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The map label for this gene is qseB [H]

Identifier: 91790461

GI number: 91790461

Start: 4913055

End: 4913774

Strand: Reverse

Name: qseB [H]

Synonym: Bpro_4632

Alternate gene names: 91790461

Gene position: 4913774-4913055 (Counterclockwise)

Preceding gene: 91790463

Following gene: 91790460

Centisome position: 94.49

GC content: 66.53

Gene sequence:

>720_bases
ATGCGCCGGAGCGTCGACAATAGGAATATGCGAATTCTCGTGGTCGAAGACGATGCCGGTATTGCCGCGGGGCTGCGGAC
CAATCTGCAGCAACGCGGCTATGCGGTCGATGTGTGCGACACGGTAGCGTCCGCCTGGATGGCCCTGTGCAGCGAGCCTT
TCGACCTGGTCCTGCTCGACCTTGGCCTGTCGGATGGGGACGGCGGCGATCTGTTGCAGCGTATCCGGCAGGTCAAAAGC
GCCGATGGCCGGCTGCCGGATCCGCTGACGCCGGTGCTCATCATGACGGCGCGCGACCAGGTGGCTGACCGTATTTCGGG
GCTGAACCTGGGCGCCGACGACTACCTCGTCAAGCCCTTTGACCTGGATGAACTGGAGGCCCGCATGCGCGCGCTGCTGC
GCCGCGCCGCGGGCCGCGCCCATCCCTTGCTGGTCCATGGCGAGCTGGTGATTGACCCCGCAGCCCGCACCGTGCTGCGC
GCCGGCCAGGCGGTCGAGCTGGCGCCCCGTGAATTCACCTTGCTGCTGCTCCTGCTGGAGTCGCGCGGCCGGGTGTTGTC
GCGCCAGCAGCTCGAAGCGCGCCTGTACAACTGGGAGGATGCGGTTGGCAGCAATGCGGTGGAGGTGCATGTCCACCATT
TGCGCCGCAAGCTGGGCGAGGGGCTGATCCAGACCCTGCGCGGCGTGGGTTATTTCATACCCCAGGATGACCGGGCATGA

Upstream 100 bases:

>100_bases
CCGGGGCGCCTTAACCAATCCTTAAGCTGGACAAGCCAATATGAGCTCAACATGAGCTACTTGAAGCAACCAAAGCACCC
AAGCATGCGGACGGCCGGCA

Downstream 100 bases:

>100_bases
AGCGTACGGCGAGCCGGCAGGCCTCGCTGACGCGTCGCCTGCTGCTGTGGGTGCTGGCAGCGCTGTTCCTGGTCTGGGGC
AGCTTCATCGTGGTCGGCTA

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MRRSVDNRNMRILVVEDDAGIAAGLRTNLQQRGYAVDVCDTVASAWMALCSEPFDLVLLDLGLSDGDGGDLLQRIRQVKS
ADGRLPDPLTPVLIMTARDQVADRISGLNLGADDYLVKPFDLDELEARMRALLRRAAGRAHPLLVHGELVIDPAARTVLR
AGQAVELAPREFTLLLLLLESRGRVLSRQQLEARLYNWEDAVGSNAVEVHVHHLRRKLGEGLIQTLRGVGYFIPQDDRA

Sequences:

>Translated_239_residues
MRRSVDNRNMRILVVEDDAGIAAGLRTNLQQRGYAVDVCDTVASAWMALCSEPFDLVLLDLGLSDGDGGDLLQRIRQVKS
ADGRLPDPLTPVLIMTARDQVADRISGLNLGADDYLVKPFDLDELEARMRALLRRAAGRAHPLLVHGELVIDPAARTVLR
AGQAVELAPREFTLLLLLLESRGRVLSRQQLEARLYNWEDAVGSNAVEVHVHHLRRKLGEGLIQTLRGVGYFIPQDDRA
>Mature_239_residues
MRRSVDNRNMRILVVEDDAGIAAGLRTNLQQRGYAVDVCDTVASAWMALCSEPFDLVLLDLGLSDGDGGDLLQRIRQVKS
ADGRLPDPLTPVLIMTARDQVADRISGLNLGADDYLVKPFDLDELEARMRALLRRAAGRAHPLLVHGELVIDPAARTVLR
AGQAVELAPREFTLLLLLLESRGRVLSRQQLEARLYNWEDAVGSNAVEVHVHHLRRKLGEGLIQTLRGVGYFIPQDDRA

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=226, Percent_Identity=48.2300884955752, Blast_Score=205, Evalue=2e-54,
Organism=Escherichia coli, GI1790552, Length=231, Percent_Identity=44.1558441558442, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1786784, Length=233, Percent_Identity=36.480686695279, Blast_Score=137, Evalue=7e-34,
Organism=Escherichia coli, GI1786911, Length=227, Percent_Identity=35.6828193832599, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1787375, Length=228, Percent_Identity=33.7719298245614, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1786599, Length=228, Percent_Identity=35.9649122807018, Blast_Score=121, Evalue=5e-29,
Organism=Escherichia coli, GI87082012, Length=227, Percent_Identity=35.6828193832599, Blast_Score=120, Evalue=6e-29,
Organism=Escherichia coli, GI1790860, Length=229, Percent_Identity=36.6812227074236, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1788394, Length=234, Percent_Identity=32.4786324786325, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI2367329, Length=236, Percent_Identity=36.4406779661017, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1789809, Length=244, Percent_Identity=31.5573770491803, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1787229, Length=236, Percent_Identity=31.7796610169492, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1790863, Length=234, Percent_Identity=26.4957264957265, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1790437, Length=125, Percent_Identity=36, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1788550, Length=115, Percent_Identity=32.1739130434783, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI145693140, Length=242, Percent_Identity=26.8595041322314, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1790299, Length=113, Percent_Identity=35.3982300884956, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26456; Mature: 26456

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSVDNRNMRILVVEDDAGIAAGLRTNLQQRGYAVDVCDTVASAWMALCSEPFDLVLLD
CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCCEEEEEE
LGLSDGDGGDLLQRIRQVKSADGRLPDPLTPVLIMTARDQVADRISGLNLGADDYLVKPF
ECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCEECCC
DLDELEARMRALLRRAAGRAHPLLVHGELVIDPAARTVLRAGQAVELAPREFTLLLLLLE
CHHHHHHHHHHHHHHHCCCCCEEEEECEEEECHHHHHHHHCCCCEEECCHHHHHHHHHHH
SRGRVLSRQQLEARLYNWEDAVGSNAVEVHVHHLRRKLGEGLIQTLRGVGYFIPQDDRA
HCCCHHHHHHHHHHHHCCHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCEEECCCCCCC
>Mature Secondary Structure
MRRSVDNRNMRILVVEDDAGIAAGLRTNLQQRGYAVDVCDTVASAWMALCSEPFDLVLLD
CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCCEEEEEE
LGLSDGDGGDLLQRIRQVKSADGRLPDPLTPVLIMTARDQVADRISGLNLGADDYLVKPF
ECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCEECCC
DLDELEARMRALLRRAAGRAHPLLVHGELVIDPAARTVLRAGQAVELAPREFTLLLLLLE
CHHHHHHHHHHHHHHHCCCCCEEEEECEEEECHHHHHHHHCCCCEEECCHHHHHHHHHHH
SRGRVLSRQQLEARLYNWEDAVGSNAVEVHVHHLRRKLGEGLIQTLRGVGYFIPQDDRA
HCCCHHHHHHHHHHHHCCHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]