| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is gpwA [H]
Identifier: 91790488
GI number: 91790488
Start: 4949961
End: 4950587
Strand: Direct
Name: gpwA [H]
Synonym: Bpro_4659
Alternate gene names: 91790488
Gene position: 4949961-4950587 (Clockwise)
Preceding gene: 91790485
Following gene: 91790489
Centisome position: 95.19
GC content: 60.13
Gene sequence:
>627_bases ATGCACAACCTGTGGACTCCCCTCTCCCGGCCACTGCCGCGAATTGCCCTGCTGACCGGCCTTGCGCTCTCGACAATCGC CGCGAACTCGGCAGCGCCGGCTCCGTCGGCATCGGTTGCCGGATCCGTTGCCGCAGACGCGTCGGCCTGCCCAGGCCTGT TGCAGCACAACTTCCTGCGACTGCAGGATGAAAAACCGCAATCGCTTTGCCAGTACCAGGGCAAGGTCGTGGTGGCGGTC AATACCGCCAGCTTTTGCGGTTTTACGTCCCAATACCAGGGCCTGGAAGAGCTTTATGCGAAATACAAGGACCGTGGGCT GGTGGTCCTGGGCTTTCCCTCCAACGACTTTTCGCAGGAAACCGGCAGCAACAAGGAGATTGCCGACTTTTGCGAAAACA CCTTCGGCGTGAAATTCCCGATGTTCGCCAAAACCAGCGTCAGCGGCAAGGACGCCAACCCCCTTTTCAGGCAGCTGGCC GCCAAAACCGGCACCACACCACGCTGGAACTTTTACAAGTATGTGATTGCGCGGGACGGCACCAGTGTCGCCAGCTTCAA CTCCCTGACCGCCCCAGGAAGCCGCCAGTTCGTCAAAGAAATCGAAAAGCAGCTGGCCCGCCCCTGA
Upstream 100 bases:
>100_bases CCGCGTACCCCGACGGCATGTGCCAGGTGCGAGCCGTGCTGGATGGCTACCGCGAACGCCAATAGCGCCATAATTGTTTG ACTCCAAAGGAATTTCTGGC
Downstream 100 bases:
>100_bases GCCCTTGGGTCGGTCAACCCTGACATAAAAATTACCATCTGGTCTCAATTTTGACTATGTGGTAATTTAACCCTTATGAT GGGGGAATGCGCAGACTTTG
Product: glutathione peroxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MHNLWTPLSRPLPRIALLTGLALSTIAANSAAPAPSASVAGSVAADASACPGLLQHNFLRLQDEKPQSLCQYQGKVVVAV NTASFCGFTSQYQGLEELYAKYKDRGLVVLGFPSNDFSQETGSNKEIADFCENTFGVKFPMFAKTSVSGKDANPLFRQLA AKTGTTPRWNFYKYVIARDGTSVASFNSLTAPGSRQFVKEIEKQLARP
Sequences:
>Translated_208_residues MHNLWTPLSRPLPRIALLTGLALSTIAANSAAPAPSASVAGSVAADASACPGLLQHNFLRLQDEKPQSLCQYQGKVVVAV NTASFCGFTSQYQGLEELYAKYKDRGLVVLGFPSNDFSQETGSNKEIADFCENTFGVKFPMFAKTSVSGKDANPLFRQLA AKTGTTPRWNFYKYVIARDGTSVASFNSLTAPGSRQFVKEIEKQLARP >Mature_208_residues MHNLWTPLSRPLPRIALLTGLALSTIAANSAAPAPSASVAGSVAADASACPGLLQHNFLRLQDEKPQSLCQYQGKVVVAV NTASFCGFTSQYQGLEELYAKYKDRGLVVLGFPSNDFSQETGSNKEIADFCENTFGVKFPMFAKTSVSGKDANPLFRQLA AKTGTTPRWNFYKYVIARDGTSVASFNSLTAPGSRQFVKEIEKQLARP
Specific function: Not Essential For B12 Transport; However, It Is An Auxiliary Component Of The Transport System. [C]
COG id: COG0386
COG function: function code O; Glutathione peroxidase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutathione peroxidase family [H]
Homologues:
Organism=Homo sapiens, GI15618997, Length=122, Percent_Identity=45.9016393442623, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI192455698, Length=118, Percent_Identity=39.8305084745763, Blast_Score=93, Evalue=1e-19, Organism=Homo sapiens, GI75709200, Length=170, Percent_Identity=33.5294117647059, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI90903240, Length=133, Percent_Identity=37.593984962406, Blast_Score=88, Evalue=5e-18, Organism=Homo sapiens, GI90903238, Length=115, Percent_Identity=40, Blast_Score=79, Evalue=2e-15, Organism=Homo sapiens, GI4557629, Length=146, Percent_Identity=34.9315068493151, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI41406084, Length=153, Percent_Identity=32.6797385620915, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI6006001, Length=164, Percent_Identity=29.8780487804878, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1788003, Length=170, Percent_Identity=35.8823529411765, Blast_Score=110, Evalue=5e-26, Organism=Caenorhabditis elegans, GI17535473, Length=143, Percent_Identity=38.4615384615385, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17506887, Length=146, Percent_Identity=36.986301369863, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71993584, Length=151, Percent_Identity=30.4635761589404, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI193210707, Length=148, Percent_Identity=38.5135135135135, Blast_Score=80, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17550320, Length=168, Percent_Identity=29.1666666666667, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193209493, Length=168, Percent_Identity=27.9761904761905, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6319721, Length=157, Percent_Identity=42.0382165605096, Blast_Score=124, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6322228, Length=149, Percent_Identity=41.6107382550336, Blast_Score=120, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6322826, Length=126, Percent_Identity=42.0634920634921, Blast_Score=107, Evalue=1e-24, Organism=Drosophila melanogaster, GI24656772, Length=145, Percent_Identity=37.2413793103448, Blast_Score=90, Evalue=9e-19, Organism=Drosophila melanogaster, GI24656777, Length=145, Percent_Identity=37.2413793103448, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI24656767, Length=145, Percent_Identity=37.2413793103448, Blast_Score=88, Evalue=4e-18, Organism=Drosophila melanogaster, GI85726443, Length=145, Percent_Identity=33.1034482758621, Blast_Score=78, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000889 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00255 GSHPx [H]
EC number: =1.11.1.9 [H]
Molecular weight: Translated: 22490; Mature: 22490
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNLWTPLSRPLPRIALLTGLALSTIAANSAAPAPSASVAGSVAADASACPGLLQHNFLR CCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHCCCCCCCHHHHHCCEE LQDEKPQSLCQYQGKVVVAVNTASFCGFTSQYQGLEELYAKYKDRGLVVLGFPSNDFSQE ECCCCHHHHHHHCCCEEEEEECHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHH TGSNKEIADFCENTFGVKFPMFAKTSVSGKDANPLFRQLAAKTGTTPRWNFYKYVIARDG CCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECC TSVASFNSLTAPGSRQFVKEIEKQLARP CCHHCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MHNLWTPLSRPLPRIALLTGLALSTIAANSAAPAPSASVAGSVAADASACPGLLQHNFLR CCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHCCCCCCCHHHHHCCEE LQDEKPQSLCQYQGKVVVAVNTASFCGFTSQYQGLEELYAKYKDRGLVVLGFPSNDFSQE ECCCCHHHHHHHCCCEEEEEECHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHH TGSNKEIADFCENTFGVKFPMFAKTSVSGKDANPLFRQLAAKTGTTPRWNFYKYVIARDG CCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECC TSVASFNSLTAPGSRQFVKEIEKQLARP CCHHCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA