| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is ptsN [H]
Identifier: 91790441
GI number: 91790441
Start: 4891933
End: 4892406
Strand: Reverse
Name: ptsN [H]
Synonym: Bpro_4612
Alternate gene names: 91790441
Gene position: 4892406-4891933 (Counterclockwise)
Preceding gene: 91790442
Following gene: 91790440
Centisome position: 94.08
GC content: 58.86
Gene sequence:
>474_bases ATGAACCGTCTTTCGCAAATTTTGCCCCCCTCTCAAGTGCTGGTCAGTGTTGAAGCAACCAGCAAAAAGCGTGCTTTTGA AGAAGCCGGTCTGTTGTTTGAGAACCAGCACGGTCTGAATCGCGCGCTGATCACCGACAGCCTGTTCGCGCGTGAGCGCC TGGGCTCGACCGGTCTTGGCCATGGCGTGGCCATTCCGCATGGCCGCATCAAGGGCCTGAAGGCCCCGATGGCCGCAGTT TTCCAGCTGCAGGCCCCCATCGGTTTCGATGCGCCCGATGAGCAGCCCGTCGGTTTGCTGATTTTTCTGCTGGTGCCGGA GGCCGCCACGCAAAAACACCTTGAAATCCTCTCTGAAATTGCCGAGCTGCTCAGTGACAGCACGCTGCGCGAGCAGCTCA AGACGAGCACGGATGCTGCGGCGCTACACCACCTGATTGCATCGTGGCACTCTGTCCATGAAGTCAGCTCCTAG
Upstream 100 bases:
>100_bases GTGTTCTGACGAGCCGCTTGTACGCGCAAGCGGCTTTTTTATGCCCCTTCTGCCTTCAAACCCGCTGTAAAGTGCATAAT TCGGCGACTAAAAGATCGTT
Downstream 100 bases:
>100_bases GTTGGGGCGGTTTGAGTCGTGATCTTGAGTAACAGGCCGGCATGAAGCCCACCGTTGTCAGCGCAGACGTTCTGTTTGAG GACCACCGCGCCGCCCTGAA
Product: PTS IIA-like protein nitrogen-regulatory protein PtsN
Products: protein histidine; sugarphosphate [C]
Alternate protein names: Enzyme IIA-NTR; Phosphotransferase enzyme IIA component; PTS system EIIA component [H]
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MNRLSQILPPSQVLVSVEATSKKRAFEEAGLLFENQHGLNRALITDSLFARERLGSTGLGHGVAIPHGRIKGLKAPMAAV FQLQAPIGFDAPDEQPVGLLIFLLVPEAATQKHLEILSEIAELLSDSTLREQLKTSTDAAALHHLIASWHSVHEVSS
Sequences:
>Translated_157_residues MNRLSQILPPSQVLVSVEATSKKRAFEEAGLLFENQHGLNRALITDSLFARERLGSTGLGHGVAIPHGRIKGLKAPMAAV FQLQAPIGFDAPDEQPVGLLIFLLVPEAATQKHLEILSEIAELLSDSTLREQLKTSTDAAALHHLIASWHSVHEVSS >Mature_157_residues MNRLSQILPPSQVLVSVEATSKKRAFEEAGLLFENQHGLNRALITDSLFARERLGSTGLGHGVAIPHGRIKGLKAPMAAV FQLQAPIGFDAPDEQPVGLLIFLLVPEAATQKHLEILSEIAELLSDSTLREQLKTSTDAAALHHLIASWHSVHEVSS
Specific function: Seems to have a role in regulating nitrogen assimilation [H]
COG id: COG1762
COG function: function code GT; Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIA type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1789597, Length=147, Percent_Identity=38.7755102040816, Blast_Score=99, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR006320 [H]
Pfam domain/function: PF00359 PTS_EIIA_2 [H]
EC number: 2.7.1.69 [C]
Molecular weight: Translated: 16982; Mature: 16982
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00372 PTS_EIIA_TYPE_2_HIS ; PS51094 PTS_EIIA_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLSQILPPSQVLVSVEATSKKRAFEEAGLLFENQHGLNRALITDSLFARERLGSTGLG CCCHHHHCCCHHHEEEECHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHCCCCCCC HGVAIPHGRIKGLKAPMAAVFQLQAPIGFDAPDEQPVGLLIFLLVPEAATQKHLEILSEI CCEECCCCHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHEEEEEECCCHHHHHHHHHHHHH AELLSDSTLREQLKTSTDAAALHHLIASWHSVHEVSS HHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNRLSQILPPSQVLVSVEATSKKRAFEEAGLLFENQHGLNRALITDSLFARERLGSTGLG CCCHHHHCCCHHHEEEECHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHCCCCCCC HGVAIPHGRIKGLKAPMAAVFQLQAPIGFDAPDEQPVGLLIFLLVPEAATQKHLEILSEI CCEECCCCHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHEEEEEECCCHHHHHHHHHHHHH AELLSDSTLREQLKTSTDAAALHHLIASWHSVHEVSS HHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Protein Npi-phosphohistidine; sugar [C]
Specific reaction: Protein Npi-phosphohistidine + sugar = protein histidine + sugarphosphate [C]
General reaction: Phospho group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]