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The map label for this gene is exbD1 [H]

Identifier: 91790435

GI number: 91790435

Start: 4887541

End: 4887969

Strand: Reverse

Name: exbD1 [H]

Synonym: Bpro_4606

Alternate gene names: 91790435

Gene position: 4887969-4887541 (Counterclockwise)

Preceding gene: 91790436

Following gene: 91790434

Centisome position: 93.99

GC content: 65.73

Gene sequence:

>429_bases
ATGGGATTTGGCCGACTCGAACGCATCCAGGGCCCGCAGCCCATGAGCGATATCAATGTCACGCCGCTGGTGGACGTGAT
GCTGGTGCTGGTGGTCATTTTCATCATCACGGCGCCCTTGCTGGCCAGCACCATCCGGCTCGACCTGCCCAAGGCCGAGG
GGGCCCAGTCGAGTGACGTGCCCCGGTTTGTCACGCTGGTGGTCGACAAATCGGGCCAGGTCTTTCTGAACGACAAGCCC
GTGAAGCTGGACGAGCTGGCGCGGGACCTGGCGCAAACCGCGGGCCGCAACCCCGATACCGAGGTGCAGTTGCGCGCCGA
TGAGGCCGTGCCCTACGGCCGGGTGGTGGAGGTGATGGGTGTGGCGCAAAAAGCCGGGCTCAGCCGCATCGGTTTTGTCG
CCGAGCCCAAGCCCGCAGCGCGCCCGTAA

Upstream 100 bases:

>100_bases
TTGGCCGCATCGAAGCCGACCTGGAAGGGTTTGCGCGCGATTTGCGGGAGTTGCTGGCGGGCCATCGGGGCTGAGCCCTC
AAACCAGGAACGCATGCACC

Downstream 100 bases:

>100_bases
AATTACGGCCAGCCACCATTTCTGAAGATCTGGAAAAAGCGACGGGGCTGCCCGGCTTTTTTCACTGTTGTTAACCGCCC
CTTTTACCGCCCGAACTTAT

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MGFGRLERIQGPQPMSDINVTPLVDVMLVLVVIFIITAPLLASTIRLDLPKAEGAQSSDVPRFVTLVVDKSGQVFLNDKP
VKLDELARDLAQTAGRNPDTEVQLRADEAVPYGRVVEVMGVAQKAGLSRIGFVAEPKPAARP

Sequences:

>Translated_142_residues
MGFGRLERIQGPQPMSDINVTPLVDVMLVLVVIFIITAPLLASTIRLDLPKAEGAQSSDVPRFVTLVVDKSGQVFLNDKP
VKLDELARDLAQTAGRNPDTEVQLRADEAVPYGRVVEVMGVAQKAGLSRIGFVAEPKPAARP
>Mature_141_residues
GFGRLERIQGPQPMSDINVTPLVDVMLVLVVIFIITAPLLASTIRLDLPKAEGAQSSDVPRFVTLVVDKSGQVFLNDKPV
KLDELARDLAQTAGRNPDTEVQLRADEAVPYGRVVEVMGVAQKAGLSRIGFVAEPKPAARP

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=142, Percent_Identity=33.8028169014084, Blast_Score=79, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15300; Mature: 15169

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFGRLERIQGPQPMSDINVTPLVDVMLVLVVIFIITAPLLASTIRLDLPKAEGAQSSDV
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PRFVTLVVDKSGQVFLNDKPVKLDELARDLAQTAGRNPDTEVQLRADEAVPYGRVVEVMG
CEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHH
VAQKAGLSRIGFVAEPKPAARP
HHHHCCCHHCCCCCCCCCCCCC
>Mature Secondary Structure 
GFGRLERIQGPQPMSDINVTPLVDVMLVLVVIFIITAPLLASTIRLDLPKAEGAQSSDV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PRFVTLVVDKSGQVFLNDKPVKLDELARDLAQTAGRNPDTEVQLRADEAVPYGRVVEVMG
CEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHH
VAQKAGLSRIGFVAEPKPAARP
HHHHCCCHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371459 [H]