVALGTYLTKRQQSKHSAT HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]