| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91790496
Identifier: 91790496
GI number: 91790496
Start: 4955653
End: 4956102
Strand: Direct
Name: 91790496
Synonym: Bpro_4667
Alternate gene names: NA
Gene position: 4955653-4956102 (Clockwise)
Preceding gene: 91790495
Following gene: 91790497
Centisome position: 95.3
GC content: 60.89
Gene sequence:
>450_bases ATGGACAACATCATTGTTTATATTGACGATGCCGGCTATGCCCTGCACATGCTGCAACCCATGCTGCCAGAGGGCAACGC GCGCAGTCCGACCCGCTGGATTCTGGTGGCCTGCGCACCGCGCGTGACGCACCATGCCAGCAAATGGGTAACACACAGTG CGCGGGAGAGTTGGCGCGGCAAATGGGCGGCGAAAGTATTTGCGCAACTGGTGCCTCTCCTGCAAAAAGAGGGCAATACC GTGGTGACACGGATGGCCCAGACCACATTGACCACCCAGACGGAAGCCTTGATCAAGGAACATGGCGTTGCACGTGTGCT GGACGCCCGCCGACCCAAATTTGGCCAGGACCTGCAACCCGTCACGACCGAGCAGGCCCAGGAACACCACGGCGTGCTGG GCTATGCCGCAGCGCTGGCAAGCGCAGGGCTGCTGGTTGCGACAGATTGA
Upstream 100 bases:
>100_bases ATTGAAAGTGAAAGGCATCACCGAAGGCCACTGGGAGGTCCAGGGCTTTTTGTTTCACCCAGCGAAGCTTCTATAACCAC GATAACTGAAGGAGAACTTT
Downstream 100 bases:
>100_bases GCATTAAGCAAGGCTCCCGCGCCTCTCGCTTCATATGATGCACGGCCCCCGTAAGGGGGCTTTTTTCTGGGAGAAGCCCG GCTGAAGGCACTCGCCCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MDNIIVYIDDAGYALHMLQPMLPEGNARSPTRWILVACAPRVTHHASKWVTHSARESWRGKWAAKVFAQLVPLLQKEGNT VVTRMAQTTLTTQTEALIKEHGVARVLDARRPKFGQDLQPVTTEQAQEHHGVLGYAAALASAGLLVATD
Sequences:
>Translated_149_residues MDNIIVYIDDAGYALHMLQPMLPEGNARSPTRWILVACAPRVTHHASKWVTHSARESWRGKWAAKVFAQLVPLLQKEGNT VVTRMAQTTLTTQTEALIKEHGVARVLDARRPKFGQDLQPVTTEQAQEHHGVLGYAAALASAGLLVATD >Mature_149_residues MDNIIVYIDDAGYALHMLQPMLPEGNARSPTRWILVACAPRVTHHASKWVTHSARESWRGKWAAKVFAQLVPLLQKEGNT VVTRMAQTTLTTQTEALIKEHGVARVLDARRPKFGQDLQPVTTEQAQEHHGVLGYAAALASAGLLVATD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16387; Mature: 16387
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNIIVYIDDAGYALHMLQPMLPEGNARSPTRWILVACAPRVTHHASKWVTHSARESWRG CCCEEEEECCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCC KWAAKVFAQLVPLLQKEGNTVVTRMAQTTLTTQTEALIKEHGVARVLDARRPKFGQDLQP HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCC VTTEQAQEHHGVLGYAAALASAGLLVATD CCHHHHHHHCCHHHHHHHHHHCCEEEECC >Mature Secondary Structure MDNIIVYIDDAGYALHMLQPMLPEGNARSPTRWILVACAPRVTHHASKWVTHSARESWRG CCCEEEEECCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCC KWAAKVFAQLVPLLQKEGNTVVTRMAQTTLTTQTEALIKEHGVARVLDARRPKFGQDLQP HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCC VTTEQAQEHHGVLGYAAALASAGLLVATD CCHHHHHHHCCHHHHHHHHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA