| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91790493
Identifier: 91790493
GI number: 91790493
Start: 4953952
End: 4954386
Strand: Reverse
Name: 91790493
Synonym: Bpro_4664
Alternate gene names: NA
Gene position: 4954386-4953952 (Counterclockwise)
Preceding gene: 91790498
Following gene: 91790492
Centisome position: 95.27
GC content: 61.84
Gene sequence:
>435_bases ATGCCCGGCATCCACATCACTGACATCGAAGCCGCCATCAACTACTGGCGTGACAAAAAGCCATCACCCGATGGCGTGAC GCTGGCGCCTGAGCTGCGCGCGCTGGCCGAGGTTTATGCCCTGATGGTTTTCTACCATGAGGATGAGGCCGACGAAAAGA GCTTTCCGCCAAAAGCGCAGGCAGCCTGGCGCACCTGGTATGACACCACGGCCGATACGCCCTGCATCGCGATCTGTTCG ACCAGCCAGGGCGACTCGCTGTGCAAGGGATGTGGCCGGACCTTCGAGGAAGTGCAGCGCTGGCCTGAGATGACACCGGC CGAAAAACGCAGCACCTGGAGGCGCATTACGCTGGAAGCCACGGCGTGGCGCTTTGGCCGTTATGCGGACCGGGCGCTTG AAAAAGAGGTGGCACCCGTGCCGGAAAAGGGCTGA
Upstream 100 bases:
>100_bases AACGAGGAATGAGGTGTTTTGTCTGTGGCTGATAATGAACAGCTCGGCCTCGCTCGTAGCCCACCAGGCAGAAGCAGCCT TCGTTTTTTCTTCTTTCTTC
Downstream 100 bases:
>100_bases ACCTTTGTATGATTTCGGCGCTTTTCCCCCTGAAGGATGAAGAGGGGTAGCTATCAAGTTCATAGCAAAACGGGGTACAC TGGCGCATGCTCCGGTTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MPGIHITDIEAAINYWRDKKPSPDGVTLAPELRALAEVYALMVFYHEDEADEKSFPPKAQAAWRTWYDTTADTPCIAICS TSQGDSLCKGCGRTFEEVQRWPEMTPAEKRSTWRRITLEATAWRFGRYADRALEKEVAPVPEKG
Sequences:
>Translated_144_residues MPGIHITDIEAAINYWRDKKPSPDGVTLAPELRALAEVYALMVFYHEDEADEKSFPPKAQAAWRTWYDTTADTPCIAICS TSQGDSLCKGCGRTFEEVQRWPEMTPAEKRSTWRRITLEATAWRFGRYADRALEKEVAPVPEKG >Mature_143_residues PGIHITDIEAAINYWRDKKPSPDGVTLAPELRALAEVYALMVFYHEDEADEKSFPPKAQAAWRTWYDTTADTPCIAICST SQGDSLCKGCGRTFEEVQRWPEMTPAEKRSTWRRITLEATAWRFGRYADRALEKEVAPVPEKG
Specific function: Unknown
COG id: COG3313
COG function: function code R; Predicted Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16368; Mature: 16236
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGIHITDIEAAINYWRDKKPSPDGVTLAPELRALAEVYALMVFYHEDEADEKSFPPKAQ CCCCEECHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH AAWRTWYDTTADTPCIAICSTSQGDSLCKGCGRTFEEVQRWPEMTPAEKRSTWRRITLEA HHHHHHCCCCCCCCEEEEECCCCCHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHEEEEHH TAWRFGRYADRALEKEVAPVPEKG HHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PGIHITDIEAAINYWRDKKPSPDGVTLAPELRALAEVYALMVFYHEDEADEKSFPPKAQ CCCEECHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH AAWRTWYDTTADTPCIAICSTSQGDSLCKGCGRTFEEVQRWPEMTPAEKRSTWRRITLEA HHHHHHCCCCCCCCEEEEECCCCCHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHEEEEHH TAWRFGRYADRALEKEVAPVPEKG HHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA